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The map label for this gene is hrpA [H]

Identifier: 161353597

GI number: 161353597

Start: 1731334

End: 1735179

Strand: Reverse

Name: hrpA [H]

Synonym: STM1641

Alternate gene names: 161353597

Gene position: 1735179-1731334 (Counterclockwise)

Preceding gene: 16764987

Following gene: 16764984

Centisome position: 35.72

GC content: 53.77

Gene sequence:

>3846_bases
ATGCTGCGCGACAAACAGCGCTTTGCGCGCCGCCTGCATGGCGTAAAGAAAGTAAAAAATCCTGATGCGCAACAGGCCAT
TTTCCAGACGATGGCGAAAGAAATTGAACAGGCTGCGGCGCAGGTCGCCCTCCGCGAAGCGGCGCGCCCCTCAATCACTT
ATCCGCAAAATTTGCCTGTTAGCCAGAAGAAACAGGACATTCTGGAAGCGATCCGCGATCATCAGGTGGTGATCGTGGCA
GGGGAAACCGGTTCCGGTAAAACCACCCAGTTGCCGAAAATTTGTATGGAACTGGGACGCGGAATTAAAGGACTTATTGG
ACATACTCAACCGCGTCGTCTGGCGGCGCGCACCGTCGCTAACCGCATTGCCGAAGAGTTGCAAACGGAGCCTGGCGGCT
GCATCGGCTATAAAGTTCGTTTCAGCGATCATGTCAGTAGCAACACCATGGTCAAACTGATGACGGACGGTATCCTGCTG
GCGGAAATCCAGCAGGACAGGCTATTGATGCAGTATGACACCCTCATTATTGATGAAGCGCATGAACGCAGCCTGAATAT
TGACTTCTTGCTCGGCTATCTGAAAGAACTTCTGCCGCGTCGCCCCGATCTGAAAGTGATTATTACCTCTGCGACCATCG
ACCCGGAACGCTTCTCGCGCCACTTTAATAACGCGCCGATTATCGAAGTCTCTGGCCGAACGTATCCCGTAGAAGTTCGT
TATCGCCCCATTGTGGAAGAGGCTGACGACACTGAACGCGATCAGCTACAGGCAATTTTCGATGCTGTCGATGAACTGGG
GCGTGAAAGTCCCGGCGATATTCTGATTTTTATGAGCGGAGAGCGGGAAATCCGCGATACCGCCGACGCCCTGAACAAGC
TGAACTTACGGCATACCGAAGTGTTGCCGCTGTATGCACGCTTGTCGAACAGCGAACAGAACCGCGTTTTCCAGTCGCAC
AGCGGACGCCGTATCGTGCTGGCGACTAACGTGGCGGAAACCTCGCTGACGGTGCCGGGTATCAAGTATGTGATCGATCC
TGGCACTGCGCGCATCAGCCGCTACAGCTACCGCACTAAAGTGCAGCGCCTGCCGATTGAACCGATCTCACAGGCTTCCG
CCAACCAGCGTAAAGGGCGTTGCGGGCGCGTATCGGAAGGGATTTGCATTCGTCTGTATTCGGAAGATGACTTTTTGTCA
CGTCCGGAATTTACCGACCCGGAAATTCTACGTACCAACCTGGCGTCGGTTATTTTGCAGATGACCGCCCTGGGGCTGGG
TGACATTGCCGCCTTCCCGTTTGTCGAAGCGCCGGATAAGCGCAATATTCAGGATGGCGTGCGTTTGTTGGAAGAGCTGG
GGGCGATTACCGCCGACGAACAGCAAACGGCATATAAGCTGACGCCACTGGGCCGACAATTATCCCAGTTGCCGGTCGAC
CCGCGCCTGGCGCGTATGGTTCTGGAAGCGCAAAAACATGGCTGTGTGCGCGAAGCGATGATCATTACTTCCGCACTCTC
TATTCAGGATCCGCGCGAGCGCCCAGTGGATAAGCAGCAGGCTTCCGATGAGAAACACCGGCGTTTCCATGATAAGGAAT
CCGATTTTCTGGCGTTTGTTAACCTGTGGAATTACCTCGGCGAGCAACAAAAGGCCCTGTCGTCGAATCAATTCCGCCGT
