Click here to switch to the map view.

The map label for this gene is fliY [H]

Identifier: 16764977

GI number: 16764977

Start: 1723891

End: 1724652

Strand: Direct

Name: fliY [H]

Synonym: STM1633

Alternate gene names: 16764977

Gene position: 1723891-1724652 (Clockwise)

Preceding gene: 16764975

Following gene: 16764978

Centisome position: 35.49

GC content: 39.63

Gene sequence:

>762_bases
ATGTTATCCAAAAAATTTGGCTTATCGATGATAGTGTTGGGAATAATGTCGTCTTCAGCGTTTGCTGATAGCATCGTTGA
AGGGAGAACACTCAATGTCGCAGTATCACCAGCCTCTCCCCCTATGTTATTTAAAAGTGCTGATGGCAAATTGCAGGGGA
TAGATCTGGAGCTTTTTTCGTCTTACTGTCAGTCACGGCATTGTAAGCTAAACATCACCGAATATGCCTGGGATGGAATG
CTTGGCGCAGTGGCGAGTGGTCAGGCAGATGTAGCATTTTCGGGAATTTCAATCACAGATAAACGTAAGAAAGTTATTGA
TTTCTCTGAACCTTATTACATCAACTCTTTTTATCTGGTCAGTATGGCCAATCATAAAATAACGCTCAATAACCTCAATG
AATTAAATAAATATTCTATTGGATACCCTCGAGGAATGGCTTACTCCGACCTTATCAAAAACGATCTGGAGCCCAAAGGA
TACTACTCGTTAAGTAAAGTAAAATTGTATCCAACCTATAATGAGACGATGGCTGATCTAAAAAATGGCAATCTTGATCT
GGCTTTTATAGAAGAGCCGGTTTATTTTACCTTCAAAAATAAGAAAAAGATGCCGATAGAAAGCCGTTATGTTTTCAAGA
ATGTTGATCAGCTTGGCATTGCCTTTAAGAAAGGCTCTCCCGTGCGCGATGATTTCAACTTATGGCTTAAAGAGCAAGGG
CCACAAAAAATATCTGGCATTGTCGATAGCTGGATGAAATAG

Upstream 100 bases:

>100_bases
GGAATACATAACGTTAAGTACTTTACGCCTGCAAATGTCAGGCTCACGCCCTAATGCTTAATTTATAATACGCATTACCT
TACTACAGGAAATAGATAGC

Downstream 100 bases:

>100_bases
TAAGCTATGTCATCAGGTAATATGCTGGCTATCTTTTATTTCCTATTGGAAGGGATTGGTAATACGCTGCTTGTAACATT
TACCTGTTTTCTCTCAGCGT

Product: periplasmic binding protein

Products: NA

Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MLSKKFGLSMIVLGIMSSSAFADSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLELFSSYCQSRHCKLNITEYAWDGM
LGAVASGQADVAFSGISITDKRKKVIDFSEPYYINSFYLVSMANHKITLNNLNELNKYSIGYPRGMAYSDLIKNDLEPKG
YYSLSKVKLYPTYNETMADLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFKNVDQLGIAFKKGSPVRDDFNLWLKEQG
PQKISGIVDSWMK

Sequences:

>Translated_253_residues
MLSKKFGLSMIVLGIMSSSAFADSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLELFSSYCQSRHCKLNITEYAWDGM
LGAVASGQADVAFSGISITDKRKKVIDFSEPYYINSFYLVSMANHKITLNNLNELNKYSIGYPRGMAYSDLIKNDLEPKG
YYSLSKVKLYPTYNETMADLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFKNVDQLGIAFKKGSPVRDDFNLWLKEQG
PQKISGIVDSWMK
>Mature_253_residues
MLSKKFGLSMIVLGIMSSSAFADSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLELFSSYCQSRHCKLNITEYAWDGM
LGAVASGQADVAFSGISITDKRKKVIDFSEPYYINSFYLVSMANHKITLNNLNELNKYSIGYPRGMAYSDLIKNDLEPKG
YYSLSKVKLYPTYNETMADLKNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFKNVDQLGIAFKKGSPVRDDFNLWLKEQG
PQKISGIVDSWMK

Specific function: Part of a binding-protein-dependent transport system for cystine [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=224, Percent_Identity=23.6607142857143, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787085, Length=185, Percent_Identity=27.027027027027, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787031, Length=240, Percent_Identity=27.0833333333333, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787088, Length=212, Percent_Identity=23.1132075471698, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 28439; Mature: 28439

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKKFGLSMIVLGIMSSSAFADSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLELFS
CCCCHHCHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCEEECCHHHHH
SYCQSRHCKLNITEYAWDGMLGAVASGQADVAFSGISITDKRKKVIDFSEPYYINSFYLV
HHHHCCCCEEEEHHHHHCCHHHHHCCCCCCEEEECCEECCCCCEEECCCCCEEECEEEEE
SMANHKITLNNLNELNKYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPTYNETMADL
EECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHHH
KNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFKNVDQLGIAFKKGSPVRDDFNLWLKEQG
CCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHCHHHHCEEEECCCCCCCCCEEEEECCC
PQKISGIVDSWMK
CHHHHHHHHHHCC
>Mature Secondary Structure
MLSKKFGLSMIVLGIMSSSAFADSIVEGRTLNVAVSPASPPMLFKSADGKLQGIDLELFS
CCCCHHCHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCEEECCHHHHH
SYCQSRHCKLNITEYAWDGMLGAVASGQADVAFSGISITDKRKKVIDFSEPYYINSFYLV
HHHHCCCCEEEEHHHHHCCHHHHHCCCCCCEEEECCEECCCCCEEECCCCCEEECEEEEE
SMANHKITLNNLNELNKYSIGYPRGMAYSDLIKNDLEPKGYYSLSKVKLYPTYNETMADL
EECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHHH
KNGNLDLAFIEEPVYFTFKNKKKMPIESRYVFKNVDQLGIAFKKGSPVRDDFNLWLKEQG
CCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHCHHHHCEEEECCCCCCCCCEEEEECCC
PQKISGIVDSWMK
CHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]