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The map label for this gene is lppB [H]

Identifier: 16764726

GI number: 16764726

Start: 1459057

End: 1459296

Strand: Reverse

Name: lppB [H]

Synonym: STM1376

Alternate gene names: 16764726

Gene position: 1459296-1459057 (Counterclockwise)

Preceding gene: 16764727

Following gene: 16764718

Centisome position: 30.04

GC content: 47.08

Gene sequence:

>240_bases
ATGAACCGTACTAACCAGCTGATCTTAGGTGCAGTAGTTCTGGGTTCCACGTTACTGGCAGGTTGTTCAAGCAACGCTAA
AATCGATCAGTTGTCTTCCGATGTACAGACGCTGAGCGCTAAAGTTGAGCAACTGAGTAATGACGTAAATGCAATGCGTT
CCGACGTTCAGGCTGCTAAAGACGATGCTGCTCGCGCGAACCAACGTCTGGACAACAAAGTATTCCGCATCTGTAAATAA

Upstream 100 bases:

>100_bases
ACTAAATACCGTAAGTAATAGTACCTGCGTAATAAAAATGGCGCACATCGTGCGCCATTTTTTTTACCCACATAACCACA
CAAAGTATAATGTTATTGTT

Downstream 100 bases:

>100_bases
TTTGACGCACAATATAAAATGGCGCACATCGTGCGCCATTTTTTTGTCCGTCGTTTGCTGCAAAGGCTACTGCGTCGCGC
GCGTTTGCCCCTCTTCCCCG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Murein-lipoprotein 2 [H]

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MNRTNQLILGAVVLGSTLLAGCSSNAKIDQLSSDVQTLSAKVEQLSNDVNAMRSDVQAAKDDAARANQRLDNKVFRICK

Sequences:

>Translated_79_residues
MNRTNQLILGAVVLGSTLLAGCSSNAKIDQLSSDVQTLSAKVEQLSNDVNAMRSDVQAAKDDAARANQRLDNKVFRICK
>Mature_79_residues
MNRTNQLILGAVVLGSTLLAGCSSNAKIDQLSSDVQTLSAKVEQLSNDVNAMRSDVQAAKDDAARANQRLDNKVFRICK

Specific function: Interacts with the peptidoglycan both covalently and noncovalently [H]

COG id: COG4238

COG function: function code M; Murein lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Cell outer membrane; Peptidoglycan-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Lpp family [H]

Homologues:

Organism=Escherichia coli, GI1787967, Length=77, Percent_Identity=81.8181818181818, Blast_Score=124, Evalue=1e-30,
Organism=Escherichia coli, GI1789390, Length=72, Percent_Identity=47.2222222222222, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006817
- InterPro:   IPR016367
- InterPro:   IPR023147 [H]

Pfam domain/function: PF04728 LPP [H]

EC number: NA

Molecular weight: Translated: 8492; Mature: 8492

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTNQLILGAVVLGSTLLAGCSSNAKIDQLSSDVQTLSAKVEQLSNDVNAMRSDVQAAK
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDAARANQRLDNKVFRICK
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRTNQLILGAVVLGSTLLAGCSSNAKIDQLSSDVQTLSAKVEQLSNDVNAMRSDVQAAK
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDAARANQRLDNKVFRICK
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA