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The map label for this gene is ssaL

Identifier: 16764762

GI number: 16764762

Start: 1492229

End: 1493245

Strand: Direct

Name: ssaL

Synonym: STM1412

Alternate gene names: 16764762

Gene position: 1492229-1493245 (Clockwise)

Preceding gene: 16764761

Following gene: 16764763

Centisome position: 30.72

GC content: 45.62

Gene sequence:

>1017_bases
ATGGTGAAGATAAAAGAGGTAGCGATGAATATTAAAATTAATGAGATAAAAATGACGCCCCCTACAGCATTTACCCCTGG
CCAGGTTATAGAGGAACAAGAGGTTATTTCGCCTTCAATGTTAGCTCTCCAGGAGTTACAGGAAACGACGGGGGCAGCGC
TCTATGAGACGATGGAAGAAATAGGAATGGCGCTGAGTGGTAAACTGCGCGAAAATTATAAATTCACTGATGCTGAGAAA
CTGGAGCGCAGACAGCAGGCTTTGCTGCGTTTGATAAAACAAATACAGGAGGATAATGGGGCAACGTTGCGTCCGCTTAC
CGAAGAGAATAGTGATCCTGATTTACAGAATGCGTATCAAATTATCGCTCTTGCAATGGCGCTTACTGCCGGCGGGTTGT
CAAAAAAGAAAAAACGCGATTTGCAATCGCAACTGGATACGCTTACAGCGGAGGAGGGATGGGAACTTGCCGTTTTTAGT
TTACTGGAACTTGGCGAAGTGGATACCGCTACGCTGTCCTCTCTGAAGCGTTTTATGCAACAGGCGATAGACAACGATGA
AATGCCCTTATCGCAGTGGTTCAGACGCGTGGCAGACTGGCCGGATCGCTGTGAACGGGTCCGTATTTTGCTAAGAGCAG
TAGCCTTTGAACTTAGCATATGCATCGAACCCTCGGAGCAAAGTCGTTTGGCCGCAGCATTAGTACGTTTGCGTCGTTTG
CTGTTATTCCTTGGCCTTGAAAAAGAGTGCCAGCGTGAGGAGTGGATTTGCCAGTTGCCGCCTAATACATTACTGCCGCT
ACTACTCGATATTATTTGTGAGCGCTGGCTTTTCAGTGATTGGTTGCTTGATAGACTTACCGCTATAGTTTCTTCATCGA
AGATGTTCAATCGGTTACTCCAACAACTTGATGCGCAGTTTATGCTGATACCCGATAACTGTTTTAACGACGAAGATCAA
CGTGAACAAATTCTCGAAACGCTTCGTGAAGTAAAGATAAATCAGGTTTTATTCTGA

Upstream 100 bases:

>100_bases
CCTGGTTTCTCTCCCGATCAGGCTGAACTTTCCTCAACACGATATGCCGTTGAATTTTCACTTTCTCGTCATTTCAACGC
GTTACTGAAATGGTTACGTA

Downstream 100 bases:

>100_bases
TACCTGGCTTTCAATATTTAGGTAAATTGGCTTTCTGGCTCATCATGAGGCGTCAGGATGGATTGGGATCTCATTACTGA
ACGTAATATTCAGCTTTTTA

Product: type III secretion system apparatus protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MVKIKEVAMNIKINEIKMTPPTAFTPGQVIEEQEVISPSMLALQELQETTGAALYETMEEIGMALSGKLRENYKFTDAEK
LERRQQALLRLIKQIQEDNGATLRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFS
LLELGEVDTATLSSLKRFMQQAIDNDEMPLSQWFRRVADWPDRCERVRILLRAVAFELSICIEPSEQSRLAAALVRLRRL
LLFLGLEKECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQ
REQILETLREVKINQVLF

Sequences:

>Translated_338_residues
MVKIKEVAMNIKINEIKMTPPTAFTPGQVIEEQEVISPSMLALQELQETTGAALYETMEEIGMALSGKLRENYKFTDAEK
LERRQQALLRLIKQIQEDNGATLRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFS
LLELGEVDTATLSSLKRFMQQAIDNDEMPLSQWFRRVADWPDRCERVRILLRAVAFELSICIEPSEQSRLAAALVRLRRL
LLFLGLEKECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQ
REQILETLREVKINQVLF
>Mature_338_residues
MVKIKEVAMNIKINEIKMTPPTAFTPGQVIEEQEVISPSMLALQELQETTGAALYETMEEIGMALSGKLRENYKFTDAEK
LERRQQALLRLIKQIQEDNGATLRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFS
LLELGEVDTATLSSLKRFMQQAIDNDEMPLSQWFRRVADWPDRCERVRILLRAVAFELSICIEPSEQSRLAAALVRLRRL
LLFLGLEKECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQ
REQILETLREVKINQVLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSAL_SALTY (P74854)

Other databases:

- EMBL:   Y09357
- EMBL:   AE006468
- RefSeq:   NP_460377.1
- PRIDE:   P74854
- GeneID:   1252930
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM1412
- NMPDR:   fig|99287.1.peg.1368
- HOGENOM:   HBG671302
- OMA:   YKFTDAE
- ProtClustDB:   PRK15345
- BioCyc:   STYP99287:STM1412-MONOMER
- GO:   GO:0009405
- GO:   GO:0046903
- InterPro:   IPR010812
- InterPro:   IPR013351
- TIGRFAMs:   TIGR02511

Pfam domain/function: PF07201 HrpJ

EC number: NA

Molecular weight: Translated: 38901; Mature: 38901

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKIKEVAMNIKINEIKMTPPTAFTPGQVIEEQEVISPSMLALQELQETTGAALYETMEE
CCCHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IGMALSGKLRENYKFTDAEKLERRQQALLRLIKQIQEDNGATLRPLTEENSDPDLQNAYQ
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHH
IIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFSLLELGEVDTATLSSLKRFMQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
QAIDNDEMPLSQWFRRVADWPDRCERVRILLRAVAFELSICIEPSEQSRLAAALVRLRRL
HHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHH
LLFLGLEKECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLL
HHHHCCCHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQLDAQFMLIPDNCFNDEDQREQILETLREVKINQVLF
HHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVKIKEVAMNIKINEIKMTPPTAFTPGQVIEEQEVISPSMLALQELQETTGAALYETMEE
CCCHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IGMALSGKLRENYKFTDAEKLERRQQALLRLIKQIQEDNGATLRPLTEENSDPDLQNAYQ
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHH
IIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFSLLELGEVDTATLSSLKRFMQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
QAIDNDEMPLSQWFRRVADWPDRCERVRILLRAVAFELSICIEPSEQSRLAAALVRLRRL
HHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHH
LLFLGLEKECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLL
HHHHCCCHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQLDAQFMLIPDNCFNDEDQREQILETLREVKINQVLF
HHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609