CTGTGTCGCACCGACTATCTGAACTATTTACGCGTGCGTGAGTGGCAGGATATCTATACCCAACTGCGTCAGGTGGTAAA
AGAACTGGGGATTCCGGTAAACAGCGAACCCGCAGAGTACCGGGAAATTCACGTTGCGTTGTTAACGGGACTGTTGTCGC
ATATCGGGATGAAAGATGCCGATAAACAAGAGTACACCGGCGCGCGTAACGCCCGATTCTCTATTTTCCCCGGTTCCGGT
TTATTCAAAAAACCGCCGAAATGGACAATGGTCGCAGAACTGGTGGAGACCAGCCGCCTGTGGGGGCGCATCGCTGCCCG
CATTGAGCCAGAATGGGTGGAACCGGTAGCCCAGCACCTGATTAAACGTTCATATAGCGAACCGCACTGGGAGCGGGCGC
AAGGCGCGGTGATGGCGACGGAAAAGGTTACTGTCTACGGTCTGCCGATTGTCGCCGCGCGCAAAGTGAATTACAGCCAG
ATTGACCCGGCGTTGTGTCGCGAGTTGTTTATCCGCCATGCGCTGGTGGAGGGGGACTGGCAAACCCGTCACGCCTTCTT
CCGTGAGAATCTAAAATTGCGTGCGGAAGTCGAGGAACTTGAGCACAAATCTCGCCGCCGCGATATCCTGGTGGATGACG
ATACCCTGTTTGAGTTTTATGACCAGCGTATTAGCCATGACGTTATTTCCGCCCGCCACTTTGATAGTTGGTGGAAAAAA
ATCAGCCGCGAGACGCCGGATCTGCTCAACTTTGAAAAAAGTATGCTGATTAAAGAAGGCGCGGAAAAAATCAGCAAACT
GGATTACCCGAACTTCTGGCACCAGGGCAATCTTAAGCTGCGTTTGAGCTATCAGTTTGAACCGGGCGCGGATGCTGACG
GCGTGACCGTCCATATTCCGTTGCCGCTACTTAACCAGGTTGACGAGAGCGGTTTTGAATGGCAGATCCCAGGGCTGCGC
CGTGAATTAGTTATTGCGCTGATTAAATCGTTGCCAAAACCGGTACGTCGCAACTTTGTTCCGGCGCCAAACTATGCTGA
AGCGTTTTTAGGTCGCGTAACGCCGCTGGAGCTGCCGCTGCTGGACGCTCTGGAGCGTGAACTGCGCCGGATGACCGGCG
TCACGGTCGATCGGGAAGACTGGCATTGGGATCAGGTGCCCGAGCATCTGAAAATCACGTTTCGCGTGGTGAATGACAAA
AACAAGAAACTGCAGGAAGGGCGTTCGCTCGCCGAGCTTAAAAATGCGCTGAAAGGCAAAGTGCAGGAGACGCTCTCGGC
GGTGGCGGATGACGGCATCGAGCAGAGCGGGCTGCATATCTGGAGTTTCGGCGAGCTGCCGGAAAGCTACGAACAGAAAC
GCGGTAATTATAAAGTGAAGGCGTGGCCGGCGTTAGTGGATGAGCGTGACAGCGTCGCTATCAAATTGTTTGATAATCCG
CTGGAACAACAACAGGCGATGTGGTGCGGTTTACGCCGTCTGTTGTTGCTCAATATTCCTTCACCGATTAAGTATCTGCA
TGAGAAATTGCCGAATAAAGCCAAGCTGGGGCTGTACTTTAACCCGTACGGCAAAGTACTGGAGTTGATTGATGACTGTA
TCGCCTGCGGGGTAGATAAGCTGATAGATGCCAACGGCGGACCGGTGTGGAGCGAAGCAGGTTTCACCGCGCTGCACGAA
AAGGTACGCGCCGAGCTGAATGATACTGTGGTGGATATCGCGAAGCAGGTCGAGCGGATCCTGACGACCGTATTCAATAT
CAATAAGCGTCTGAAAGGGCGGGTGGATATGAGCATGGCGTTGGGGCTTTCCGATATCAAGGCGCAGATGAGCGGTCTGG
TATACCGTGGTTTTGTGACTGGCAACGGCTTTAAACGTCTCGGCGATACGCTGCGTTATCTGCAGGCAATTGAAAAGCGG
CTGGAGAAACTGGCTGTCGATCCGCACCGCGATCGGGCGCAAATGCTGAAAGTCGAAAGCGTCCAGCAGGCGTGGCAACA
ATGGATAAATAAATTGCCTCCAGCGCGTCGCGAAGATGATGATGTTAAAGAGATCCGTTGGATGATTGAAGAACTGCGTG
TCAGTTATTTCGCCCAACAGCTCGGTACGCCTTATCCTATTTCCGATAAGCGTATTTTACAGGCCATGGATCAGATTACG
GCCTAA

Upstream 100 bases:

>100_bases
TTTAAAACGATTTTAAACAGGCAGAATCCTGCCCAAGAGCTTTATGACTGAACAATCTACGTTGACGCTTCAGGTGTTAC
AGCAGCGGCTGGATGCACTG

Downstream 100 bases:

>100_bases
AAAGCCAGGCGACGACGTCTTTCAAAGCGATCCGGTACAAGTTCGGAACAAAAAGGAGGAATTATGAATACAACGCCATT
TCCGGCGCTCTCTGCGGAAA

Product: ATP-dependent RNA helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1281; Mature: 1281

Protein sequence:

>1281_residues
MLRDKQRFARRLHGVKKVKNPDAQQAIFQTMAKEIEQAAAQVALREAARPSITYPQNLPVSQKKQDILEAIRDHQVVIVA
GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSSNTMVKLMTDGILL
AEIQQDRLLMQYDTLIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLNLRHTEVLPLYARLSNSEQNRVFQSH
SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS
RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITADEQQTAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPVDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRR
LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHVALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG
LFKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDTLFEFYDQRISHDVISARHFDSWWKK
ISRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLR
RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVTVDREDWHWDQVPEHLKITFRVVNDK
NKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQSGLHIWSFGELPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP
LEQQQAMWCGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDKLIDANGGPVWSEAGFTALHE
KVRAELNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
LEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPARREDDDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMDQIT
A

Sequences:

>Translated_1281_residues
MLRDKQRFARRLHGVKKVKNPDAQQAIFQTMAKEIEQAAAQVALREAARPSITYPQNLPVSQKKQDILEAIRDHQVVIVA
GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSSNTMVKLMTDGILL
AEIQQDRLLMQYDTLIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLNLRHTEVLPLYARLSNSEQNRVFQSH
SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS
RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITADEQQTAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPVDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRR
LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHVALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG
LFKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDTLFEFYDQRISHDVISARHFDSWWKK
ISRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLR
RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVTVDREDWHWDQVPEHLKITFRVVNDK
NKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQSGLHIWSFGELPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP
LEQQQAMWCGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDKLIDANGGPVWSEAGFTALHE
KVRAELNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
LEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPARREDDDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMDQIT
A
>Mature_1281_residues
MLRDKQRFARRLHGVKKVKNPDAQQAIFQTMAKEIEQAAAQVALREAARPSITYPQNLPVSQKKQDILEAIRDHQVVIVA
GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSSNTMVKLMTDGILL
AEIQQDRLLMQYDTLIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLNLRHTEVLPLYARLSNSEQNRVFQSH
SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS
RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITADEQQTAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPVDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRR
LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHVALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG
LFKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDTLFEFYDQRISHDVISARHFDSWWKK
ISRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLR
RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVTVDREDWHWDQVPEHLKITFRVVNDK
NKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQSGLHIWSFGELPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP
LEQQQAMWCGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDKLIDANGGPVWSEAGFTALHE
KVRAELNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
LEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPARREDDDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMDQIT
A

Specific function: Not yet known [H]

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI4826690, Length=640, Percent_Identity=37.03125, Blast_Score=416, Evalue=1e-116,
Organism=Homo sapiens, GI68509926, Length=644, Percent_Identity=35.2484472049689, Blast_Score=404, Evalue=1e-112,
Organism=Homo sapiens, GI256000749, Length=650, Percent_Identity=35.6923076923077, Blast_Score=397, Evalue=1e-110,
Organism=Homo sapiens, GI255982614, Length=647, Percent_Identity=35.8578052550232, Blast_Score=397, Evalue=1e-110,
Organism=Homo sapiens, GI20544129, Length=655, Percent_Identity=34.5038167938931, Blast_Score=388, Evalue=1e-107,
Organism=Homo sapiens, GI20336302, Length=660, Percent_Identity=33.9393939393939, Blast_Score=380, Evalue=1e-105,
Organism=Homo sapiens, GI17999539, Length=687, Percent_Identity=35.2256186317322, Blast_Score=379, Evalue=1e-105,
Organism=Homo sapiens, GI38158022, Length=553, Percent_Identity=36.7088607594937, Blast_Score=357, Evalue=5e-98,
Organism=Homo sapiens, GI299829255, Length=605, Percent_Identity=33.8842975206612, Blast_Score=351, Evalue=3e-96,
Organism=Homo sapiens, GI261878478, Length=649, Percent_Identity=32.8197226502311, Blast_Score=342, Evalue=1e-93,
Organism=Homo sapiens, GI20336290, Length=517, Percent_Identity=35.0096711798839, Blast_Score=261, Evalue=4e-69,
Organism=Homo sapiens, GI167830433, Length=566, Percent_Identity=31.6254416961131, Blast_Score=260, Evalue=5e-69,
Organism=Homo sapiens, GI20336294, Length=517, Percent_Identity=35.0096711798839, Blast_Score=260, Evalue=5e-69,
Organism=Homo sapiens, GI261878481, Length=599, Percent_Identity=29.5492487479132, Blast_Score=256, Evalue=1e-67,
Organism=Homo sapiens, GI166851804, Length=601, Percent_Identity=31.9467554076539, Blast_Score=253, Evalue=9e-67,
Organism=Homo sapiens, GI167830436, Length=563, Percent_Identity=31.6163410301954, Blast_Score=251, Evalue=2e-66,
Organism=Homo sapiens, GI100913206, Length=648, Percent_Identity=28.5493827160494, Blast_Score=230, Evalue=5e-60,
Organism=Homo sapiens, GI20336300, Length=649, Percent_Identity=27.4268104776579, Blast_Score=218, Evalue=3e-56,
Organism=Homo sapiens, GI163914394, Length=648, Percent_Identity=26.5432098765432, Blast_Score=195, Evalue=3e-49,
Organism=Homo sapiens, GI29029601, Length=422, Percent_Identity=30.8056872037915, Blast_Score=171, Evalue=5e-42,
Organism=Homo sapiens, GI67782362, Length=204, Percent_Identity=44.6078431372549, Blast_Score=169, Evalue=2e-41,
Organism=Homo sapiens, GI269847874, Length=189, Percent_Identity=41.2698412698413, Blast_Score=150, Evalue=1e-35,
Organism=Homo sapiens, GI39777586, Length=188, Percent_Identity=40.4255319148936, Blast_Score=148, Evalue=3e-35,
Organism=Escherichia coli, GI145693127, Length=1281, Percent_Identity=95.7845433255269, Blast_Score=2531, Evalue=0.0,
Organism=Escherichia coli, GI87081693, Length=441, Percent_Identity=35.6009070294785, Blast_Score=239, Evalue=9e-64,
Organism=Caenorhabditis elegans, GI17535281, Length=641, Percent_Identity=35.7254290171607, Blast_Score=407, Evalue=1e-113,
Organism=Caenorhabditis elegans, GI17554326, Length=651, Percent_Identity=36.7127496159754, Blast_Score=401, Evalue=1e-111,
Organism=Caenorhabditis elegans, GI25144243, Length=673, Percent_Identity=33.8781575037147, Blast_Score=383, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI32565154, Length=643, Percent_Identity=34.3701399688958, Blast_Score=377, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI17531507, Length=642, Percent_Identity=35.3582554517134, Blast_Score=376, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI17556386, Length=646, Percent_Identity=35.4489164086687, Blast_Score=367, Evalue=1e-101,
Organism=Caenorhabditis elegans, GI71990212, Length=671, Percent_Identity=32.3397913561848, Blast_Score=342, Evalue=5e-94,
Organism=Caenorhabditis elegans, GI71996313, Length=564, Percent_Identity=34.0425531914894, Blast_Score=290, Evalue=3e-78,
Organism=Caenorhabditis elegans, GI86562256, Length=588, Percent_Identity=27.3809523809524, Blast_Score=178, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17552054, Length=455, Percent_Identity=28.3516483516484, Blast_Score=156, Evalue=8e-38,
Organism=Caenorhabditis elegans, GI17507503, Length=367, Percent_Identity=28.8828337874659, Blast_Score=148, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6320850, Length=642, Percent_Identity=36.7601246105919, Blast_Score=422, Evalue=1e-118,
Organism=Saccharomyces cerevisiae, GI6321318, Length=646, Percent_Identity=36.0681114551084, Blast_Score=410, Evalue=1e-115,
Organism=Saccharomyces cerevisiae, GI6322939, Length=648, Percent_Identity=37.5, Blast_Score=357, Evalue=9e-99,
Organism=Saccharomyces cerevisiae, GI6324338, Length=664, Percent_Identity=33.7349397590361, Blast_Score=337, Evalue=5e-93,
Organism=Saccharomyces cerevisiae, GI6322772, Length=674, Percent_Identity=33.0860534124629, Blast_Score=331, Evalue=5e-91,
Organism=Saccharomyces cerevisiae, GI6323451, Length=594, Percent_Identity=28.7878787878788, Blast_Score=230, Evalue=9e-61,
Organism=Saccharomyces cerevisiae, GI6323776, Length=217, Percent_Identity=41.4746543778802, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI20129977, Length=648, Percent_Identity=37.1913580246914, Blast_Score=411, Evalue=1e-114,
Organism=Drosophila melanogaster, GI19921728, Length=643, Percent_Identity=34.9922239502333, Blast_Score=404, Evalue=1e-112,
Organism=Drosophila melanogaster, GI19921526, Length=694, Percent_Identity=35.5907780979827, Blast_Score=404, Evalue=1e-112,
Organism=Drosophila melanogaster, GI18859729, Length=637, Percent_Identity=36.1067503924647, Blast_Score=374, Evalue=1e-103,
Organism=Drosophila melanogaster, GI19920696, Length=645, Percent_Identity=35.5038759689922, Blast_Score=374, Evalue=1e-103,
Organism=Drosophila melanogaster, GI45550174, Length=661, Percent_Identity=35.4009077155825, Blast_Score=367, Evalue=1e-101,
Organism=Drosophila melanogaster, GI24643238, Length=561, Percent_Identity=33.6898395721925, Blast_Score=311, Evalue=2e-84,
Organism=Drosophila melanogaster, GI24585491, Length=615, Percent_Identity=30.2439024390244, Blast_Score=270, Evalue=6e-72,
Organism=Drosophila melanogaster, GI24642763, Length=536, Percent_Identity=30.9701492537313, Blast_Score=237, Evalue=5e-62,
Organism=Drosophila melanogaster, GI24585920, Length=522, Percent_Identity=31.0344827586207, Blast_Score=228, Evalue=3e-59,
Organism=Drosophila melanogaster, GI17136342, Length=525, Percent_Identity=31.047619047619, Blast_Score=226, Evalue=6e-59,
Organism=Drosophila melanogaster, GI24641942, Length=476, Percent_Identity=30.672268907563, Blast_Score=221, Evalue=4e-57,
Organism=Drosophila melanogaster, GI17136508, Length=599, Percent_Identity=29.2153589315526, Blast_Score=197, Evalue=3e-50,
Organism=Drosophila melanogaster, GI17136242, Length=505, Percent_Identity=28.7128712871287, Blast_Score=160, Evalue=5e-39,
Organism=Drosophila melanogaster, GI24641139, Length=304, Percent_Identity=31.5789473684211, Blast_Score=134, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR011709
- InterPro:   IPR007502
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR010222 [H]

Pfam domain/function: PF00270 DEAD; PF07717 DUF1605; PF04408 HA2; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 146543; Mature: 146543

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRDKQRFARRLHGVKKVKNPDAQQAIFQTMAKEIEQAAAQVALREAARPSITYPQNLPV
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVA
CHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH
NRIAEELQTEPGGCIGYKVRFSDHVSSNTMVKLMTDGILLAEIQQDRLLMQYDTLIIDEA
HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHEECH
HERSLNIDFLLGYLKELLPRRPDLKVIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
HHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEECCCEEEEEEE
YRPIVEEADDTERDQLQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLNLRHTE
EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHH
VLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK
HHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHH
VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ
HHHCCCCCHHHCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITADEQQTAYKLTPLGRQLSQLPVD
HHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHEEEECHHHHHHHHCCCC
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPVDKQQASDEKHRRFHDKESDFLAFV
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHCCCCCHHHHHHH
NLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
REIHVALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRL
HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
WGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEECEEEEEECCCCEECCCCHHH
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDTLFEFY
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCHHHHHHH
DQRISHDVISARHFDSWWKKISRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEE
RLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLRRELVIALIKSLPKPVRRNFV
EEEEEECCCCCCCCEEEEECCHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCHHHHHCCC
PAPNYAEAFLGRVTPLELPLLDALERELRRMTGVTVDREDWHWDQVPEHLKITFRVVNDK
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEEEEECCC
NKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQSGLHIWSFGELPESYEQKRGNYKVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCEEEE
AWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF
ECHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEE
NPYGKVLELIDDCIACGVDKLIDANGGPVWSEAGFTALHEKVRAELNDTVVDIAKQVERI
CCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
HHHHHHHHHHHCCCCCHHHHHCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHH
LEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPARREDDDVKEIRWMIEELRVSYFAQQ
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGTPYPISDKRILQAMDQITA
CCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLRDKQRFARRLHGVKKVKNPDAQQAIFQTMAKEIEQAAAQVALREAARPSITYPQNLPV
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVA
CHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH
NRIAEELQTEPGGCIGYKVRFSDHVSSNTMVKLMTDGILLAEIQQDRLLMQYDTLIIDEA
HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHEECH
HERSLNIDFLLGYLKELLPRRPDLKVIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
HHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEECCCEEEEEEE
YRPIVEEADDTERDQLQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLNLRHTE
EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHH
VLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK
HHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHH
VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ
HHHCCCCCHHHCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITADEQQTAYKLTPLGRQLSQLPVD
HHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHEEEECHHHHHHHHCCCC
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPVDKQQASDEKHRRFHDKESDFLAFV
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHCCCCCHHHHHHH
NLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
REIHVALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRL
HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
WGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEECEEEEEECCCCEECCCCHHH
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDTLFEFY
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCHHHHHHH
DQRISHDVISARHFDSWWKKISRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEE
RLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLRRELVIALIKSLPKPVRRNFV
EEEEEECCCCCCCCEEEEECCHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCHHHHHCCC
PAPNYAEAFLGRVTPLELPLLDALERELRRMTGVTVDREDWHWDQVPEHLKITFRVVNDK
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEEEEECCC
NKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQSGLHIWSFGELPESYEQKRGNYKVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCEEEE
AWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF
ECHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEE
NPYGKVLELIDDCIACGVDKLIDANGGPVWSEAGFTALHEKVRAELNDTVVDIAKQVERI
CCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
HHHHHHHHHHHCCCCCHHHHHCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHH
LEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPARREDDDVKEIRWMIEELRVSYFAQQ
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGTPYPISDKRILQAMDQITA
CCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7899078; 9097039; 9278503 [H]