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The map label for this gene is pqaA

Identifier: 16764889

GI number: 16764889

Start: 1619783

End: 1621339

Strand: Reverse

Name: pqaA

Synonym: STM1544

Alternate gene names: NA

Gene position: 1621339-1619783 (Counterclockwise)

Preceding gene: 16764890

Following gene: 16764888

Centisome position: 33.38

GC content: 41.81

Gene sequence:

>1557_bases
ATGTTTAAGAGGTATTTATGGAAATTATGCTGGCTGGCATTTGCCCTTGTAAAGCGCGGGGAAAGCATGAAAAAAATATA
TCTCGTTGTTATCGTACTGTTTTTCATTTCTACAAAAGTTTATACACTACTTCATAACAACATCTTCTTTTGTCGAAACA
GCCCGGAGTGTGATTTGTCTCATGTTCTCCCCGACTACCGGGAGCAGATTTCAGGCACACCGCTAAAATATACCTTGATT
AATACAGCTCCATTAGCACAGGTGGTAGTCAGACACTATGAATTATTATCGCAACACTGGTCGCCAGATGACATGGTAAC
CCCTGCGCAATGGCGACATAACGTTGATATTTATATCCCTGAAACGGCAAAAGAGCACCATGCTTTGGTGGTTGTAAACA
ACGGAATTAATTATGATAAAGGCGTACAAATCACTGGTAAACCCGGTGATTTCCCCCAGGAAACACTGGCAAGCATCTCC
CGTGATACGAATACCATCGTAATATCAGTGAGTGATATACCTAACCAATATTTAACCTTTCAGGATGATAAAAAACCACT
GAAAGAGGACGAAAGCGTTTCCCGAAGCTGGGCATTATTTATGGAAGCGCCGGAGCAACGTAAGTTAATGCCTTTAAATA
TTCCTATGGTCACTGCCATATCGCAAGCGATGAGATTAGCAAAAAAGGAGTTAACGCAATGGAATATAAATTCCTTTATC
ATTACAGGTATTTCAAAGCGTGGGTGGACCACCTGGTTGTCAGCTATTGCCGATCCTGATGTTGAAGCAATTGTTCCCTT
CGCCATTGATCTACTTGATATTGATGCTTCACTTGAGCATATTTATCAATCATACGGTGGAAATTGGCCCATTACATTCT
ACCCCTACTACCAGCAAGGCATAGATGAGAAAATAAAATCCCCCGCATTTACCCAGCTAAGGCAAATAATAGATCCGTTA
AGATATCTCAACACTATTTACCAACCCCGCCTTGCAATACCTAAATATATTATTAATGCAAGTGGCGATGATTTTTTCGT
ACCAGACAACACTCGCTTTTATTATAGCAAACTTCCTGGCGTAAAATCATTACGTATAGTGCCTAATATGAACCACTACT
CAATTAACCAGTTCGCTGAAGGAAGCCTCGTTCCATTTATTAACCGGTTTCAAAGTAAAAAAACATTACCACAGTTGATC
GACCTTATTCACCACCACCTTCTTACGGTCTATTTCTCAGAAGCGCCGGTAAAAGTCGTTCGCTGGACAGCCAACAATCC
AAATGCGCGTGATTTTCGTTATGCCTGTGGTATCCGCTATCAGCCGCTTACAATAGATAGTCCCGTCAACAATAAGATCA
GTATTACGCTAAATGAACCGAAGACAGGTTGGGAAGCTACCTATATCGAAGCAACTTTTAATGATGGCTATGTCGCCACG
AGTCAGGTTTATATTACGCCCGATGAAAAATACCCACAGACAGCGCCACCTTCCGTTAACGCCGCATGTCAAACTTTACC
GGGGCGTGGATTAGGGGAAAACGATAGCTCCGATTGA

Upstream 100 bases:

