Click here to switch to the map view.

The map label for this gene is 16764900

Identifier: 16764900

GI number: 16764900

Start: 1633281

End: 1634732

Strand: Direct

Name: 16764900

Synonym: STM1556

Alternate gene names: NA

Gene position: 1633281-1634732 (Clockwise)

Preceding gene: 16764899

Following gene: 16764901

Centisome position: 33.62

GC content: 51.31

Gene sequence:

>1452_bases
ATGAGTGCATCACAAAACAAGAAGAAAACGCTGTCATTGGGTTTAGCGCTAATCCCAGTCATCTCCATGTTGTTATTGTT
GATTATCGGTTACGGCATTATGGGGCTACGTATCGAACCGCTCCTTCTGTGCTCTGCGGCGGTAGCGGCAGGCATTGCAT
GGTGGCAAGGATACTGTTGGGAAGACATCATCAACTCAGTGGTGGATAAGCTGGCTAAAGCAATGCCGGTTATCATGATC
CTGATCTGCGTGGGCGGTTTGATTGGCTCCTGGATGTTTAGTGGCACCATTCCCTACATGGTGTACTGGGGGCTAAAACT
CATAAGCCCGGAATATATTTTGATTGCAGCCTTCTTTTTAACCAGCGTGGTCTCCGTCTGTACCGGTACATCGTGGGGAT
CCGCCGGGACGGTTGGCGTTGCGTTAATGGGGGTTGCCGCCGGGCTGGACGTGTCTCTTGCAGCAGCAGCTGGCGCCGTT
GTTTCTGGCGCTTATTTCGGCGACAAAATCTCACCGTTGTCCGACTCGACTAACTTTGCCGCGATTGTCGCAGACACTAC
TCTGTTTGAGCATATTCAGCATTTACTTTGGACGACCCTGCCAAGTTTCCTGCTTGCCGCCGTGGTTTATCTTATCGCCG
GACACAGTAATATGCTGGGCGAGGTGGCTACGCCGCAGCGCGTTACGGACATCATCCACTCGCTGGAGTCGCTATACCAT
TTTAATATTGTTCTTATTTTGCCGCCGGTGATCGTACTGTGGGGCGCAATTCGCAAAAAGCCTGTCATCCCATTAATGTT
AAGCGCCTGCGTACTTGCCTTGTTCCTCGGCGTCATCATGCAGGGACTGAGCATCAAACAGGGACTGGACGCTTTCATTG
ATGGATTTGATATCGCCATGTTCCCACAAGGCGCAGAAGGTGTCGTGGCCGATGTTCCGCGCCTGCTAAACCGGGGCGGA
ATGTTCTCGATGATGGGAACAATACTGTTAGTTTTCTGCGCTTTTTCATTTGCCGGAGCGCTAACGTTAACCGGCGCGTT
AACAATCATCATTAACCGACTGCTGACCATTATTCATAGCGTTGGTCAACTCATTGCCGCCACTATCGGCACCACAATTT
TGGTCACAGGAGCGACCAGCGACGGTAAACTGGCATTGTTAGTTCCCGCCGAACTGTTTAAAGATGCCTATCGTCGTATG
GGGCTGGATACTAAAAACCTTTCACGGACGATAGAAGATGCCGGTACCGTTATCGAACCTCTCCTGCCGTGGACCTCGGC
TGGCGTCTACATGGCAACCACGCTGGGCGTTAGCACGCTTGATCTTCTGCCCTGGGCTATCCAATGCTATGCGGCAATCT
TCTTCGCATTAATTTATGGTTTTAGCGGAATTGGTATTGCCAGAACTGCCTCCGCCTCAGAAAAGTCGCCGCAATCGTCA
GTGACGGAATAA

Upstream 100 bases:

>100_bases
CCTTCTCATGTAATCGGTTACATGGACGAAAGTAATGGATCACAGTAGTGGGAAGCGTATCCCCCTACCCTTGAGCTACC
TTACTGACCGGAGCTCCATT

Downstream 100 bases:

