Click here to switch to the map view.

The map label for this gene is flgA

Identifier: 16764529

GI number: 16764529

Start: 1257431

End: 1258090

Strand: Reverse

Name: flgA

Synonym: STM1173

Alternate gene names: 16764529

Gene position: 1258090-1257431 (Counterclockwise)

Preceding gene: 16764541

Following gene: 16764528

Centisome position: 25.9

GC content: 58.03

Gene sequence:

>660_bases
ATGCAAACGTTAAAACGAGGATTCGCCGTGGCGGCTTTGCTGTTCAGCCCCCTGACAATGGCGCAGGACATCAACGCCCA
GCTGACCACGTGGTTTTCCCAGCGTCTGGCTGGCTTCAGCGACGAGGTGGTTGTCACGCTCCGTTCATCGCCCAATCTGC
TACCGAGCTGCGAACAGCCAGCCTTCAGCATGACGGGCAGCGCGAAGCTGTGGGGCAACGTCAATGTGGTGGCGCGCTGC
GCCAATGAAAAACGTTATTTGCAGGTGAATGTGCAAGCGACCGGCAATTATGTCGCCGTTGCCGCGCCCATCGCGCGCGG
CGGAAAATTGACGCCGGCCAACGTCACGCTAAAACGTGGCAGGCTGGATCAGTTACCGCCGCGGACGGTACTGGATATCC
GTCAGATTCAGGATGCCGTCAGTTTGCGCGATCTCGCTCCCGGGCAGCCGGTACAGCTTACGATGATACGTCAGGCCTGG
CGCGTCAAAGCGGGGCAACGAGTACAGGTCATCGCCAATGGCGAGGGGTTCAGCGTCAATGCGGAAGGTCAGGCGATGAA
TAATGCTGCCGTCGCGCAAAATGCGCGCGTGCGCATGACATCGGGTCAAATCGTGAGTGGAACCGTCGATTCTGATGGGA
ATATTCTTATTAACCTATAA

Upstream 100 bases:

>100_bases
TTATCGCCGGAATAAACGCAAAATGCGTCGCTATTTATTGCGTTGATGCTTGCTTCACACGGGTAGAATCCTGTCATGAC
ATCAACCAGGGGGAAGTACC

Downstream 100 bases:

>100_bases
TTGTGTAAAGATTTTGTCGCGGCTGCCGATGAGATATTCAACCATGATGGTAGCTGGCCGCTACAACGTAACCCTCGATG
AGGATAAATAAATGAGCATT

Product: flagellar basal body P-ring biosynthesis protein FlgA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MQTLKRGFAVAALLFSPLTMAQDINAQLTTWFSQRLAGFSDEVVVTLRSSPNLLPSCEQPAFSMTGSAKLWGNVNVVARC
ANEKRYLQVNVQATGNYVAVAAPIARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPGQPVQLTMIRQAW
RVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVRMTSGQIVSGTVDSDGNILINL

Sequences:

>Translated_219_residues
MQTLKRGFAVAALLFSPLTMAQDINAQLTTWFSQRLAGFSDEVVVTLRSSPNLLPSCEQPAFSMTGSAKLWGNVNVVARC
ANEKRYLQVNVQATGNYVAVAAPIARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPGQPVQLTMIRQAW
RVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVRMTSGQIVSGTVDSDGNILINL
>Mature_219_residues
MQTLKRGFAVAALLFSPLTMAQDINAQLTTWFSQRLAGFSDEVVVTLRSSPNLLPSCEQPAFSMTGSAKLWGNVNVVARC
ANEKRYLQVNVQATGNYVAVAAPIARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPGQPVQLTMIRQAW
RVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVRMTSGQIVSGTVDSDGNILINL

Specific function: Involved in the assembly process of the P-ring formation. It may associate with flgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly

COG id: COG1261

COG function: function code NO; Flagellar basal body P-ring biosynthesis protein

Gene ontology:

Cell location: Periplasm (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgA family

Homologues:

Organism=Escherichia coli, GI1787312, Length=219, Percent_Identity=71.2328767123288, Blast_Score=310, Evalue=4e-86,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGA_SALTY (P40131)

Other databases:

- EMBL:   D25292
- EMBL:   AE006468
- RefSeq:   NP_460144.1
- ProteinModelPortal:   P40131
- PRIDE:   P40131
- GeneID:   1252691
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM1173
- NMPDR:   fig|99287.1.peg.1135
- HOGENOM:   HBG730519
- OMA:   GKAMNNA
- ProtClustDB:   PRK07018
- BioCyc:   STYP99287:STM1173-MONOMER
- InterPro:   IPR017585
- InterPro:   IPR013974
- SMART:   SM00858
- TIGRFAMs:   TIGR03170

Pfam domain/function: PF08666 SAF

EC number: NA

Molecular weight: Translated: 23556; Mature: 23556

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLKRGFAVAALLFSPLTMAQDINAQLTTWFSQRLAGFSDEVVVTLRSSPNLLPSCEQP
CCCHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
AFSMTGSAKLWGNVNVVARCANEKRYLQVNVQATGNYVAVAAPIARGGKLTPANVTLKRG
CEECCCCEEEECCCEEEEEECCCCEEEEEEEEECCCEEEEEECCCCCCEECCCCEEEECC
RLDQLPPRTVLDIRQIQDAVSLRDLAPGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVN
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHEEHHHHHCCCCCEEEEEECCCCEEEE
AEGQAMNNAAVAQNARVRMTSGQIVSGTVDSDGNILINL
CCCCCCCCHHHHCCCEEEEECCEEEEEEECCCCCEEEEC
>Mature Secondary Structure
MQTLKRGFAVAALLFSPLTMAQDINAQLTTWFSQRLAGFSDEVVVTLRSSPNLLPSCEQP
CCCHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
AFSMTGSAKLWGNVNVVARCANEKRYLQVNVQATGNYVAVAAPIARGGKLTPANVTLKRG
CEECCCCEEEECCCEEEEEECCCCEEEEEEEEECCCEEEEEECCCCCCEECCCCEEEECC
RLDQLPPRTVLDIRQIQDAVSLRDLAPGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVN
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHEEHHHHHCCCCCEEEEEECCCCEEEE
AEGQAMNNAAVAQNARVRMTSGQIVSGTVDSDGNILINL
CCCCCCCCHHHHCCCEEEEECCEEEEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8200538; 11677609