>100_bases
AGTGCTAATAGTGAAACCAGAAACAGAATAATGTGACAACGTCACAAACATTATTGTTCCCTTCTTCCGTTATTTATCAA
AAGTATTGTACTTATATTGA

Downstream 100 bases:

>100_bases
ATTTTCAATTAATCAACTGATTTTAAAGAATTTAATCCATCACACTTGCGATGGATAAAAATCCCCTGTGATAAATTTTT
GTTATATTGATCACGTTCTA

Product: PhoPQ-regulated protein

Products: NA

Alternate protein names: PhoPQ-Activated Pathogenicity-Related Protein PqaA Type; PhoPQ-Regulated Protein; Phopq-Activated Pathogenicity-Related Protein Pqaa Type; Transmembrane Protein; PhoPQ-Activated Pathogenicity-Related Protein; PhoPQ-Activated Pathogenicity-Like Protein PqaA Type; Secreted Protein; PhoPQ-Activated Pathogenicity-Like Protein

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MFKRYLWKLCWLAFALVKRGESMKKIYLVVIVLFFISTKVYTLLHNNIFFCRNSPECDLSHVLPDYREQISGTPLKYTLI
NTAPLAQVVVRHYELLSQHWSPDDMVTPAQWRHNVDIYIPETAKEHHALVVVNNGINYDKGVQITGKPGDFPQETLASIS
RDTNTIVISVSDIPNQYLTFQDDKKPLKEDESVSRSWALFMEAPEQRKLMPLNIPMVTAISQAMRLAKKELTQWNINSFI
ITGISKRGWTTWLSAIADPDVEAIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQQGIDEKIKSPAFTQLRQIIDPL
RYLNTIYQPRLAIPKYIINASGDDFFVPDNTRFYYSKLPGVKSLRIVPNMNHYSINQFAEGSLVPFINRFQSKKTLPQLI
DLIHHHLLTVYFSEAPVKVVRWTANNPNARDFRYACGIRYQPLTIDSPVNNKISITLNEPKTGWEATYIEATFNDGYVAT
SQVYITPDEKYPQTAPPSVNAACQTLPGRGLGENDSSD

Sequences:

>Translated_518_residues
MFKRYLWKLCWLAFALVKRGESMKKIYLVVIVLFFISTKVYTLLHNNIFFCRNSPECDLSHVLPDYREQISGTPLKYTLI
NTAPLAQVVVRHYELLSQHWSPDDMVTPAQWRHNVDIYIPETAKEHHALVVVNNGINYDKGVQITGKPGDFPQETLASIS
RDTNTIVISVSDIPNQYLTFQDDKKPLKEDESVSRSWALFMEAPEQRKLMPLNIPMVTAISQAMRLAKKELTQWNINSFI
ITGISKRGWTTWLSAIADPDVEAIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQQGIDEKIKSPAFTQLRQIIDPL
RYLNTIYQPRLAIPKYIINASGDDFFVPDNTRFYYSKLPGVKSLRIVPNMNHYSINQFAEGSLVPFINRFQSKKTLPQLI
DLIHHHLLTVYFSEAPVKVVRWTANNPNARDFRYACGIRYQPLTIDSPVNNKISITLNEPKTGWEATYIEATFNDGYVAT
SQVYITPDEKYPQTAPPSVNAACQTLPGRGLGENDSSD
>Mature_518_residues
MFKRYLWKLCWLAFALVKRGESMKKIYLVVIVLFFISTKVYTLLHNNIFFCRNSPECDLSHVLPDYREQISGTPLKYTLI
NTAPLAQVVVRHYELLSQHWSPDDMVTPAQWRHNVDIYIPETAKEHHALVVVNNGINYDKGVQITGKPGDFPQETLASIS
RDTNTIVISVSDIPNQYLTFQDDKKPLKEDESVSRSWALFMEAPEQRKLMPLNIPMVTAISQAMRLAKKELTQWNINSFI
ITGISKRGWTTWLSAIADPDVEAIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQQGIDEKIKSPAFTQLRQIIDPL
RYLNTIYQPRLAIPKYIINASGDDFFVPDNTRFYYSKLPGVKSLRIVPNMNHYSINQFAEGSLVPFINRFQSKKTLPQLI
DLIHHHLLTVYFSEAPVKVVRWTANNPNARDFRYACGIRYQPLTIDSPVNNKISITLNEPKTGWEATYIEATFNDGYVAT
SQVYITPDEKYPQTAPPSVNAACQTLPGRGLGENDSSD

Specific function: Unknown

COG id: COG4287

COG function: function code R; PhoPQ-activated pathogenicity-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59271; Mature: 59271

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKRYLWKLCWLAFALVKRGESMKKIYLVVIVLFFISTKVYTLLHNNIFFCRNSPECDLS
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHH
HVLPDYREQISGTPLKYTLINTAPLAQVVVRHYELLSQHWSPDDMVTPAQWRHNVDIYIP
HCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEC
ETAKEHHALVVVNNGINYDKGVQITGKPGDFPQETLASISRDTNTIVISVSDIPNQYLTF
CCCCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCEEE
QDDKKPLKEDESVSRSWALFMEAPEQRKLMPLNIPMVTAISQAMRLAKKELTQWNINSFI
CCCCCCCCCCHHHHHHEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEE
ITGISKRGWTTWLSAIADPDVEAIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQQG
EEECCCCCHHHHHHHHCCCCHHEEHHHHEEEEECCHHHHHHHHHHCCCCCEEEECHHHHC
IDEKIKSPAFTQLRQIIDPLRYLNTIYQPRLAIPKYIINASGDDFFVPDNTRFYYSKLPG
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCEEECCCCCEEEEECCCC
VKSLRIVPNMNHYSINQFAEGSLVPFINRFQSKKTLPQLIDLIHHHLLTVYFSEAPVKVV
CCEEEEECCCCCCCCCHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCEEEE
RWTANNPNARDFRYACGIRYQPLTIDSPVNNKISITLNEPKTGWEATYIEATFNDGYVAT
EEECCCCCCCCEEEECCCEECCEEECCCCCCEEEEEECCCCCCCEEEEEEEECCCCEEEE
SQVYITPDEKYPQTAPPSVNAACQTLPGRGLGENDSSD
EEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MFKRYLWKLCWLAFALVKRGESMKKIYLVVIVLFFISTKVYTLLHNNIFFCRNSPECDLS
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHH
HVLPDYREQISGTPLKYTLINTAPLAQVVVRHYELLSQHWSPDDMVTPAQWRHNVDIYIP
HCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEC
ETAKEHHALVVVNNGINYDKGVQITGKPGDFPQETLASISRDTNTIVISVSDIPNQYLTF
CCCCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCEEE
QDDKKPLKEDESVSRSWALFMEAPEQRKLMPLNIPMVTAISQAMRLAKKELTQWNINSFI
CCCCCCCCCCHHHHHHEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEE
ITGISKRGWTTWLSAIADPDVEAIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQQG
EEECCCCCHHHHHHHHCCCCHHEEHHHHEEEEECCHHHHHHHHHHCCCCCEEEECHHHHC
IDEKIKSPAFTQLRQIIDPLRYLNTIYQPRLAIPKYIINASGDDFFVPDNTRFYYSKLPG
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCEEECCCCCEEEEECCCC
VKSLRIVPNMNHYSINQFAEGSLVPFINRFQSKKTLPQLIDLIHHHLLTVYFSEAPVKVV
CCEEEEECCCCCCCCCHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCEEEE
RWTANNPNARDFRYACGIRYQPLTIDSPVNNKISITLNEPKTGWEATYIEATFNDGYVAT
EEECCCCCCCCEEEECCCEECCEEECCCCCCEEEEEECCCCCCCEEEEEEEECCCCEEEE
SQVYITPDEKYPQTAPPSVNAACQTLPGRGLGENDSSD
EEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA