| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16764987
Identifier: 16764987
GI number: 16764987
Start: 1736039
End: 1736488
Strand: Reverse
Name: 16764987
Synonym: STM1643
Alternate gene names: NA
Gene position: 1736488-1736039 (Counterclockwise)
Preceding gene: 16764988
Following gene: 161353597
Centisome position: 35.75
GC content: 50.0
Gene sequence:
>450_bases ATGACGTCTGAAAAATTATCTGCTGCCTGCCATTGTGGCAGCGTCGTGTTTACCGTTCAACTTAGCGATGGCTTTCATAC CGCCAGGCGCTGCAACTGTTCCTTTTGCAGGATGCGCGGAGCGGTGGCAGTGTCTGCGCCGCTGTCGGGTATTAAAGTGC TAAAAGGGCAGGATAAGCTTACCGAATATCGCTTCAATACGGGCAAGGCGGTGCATTTTTTCTGTTCGGTATGCGGGATA TATACTTTTCATCAGCGTCGATCCAATCCCGATCAATATGGGGTCAATGTGGCGTGCATCGAAAATATGTCGCCTTTTGA TTTCGCCTGCGTTGAAGTCAATGATGGGGTAACGCATCCCAGCGATGGCGGCAGTAGCGGCGTGGTAGGATATTTGCGCT ACAAACCTAAGAAGTCACCTCCCGTCGAAACGGGAGGCAAAAATATTTAA
Upstream 100 bases:
>100_bases TGGGTAATTTCTGAATACGAAGGTCGTATTTACATTAGGCGAACCGGAAGGCTATTTCTATACTGTTGGCTGGTATCACT ATTCGCGAGAGTAACCAGGT
Downstream 100 bases:
>100_bases GCGGCCACGACGCTGTCAATCGCGGCTTTTGCATCGGCCTGGGCTTTAGCTGCCACTTCCGGCCCGTAGGCGATGCCTTC GGCAAAGACAAAATTCACGT
Product: inner membrane protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein; Gfa-Like Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Inner Membrane Protein
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTSEKLSAACHCGSVVFTVQLSDGFHTARRCNCSFCRMRGAVAVSAPLSGIKVLKGQDKLTEYRFNTGKAVHFFCSVCGI YTFHQRRSNPDQYGVNVACIENMSPFDFACVEVNDGVTHPSDGGSSGVVGYLRYKPKKSPPVETGGKNI
Sequences:
>Translated_149_residues MTSEKLSAACHCGSVVFTVQLSDGFHTARRCNCSFCRMRGAVAVSAPLSGIKVLKGQDKLTEYRFNTGKAVHFFCSVCGI YTFHQRRSNPDQYGVNVACIENMSPFDFACVEVNDGVTHPSDGGSSGVVGYLRYKPKKSPPVETGGKNI >Mature_148_residues TSEKLSAACHCGSVVFTVQLSDGFHTARRCNCSFCRMRGAVAVSAPLSGIKVLKGQDKLTEYRFNTGKAVHFFCSVCGIY TFHQRRSNPDQYGVNVACIENMSPFDFACVEVNDGVTHPSDGGSSGVVGYLRYKPKKSPPVETGGKNI
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56118234, Length=110, Percent_Identity=38.1818181818182, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI25149380, Length=104, Percent_Identity=40.3846153846154, Blast_Score=81, Evalue=2e-16, Organism=Caenorhabditis elegans, GI25149382, Length=97, Percent_Identity=42.2680412371134, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16138; Mature: 16006
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSEKLSAACHCGSVVFTVQLSDGFHTARRCNCSFCRMRGAVAVSAPLSGIKVLKGQDKL CCCCHHHHHEECCEEEEEEEECCCCCCHHHCCCHHHHHCCCEEEECCCCCEEEECCCCCC TEYRFNTGKAVHFFCSVCGIYTFHQRRSNPDQYGVNVACIENMSPFDFACVEVNDGVTHP EEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCEEEEEEECCCCCCC SDGGSSGVVGYLRYKPKKSPPVETGGKNI CCCCCCCEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure TSEKLSAACHCGSVVFTVQLSDGFHTARRCNCSFCRMRGAVAVSAPLSGIKVLKGQDKL CCCHHHHHEECCEEEEEEEECCCCCCHHHCCCHHHHHCCCEEEECCCCCEEEECCCCCC TEYRFNTGKAVHFFCSVCGIYTFHQRRSNPDQYGVNVACIENMSPFDFACVEVNDGVTHP EEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCEEEEEEECCCCCCC SDGGSSGVVGYLRYKPKKSPPVETGGKNI CCCCCCCEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA