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The map label for this gene is yccD

Identifier: 16764469

GI number: 16764469

Start: 1198694

End: 1198999

Strand: Reverse

Name: yccD

Synonym: STM1111

Alternate gene names: 16764469

Gene position: 1198999-1198694 (Counterclockwise)

Preceding gene: 16764470

Following gene: 16764468

Centisome position: 24.68

GC content: 55.23

Gene sequence:

>306_bases
ATGGCTAACATCACTGTCACCTTTACCATCACCGAATTTTGTTTGCACACCGGCGTGACGGAAGAGGAGCTAAACGAAAT
CGTCGGACTTGGCGTAATTGAGCCTTACGAAGACGATAACGCCGACTGGCAATTCGACGATCGCGCAGCGAGCGTGGTAC
AACGCGCGCTACGCTTACGCGAGGAGCTGGCGCTCGACTGGCCTGGGATCGCGGTCGCGTTAACGCTGCTGGAAGAGAAT
TCACGGCTGCGCGAAGAAAACCGGTTACTGCTGCAACGCCTTTCTCGCTTTATCTCGCATCCCTAA

Upstream 100 bases:

>100_bases
TTATGCCGCCGAAACCTGACGAGAAAACAGCTGCCCTGTGGCAACAACTGGCGGACGCGCAGTCGTCCTTTGACCCACGC
CAGCAATGGGGGAAAGCATA

Downstream 100 bases:

>100_bases
TCCACGATAAAGGCAATAAACCGAGGGTGGGCTTTCTGCCCACCCCGGATTTACATGCACCCGGTATAATACCAGAATGC
CTCTGACATACTTCCCTCAA

Product: chaperone-modulator protein CbpM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MANITVTFTITEFCLHTGVTEEELNEIVGLGVIEPYEDDNADWQFDDRAASVVQRALRLREELALDWPGIAVALTLLEEN
SRLREENRLLLQRLSRFISHP

Sequences:

>Translated_101_residues
MANITVTFTITEFCLHTGVTEEELNEIVGLGVIEPYEDDNADWQFDDRAASVVQRALRLREELALDWPGIAVALTLLEEN
SRLREENRLLLQRLSRFISHP
>Mature_100_residues
ANITVTFTITEFCLHTGVTEEELNEIVGLGVIEPYEDDNADWQFDDRAASVVQRALRLREELALDWPGIAVALTLLEENS
RLREENRLLLQRLSRFISHP

Specific function: Interacts with CbpA and inhibits both the DnaJ-like co- chaperone activity and the DNA binding activity of CbpA. Together with CbpA, modulates the activity of the DnaK chaperone system. Does not inhibit the co-chaperone activity of DnaJ

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbpM family

Homologues:

Organism=Escherichia coli, GI1787234, Length=101, Percent_Identity=74.2574257425743, Blast_Score=159, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CBPM_SALA4 (B5F1Z4)

Other databases:

- EMBL:   CP001138
- RefSeq:   YP_002145980.1
- GeneID:   6796539
- GenomeReviews:   CP001138_GR
- KEGG:   sea:SeAg_B1070
- HOGENOM:   HBG416362
- OMA:   LELEWEG
- ProtClustDB:   PRK10265
- HAMAP:   MF_01155
- InterPro:   IPR022835

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11595; Mature: 11464

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANITVTFTITEFCLHTGVTEEELNEIVGLGVIEPYEDDNADWQFDDRAASVVQRALRLR
CCCEEEEEHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
EELALDWPGIAVALTLLEENSRLREENRLLLQRLSRFISHP
HHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANITVTFTITEFCLHTGVTEEELNEIVGLGVIEPYEDDNADWQFDDRAASVVQRALRLR
CCEEEEEHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
EELALDWPGIAVALTLLEENSRLREENRLLLQRLSRFISHP
HHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA