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The map label for this gene is ynfM [H]

Identifier: 16764831

GI number: 16764831

Start: 1562701

End: 1563954

Strand: Reverse

Name: ynfM [H]

Synonym: STM1486

Alternate gene names: 16764831

Gene position: 1563954-1562701 (Counterclockwise)

Preceding gene: 161353601

Following gene: 161353602

Centisome position: 32.2

GC content: 55.18

Gene sequence:

>1254_bases
GTGAGTCGTACAACTATTCTCGATGACGCCACGGCGAGCGATATCGATGAACAACGCCATTCTCAGCCGGTTCAATTTAT
TAAACGCGGTACAGCGCCTTTCATGCGCGTCACGCTGGCCCTTTTTTCCGCGGGCCTGGCGACTTTTGCGCTCCTTTATT
GCGTTCAGCCTATACTACCGGTACTTTCCCAGGAGTTTGGCGTCTCCCCCGCCAGCAGCAGCGTTTCACTTTCTATTTCT
ACCGCCATGCTGGCTATCGGCTTACTTTTTACCGGCCCGCTTTCTGATGCGATAGGCCGTAAACCGGTGATGGTCACCGC
CTTGTTATTAGCCTCCTGCTGCACATTGTTATCAACCATGATGACCAGCTGGCATGGTATTCTGATTATGCGCGCGCTGA
TCGGTCTGTCGTTAAGCGGCGTCGCCGCGGTGGGAATGACCTACCTGAGCGAAGAAATCCATCCCAGCTTTGTCGCTTTC
TCTATGGGGCTCTACATTAGCGGTAATTCCATCGGCGGAATGAGCGGACGTTTATTAAGCGGCGTCATGACCGACTTTTT
TAACTGGCGCATCGCGCTGGCGGCCATCGGATGCTTTGCGCTGGCGTCCGCGCTGATGTTCTGGAAGATTTTACCCGCCT
CGCAACATTTCCGTCCCACGTCGCTACGGCCTAAAACGCTATTTATTAATTTTCGTCTCCACTGGCGCGATCGAGGGTTA
CCTCTGCTGTTTGCGGAAGGCTTTTTACTGATGGGCGCGTTCGTCACCCTGTTTAACTACATTGGCTATCGCCTGATGCT
CTCCCCCTGGGAATTAAGCCAGGCCGTGGTCGGACTGTTATCCGTAGCCTATCTCACCGGCACATGGAGCTCGCCGAAAG
CTGGCGCAATGACCTCACGCTATGGCCGGGGGCCGGTGATGCTGTTCTCTACCGCAGTAATGCTGGGTGGGCTTTTACTG
ACGCTTTTTACCTCGCTTTGGCTGATTTTTGCCGGGATGCTGCTTTTTTCCGCCGGCTTTTTCGCCGCGCACTCCGTGGC
CAGTAGTTGGATTGGCCCGCGTGCGCGCCGGGCGAAGGGACAGGCCTCGTCACTTTATCTTTTCAGCTATTATCTGGGGT
CCAGTATTGCCGGGACGCTAGGCGGCGTATTCTGGCATAGTTACGGCTGGAACGGCGTAGGTGGTTTTATCGCGCTAATG
CTGGTGCTGGCCATCCTGGTCGGGACGCGGTTACATCATCGTCTTCACGCCTGA

Upstream 100 bases:

>100_bases
AGACAATTAATATATTAGACAGAATATTTTGCTTTTTCTATGCTTTACATGTCGGTTATACCCGTCTCCTGTTGACGGAG
ATGTAAAGCAAGGATTTAAC

Downstream 100 bases:

>100_bases
AAAGAAATAATCCGGCGATAGCAACGTGCGCTATCGCCGGGCTGGTTTCACGCCACGATTCACTGTTCACCACAGACCTG
TCAAGCTTGATACGCCCATA

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MSRTTILDDATASDIDEQRHSQPVQFIKRGTAPFMRVTLALFSAGLATFALLYCVQPILPVLSQEFGVSPASSSVSLSIS
TAMLAIGLLFTGPLSDAIGRKPVMVTALLLASCCTLLSTMMTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAF
SMGLYISGNSIGGMSGRLLSGVMTDFFNWRIALAAIGCFALASALMFWKILPASQHFRPTSLRPKTLFINFRLHWRDRGL
PLLFAEGFLLMGAFVTLFNYIGYRLMLSPWELSQAVVGLLSVAYLTGTWSSPKAGAMTSRYGRGPVMLFSTAVMLGGLLL
TLFTSLWLIFAGMLLFSAGFFAAHSVASSWIGPRARRAKGQASSLYLFSYYLGSSIAGTLGGVFWHSYGWNGVGGFIALM
LVLAILVGTRLHHRLHA

Sequences:

>Translated_417_residues
MSRTTILDDATASDIDEQRHSQPVQFIKRGTAPFMRVTLALFSAGLATFALLYCVQPILPVLSQEFGVSPASSSVSLSIS
TAMLAIGLLFTGPLSDAIGRKPVMVTALLLASCCTLLSTMMTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAF
SMGLYISGNSIGGMSGRLLSGVMTDFFNWRIALAAIGCFALASALMFWKILPASQHFRPTSLRPKTLFINFRLHWRDRGL
PLLFAEGFLLMGAFVTLFNYIGYRLMLSPWELSQAVVGLLSVAYLTGTWSSPKAGAMTSRYGRGPVMLFSTAVMLGGLLL
TLFTSLWLIFAGMLLFSAGFFAAHSVASSWIGPRARRAKGQASSLYLFSYYLGSSIAGTLGGVFWHSYGWNGVGGFIALM
LVLAILVGTRLHHRLHA
>Mature_416_residues
SRTTILDDATASDIDEQRHSQPVQFIKRGTAPFMRVTLALFSAGLATFALLYCVQPILPVLSQEFGVSPASSSVSLSIST
AMLAIGLLFTGPLSDAIGRKPVMVTALLLASCCTLLSTMMTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAFS
MGLYISGNSIGGMSGRLLSGVMTDFFNWRIALAAIGCFALASALMFWKILPASQHFRPTSLRPKTLFINFRLHWRDRGLP
LLFAEGFLLMGAFVTLFNYIGYRLMLSPWELSQAVVGLLSVAYLTGTWSSPKAGAMTSRYGRGPVMLFSTAVMLGGLLLT
LFTSLWLIFAGMLLFSAGFFAAHSVASSWIGPRARRAKGQASSLYLFSYYLGSSIAGTLGGVFWHSYGWNGVGGFIALML
VLAILVGTRLHHRLHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=417, Percent_Identity=91.3669064748201, Blast_Score=758, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45019; Mature: 44888

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTTILDDATASDIDEQRHSQPVQFIKRGTAPFMRVTLALFSAGLATFALLYCVQPILP
CCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSQEFGVSPASSSVSLSISTAMLAIGLLFTGPLSDAIGRKPVMVTALLLASCCTLLSTM
HHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
MTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAFSMGLYISGNSIGGMSGRLLS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHCEEEECCCCCCCHHHHHH
GVMTDFFNWRIALAAIGCFALASALMFWKILPASQHFRPTSLRPKTLFINFRLHWRDRGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEECCCC
PLLFAEGFLLMGAFVTLFNYIGYRLMLSPWELSQAVVGLLSVAYLTGTWSSPKAGAMTSR
CCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHC
YGRGPVMLFSTAVMLGGLLLTLFTSLWLIFAGMLLFSAGFFAAHSVASSWIGPRARRAKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
QASSLYLFSYYLGSSIAGTLGGVFWHSYGWNGVGGFIALMLVLAILVGTRLHHRLHA
CCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRTTILDDATASDIDEQRHSQPVQFIKRGTAPFMRVTLALFSAGLATFALLYCVQPILP
CCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSQEFGVSPASSSVSLSISTAMLAIGLLFTGPLSDAIGRKPVMVTALLLASCCTLLSTM
HHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
MTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAFSMGLYISGNSIGGMSGRLLS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHCEEEECCCCCCCHHHHHH
GVMTDFFNWRIALAAIGCFALASALMFWKILPASQHFRPTSLRPKTLFINFRLHWRDRGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEECCCC
PLLFAEGFLLMGAFVTLFNYIGYRLMLSPWELSQAVVGLLSVAYLTGTWSSPKAGAMTSR
CCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHC
YGRGPVMLFSTAVMLGGLLLTLFTSLWLIFAGMLLFSAGFFAAHSVASSWIGPRARRAKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
QASSLYLFSYYLGSSIAGTLGGVFWHSYGWNGVGGFIALMLVLAILVGTRLHHRLHA
CCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]