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The map label for this gene is ydjN [H]

Identifier: 16764718

GI number: 16764718

Start: 1450542

End: 1451888

Strand: Reverse

Name: ydjN [H]

Synonym: STM1368

Alternate gene names: 16764718

Gene position: 1451888-1450542 (Counterclockwise)

Preceding gene: 16764726

Following gene: 16764714

Centisome position: 29.89

GC content: 48.03

Gene sequence:

>1347_bases
ATGGTTGTTACGCTCGCGTATATCGCACTTTTTTTGGTTTTCTCGTGGGTCATCTTGAGAATTAATCAAAAAAGCGATTC
CCTGTCGAAAAGCGTTTTTATCGCTATCTTTTTAGGGGCTGTTATTGGTTTATCCCTGCATTTTATTTCAGCAAATCACA
CTAAAACTATTATCGAATGGTACAGCATCGTCGGCAATGGTTACGTCCACCTGCTAAAACTGGTCGCTATACCGCTAATT
TTTATTTCTATTCTTTCCGCCATCAATAAACTGGAAAATAGTGCCGGCATCGGAAAAATGTCGCTGACGATCGTCGGATG
CATGTTATGCCTGGTGATGGTTGCCGGTTTTATCGGATTACTGACCGCTCATGTGCTGGGGCTTGACGCCAGCGCTTTTG
TGCACATGCCGTCAATGTTAACTACGGAAGAAGTCAATAAGACTGCCGCGGTGTCGATTCCCCAGTTAGTGACATCGCTG
ATTCCGACTAATATTTTTCTTGATCTTACGGGAGCCAGAAGTGTTTCCGTTATCGGCATCGTTATCTTCACGCTAATAGC
GGGGATCGCTCTGTTAAAGGTCAAAAAAGAGGCGCCGGAAGAAGGTCAGAAATTAAGCGCAGGCATTAACGCTATTCAGA
TATGGGTCATGAAGATGGTACGTATCGTTATTGCATTAACGCCCTATGGCGTCATGGCATTAATGACCACCGTATTTTCA
TCATACCGCCTTGAACAATTCGCCAGCTTACTTGGTTTTATCGGTGCCTGTTACATCGCGATTTTTATGATGTTTATCGT
GCATGCCATCTTGCTGATCCTCAGCGGTAATAATCCAGCGCGTTATTTCAGAATGGTCTGGCCCGTCTTAACCTTTGCGT
TTGTTTCCCGCAGCAGCGCAGCCTCTATCCCGCTGGCCATTTCCGCCCAGGAAAAATTTGGCGTACAAAGCACCATTGCC
AATATTTCCGCCTCGTTTGGCTCCAGTATGGGGCAAAATGGCTGCGCCGGGATTTATCCGGCTATTATGGTAGCGATGAT
TGCGCCCACCATCGGCATCGATCCGCTCTCGCTGCATTTTCTGGCCGCGATGTTGCCTGCCATTGCGCTAGGGTCTATTG
GCGTAGCCGGCGTCGGCGGCGGTGGTACGTTCGCGGCGCTGATTGTCCTGTCGACGTTGAATTTTCCCGTTGCGCTGGTC
GGTATTTTTATTGCCATCGAACCTATCGTTGATATGGCCCGCACGGCACTGAACGTTAACGGATCGATGATGTCAGGGGT
GCTGGCTAACCGTATTTTGAATAATCATACGGCTGACGACATGCCGGCGGTTATTGACAGACCTTAG

Upstream 100 bases:

>100_bases
CTTTATAATCCGCTGCGGTTCTATAACTCAGTTTGAGCTATAGGTTTATGTAAACTCTTTCCGGCATTTCAGGTGCTGAA
TGAGGCAAGAGGCTTAAAAT

Downstream 100 bases:

>100_bases
TTTTTTACGCGCCCGGAAAAGAAAAACCCTTAAGTCTGTTCAATACAGGCTTAAGGGTTCCGGCCCCATCCGGCGCTTAT
CTCCGGCACTCTTAATGGCT

Product: Na+-dicarboxylate symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MVVTLAYIALFLVFSWVILRINQKSDSLSKSVFIAIFLGAVIGLSLHFISANHTKTIIEWYSIVGNGYVHLLKLVAIPLI
FISILSAINKLENSAGIGKMSLTIVGCMLCLVMVAGFIGLLTAHVLGLDASAFVHMPSMLTTEEVNKTAAVSIPQLVTSL
IPTNIFLDLTGARSVSVIGIVIFTLIAGIALLKVKKEAPEEGQKLSAGINAIQIWVMKMVRIVIALTPYGVMALMTTVFS
SYRLEQFASLLGFIGACYIAIFMMFIVHAILLILSGNNPARYFRMVWPVLTFAFVSRSSAASIPLAISAQEKFGVQSTIA
NISASFGSSMGQNGCAGIYPAIMVAMIAPTIGIDPLSLHFLAAMLPAIALGSIGVAGVGGGGTFAALIVLSTLNFPVALV
GIFIAIEPIVDMARTALNVNGSMMSGVLANRILNNHTADDMPAVIDRP

Sequences:

>Translated_448_residues
MVVTLAYIALFLVFSWVILRINQKSDSLSKSVFIAIFLGAVIGLSLHFISANHTKTIIEWYSIVGNGYVHLLKLVAIPLI
FISILSAINKLENSAGIGKMSLTIVGCMLCLVMVAGFIGLLTAHVLGLDASAFVHMPSMLTTEEVNKTAAVSIPQLVTSL
IPTNIFLDLTGARSVSVIGIVIFTLIAGIALLKVKKEAPEEGQKLSAGINAIQIWVMKMVRIVIALTPYGVMALMTTVFS
SYRLEQFASLLGFIGACYIAIFMMFIVHAILLILSGNNPARYFRMVWPVLTFAFVSRSSAASIPLAISAQEKFGVQSTIA
NISASFGSSMGQNGCAGIYPAIMVAMIAPTIGIDPLSLHFLAAMLPAIALGSIGVAGVGGGGTFAALIVLSTLNFPVALV
GIFIAIEPIVDMARTALNVNGSMMSGVLANRILNNHTADDMPAVIDRP
>Mature_448_residues
MVVTLAYIALFLVFSWVILRINQKSDSLSKSVFIAIFLGAVIGLSLHFISANHTKTIIEWYSIVGNGYVHLLKLVAIPLI
FISILSAINKLENSAGIGKMSLTIVGCMLCLVMVAGFIGLLTAHVLGLDASAFVHMPSMLTTEEVNKTAAVSIPQLVTSL
IPTNIFLDLTGARSVSVIGIVIFTLIAGIALLKVKKEAPEEGQKLSAGINAIQIWVMKMVRIVIALTPYGVMALMTTVFS
SYRLEQFASLLGFIGACYIAIFMMFIVHAILLILSGNNPARYFRMVWPVLTFAFVSRSSAASIPLAISAQEKFGVQSTIA
NISASFGSSMGQNGCAGIYPAIMVAMIAPTIGIDPLSLHFLAAMLPAIALGSIGVAGVGGGGTFAALIVLSTLNFPVALV
GIFIAIEPIVDMARTALNVNGSMMSGVLANRILNNHTADDMPAVIDRP

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI223468564, Length=282, Percent_Identity=26.241134751773, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI223468566, Length=284, Percent_Identity=26.056338028169, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI5032093, Length=284, Percent_Identity=26.056338028169, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI66773030, Length=252, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI21314632, Length=267, Percent_Identity=24.3445692883895, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1788024, Length=441, Percent_Identity=45.3514739229025, Blast_Score=362, Evalue=1e-101,
Organism=Escherichia coli, GI1790514, Length=406, Percent_Identity=24.6305418719212, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1789947, Length=423, Percent_Identity=22.6950354609929, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193206654, Length=439, Percent_Identity=23.9179954441913, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17537407, Length=435, Percent_Identity=22.5287356321839, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71996953, Length=467, Percent_Identity=21.1991434689507, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71983106, Length=456, Percent_Identity=23.4649122807018, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI71983099, Length=456, Percent_Identity=23.2456140350877, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24583025, Length=474, Percent_Identity=23.8396624472574, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17137668, Length=474, Percent_Identity=23.8396624472574, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24583023, Length=474, Percent_Identity=23.8396624472574, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 47435; Mature: 47435

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVTLAYIALFLVFSWVILRINQKSDSLSKSVFIAIFLGAVIGLSLHFISANHTKTIIEW
CEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHH
YSIVGNGYVHLLKLVAIPLIFISILSAINKLENSAGIGKMSLTIVGCMLCLVMVAGFIGL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LTAHVLGLDASAFVHMPSMLTTEEVNKTAAVSIPQLVTSLIPTNIFLDLTGARSVSVIGI
HHHHHHCCCCHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
VIFTLIAGIALLKVKKEAPEEGQKLSAGINAIQIWVMKMVRIVIALTPYGVMALMTTVFS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SYRLEQFASLLGFIGACYIAIFMMFIVHAILLILSGNNPARYFRMVWPVLTFAFVSRSSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
ASIPLAISAQEKFGVQSTIANISASFGSSMGQNGCAGIYPAIMVAMIAPTIGIDPLSLHF
CCCCEEEECHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH
LAAMLPAIALGSIGVAGVGGGGTFAALIVLSTLNFPVALVGIFIAIEPIVDMARTALNVN
HHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GSMMSGVLANRILNNHTADDMPAVIDRP
HHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVVTLAYIALFLVFSWVILRINQKSDSLSKSVFIAIFLGAVIGLSLHFISANHTKTIIEW
CEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHH
YSIVGNGYVHLLKLVAIPLIFISILSAINKLENSAGIGKMSLTIVGCMLCLVMVAGFIGL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LTAHVLGLDASAFVHMPSMLTTEEVNKTAAVSIPQLVTSLIPTNIFLDLTGARSVSVIGI
HHHHHHCCCCHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
VIFTLIAGIALLKVKKEAPEEGQKLSAGINAIQIWVMKMVRIVIALTPYGVMALMTTVFS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SYRLEQFASLLGFIGACYIAIFMMFIVHAILLILSGNNPARYFRMVWPVLTFAFVSRSSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
ASIPLAISAQEKFGVQSTIANISASFGSSMGQNGCAGIYPAIMVAMIAPTIGIDPLSLHF
CCCCEEEECHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH
LAAMLPAIALGSIGVAGVGGGGTFAALIVLSTLNFPVALVGIFIAIEPIVDMARTALNVN
HHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GSMMSGVLANRILNNHTADDMPAVIDRP
HHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]