>100_bases
TAAGGAAACAAGATGGATTTTAACCAGATTATCAATCGCAACAATACTGGTTCGGTAAAGTGGGATTTTATTGAGCGTCA
CTTTGGCGATGGCGCAGGGA

Product: Na+/H+ antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MSASQNKKKTLSLGLALIPVISMLLLLIIGYGIMGLRIEPLLLCSAAVAAGIAWWQGYCWEDIINSVVDKLAKAMPVIMI
LICVGGLIGSWMFSGTIPYMVYWGLKLISPEYILIAAFFLTSVVSVCTGTSWGSAGTVGVALMGVAAGLDVSLAAAAGAV
VSGAYFGDKISPLSDSTNFAAIVADTTLFEHIQHLLWTTLPSFLLAAVVYLIAGHSNMLGEVATPQRVTDIIHSLESLYH
FNIVLILPPVIVLWGAIRKKPVIPLMLSACVLALFLGVIMQGLSIKQGLDAFIDGFDIAMFPQGAEGVVADVPRLLNRGG
MFSMMGTILLVFCAFSFAGALTLTGALTIIINRLLTIIHSVGQLIAATIGTTILVTGATSDGKLALLVPAELFKDAYRRM
GLDTKNLSRTIEDAGTVIEPLLPWTSAGVYMATTLGVSTLDLLPWAIQCYAAIFFALIYGFSGIGIARTASASEKSPQSS
VTE

Sequences:

>Translated_483_residues
MSASQNKKKTLSLGLALIPVISMLLLLIIGYGIMGLRIEPLLLCSAAVAAGIAWWQGYCWEDIINSVVDKLAKAMPVIMI
LICVGGLIGSWMFSGTIPYMVYWGLKLISPEYILIAAFFLTSVVSVCTGTSWGSAGTVGVALMGVAAGLDVSLAAAAGAV
VSGAYFGDKISPLSDSTNFAAIVADTTLFEHIQHLLWTTLPSFLLAAVVYLIAGHSNMLGEVATPQRVTDIIHSLESLYH
FNIVLILPPVIVLWGAIRKKPVIPLMLSACVLALFLGVIMQGLSIKQGLDAFIDGFDIAMFPQGAEGVVADVPRLLNRGG
MFSMMGTILLVFCAFSFAGALTLTGALTIIINRLLTIIHSVGQLIAATIGTTILVTGATSDGKLALLVPAELFKDAYRRM
GLDTKNLSRTIEDAGTVIEPLLPWTSAGVYMATTLGVSTLDLLPWAIQCYAAIFFALIYGFSGIGIARTASASEKSPQSS
VTE
>Mature_482_residues
SASQNKKKTLSLGLALIPVISMLLLLIIGYGIMGLRIEPLLLCSAAVAAGIAWWQGYCWEDIINSVVDKLAKAMPVIMIL
ICVGGLIGSWMFSGTIPYMVYWGLKLISPEYILIAAFFLTSVVSVCTGTSWGSAGTVGVALMGVAAGLDVSLAAAAGAVV
SGAYFGDKISPLSDSTNFAAIVADTTLFEHIQHLLWTTLPSFLLAAVVYLIAGHSNMLGEVATPQRVTDIIHSLESLYHF
NIVLILPPVIVLWGAIRKKPVIPLMLSACVLALFLGVIMQGLSIKQGLDAFIDGFDIAMFPQGAEGVVADVPRLLNRGGM
FSMMGTILLVFCAFSFAGALTLTGALTIIINRLLTIIHSVGQLIAATIGTTILVTGATSDGKLALLVPAELFKDAYRRMG
LDTKNLSRTIEDAGTVIEPLLPWTSAGVYMATTLGVSTLDLLPWAIQCYAAIFFALIYGFSGIGIARTASASEKSPQSSV
TE

Specific function: Unknown

COG id: COG1757

COG function: function code C; Na+/H+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nhaC Na(+)/H(+) antiporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004770
- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 51058; Mature: 50927

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure 
SASQNKKKTLSLGLALIPVISMLLLLIIGYGIMGLRIEPLLLCSAAVAAGIAWWQGYCW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHCCCH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CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]