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The map label for this gene is ssaO

Identifier: 16764766

GI number: 16764766

Start: 1496995

End: 1497372

Strand: Direct

Name: ssaO

Synonym: STM1416

Alternate gene names: 16764766

Gene position: 1496995-1497372 (Clockwise)

Preceding gene: 16764765

Following gene: 16764767

Centisome position: 30.82

GC content: 43.65

Gene sequence:

>378_bases
ATGGAAACTTTGCTGGAGATAATCGCGCGGCGTGAAAAGCAATTACGCGGCAAGCTTACCGTACTTGATCAGCAGCAACA
GGCGATTATTACGGAACAGCAGATTTGCCAGACGCGCGCTTTAGCAGTGTCTACCAGACTGAAAGAATTAATGGGCTGGC
AAGGTACGTTATCTTGTCATTTATTGTTGGATAAGAAACAACAAATGGCCGGGTTATTCACTCAGGCGCAGAGCTTTTTG
ACGCAACGGCAGCAGTTAGAGAATCAGTATCAGCAGCTTGTCTCCCGGCGAAGCGAATTACAGAAGAATTTTAATGCGCT
TATGAAAAAGAAAGAAAAAATTACTATGGTATTAAGCGATGCGTATTACCAAAGTTGA

Upstream 100 bases:

>100_bases
CCTATCCGGATATTTGCACATTTTTGCGACAAAGTAAGGATGAAGTATGCGGACCCGAGCTACTTATAGAAAAATTACAC
CAAATACTCACCGAGTGATC

Downstream 100 bases:

>100_bases
GGGAAGTCTTGGGTTGCCATGCCAGTCTTATCAGGATGATAACGAGGCGGAGGCGGAACGTATGGACTTTGAACAACTCA
TGCACCAGGCATTACCCATT

Product: type III secretion system apparatus protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
METLLEIIARREKQLRGKLTVLDQQQQAIITEQQICQTRALAVSTRLKELMGWQGTLSCHLLLDKKQQMAGLFTQAQSFL
TQRQQLENQYQQLVSRRSELQKNFNALMKKKEKITMVLSDAYYQS

Sequences:

>Translated_125_residues
METLLEIIARREKQLRGKLTVLDQQQQAIITEQQICQTRALAVSTRLKELMGWQGTLSCHLLLDKKQQMAGLFTQAQSFL
TQRQQLENQYQQLVSRRSELQKNFNALMKKKEKITMVLSDAYYQS
>Mature_125_residues
METLLEIIARREKQLRGKLTVLDQQQQAIITEQQICQTRALAVSTRLKELMGWQGTLSCHLLLDKKQQMAGLFTQAQSFL
TQRQQLENQYQQLVSRRSELQKNFNALMKKKEKITMVLSDAYYQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSAO_SALTY (P74858)

Other databases:

- EMBL:   Y09357
- EMBL:   AE006468
- RefSeq:   NP_460381.1
- GeneID:   1252934
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM1416
- HOGENOM:   HBG673233
- OMA:   NTHRVIM
- ProtClustDB:   PRK15352
- BioCyc:   STYP99287:STM1416-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14619; Mature: 14619

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLLEIIARREKQLRGKLTVLDQQQQAIITEQQICQTRALAVSTRLKELMGWQGTLSCH
CHHHHHHHHHHHHHHHCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LLLDKKQQMAGLFTQAQSFLTQRQQLENQYQQLVSRRSELQKNFNALMKKKEKITMVLSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYYQS
HHHCC
>Mature Secondary Structure
METLLEIIARREKQLRGKLTVLDQQQQAIITEQQICQTRALAVSTRLKELMGWQGTLSCH
CHHHHHHHHHHHHHHHCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LLLDKKQQMAGLFTQAQSFLTQRQQLENQYQQLVSRRSELQKNFNALMKKKEKITMVLSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYYQS
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609