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The map label for this gene is iraM [H]

Identifier: 16764468

GI number: 16764468

Start: 1197678

End: 1198040

Strand: Reverse

Name: iraM [H]

Synonym: STM1110

Alternate gene names: 16764468

Gene position: 1198040-1197678 (Counterclockwise)

Preceding gene: 16764469

Following gene: 16764458

Centisome position: 24.66

GC content: 38.02

Gene sequence:

>363_bases
ATGGAATGGAAGGTCGTTGATACAGTTATAAGTCCCTCTACCGGAGTGTCGTTCTCATGCATACATAGCCTAAAAAATCT
TAGATTGACCTTATGGTATCAGGCAGATGTTTACATGCCTCCAGGTAGCATTATCATCCCCTTTAATAAGGGGGTCTTAA
TAAACGATAAACTTTATCCCGTTACTGTTTACAACGTTACCAGGTTTAATCCTGTTCTATGGAAATCGCTTAAAGAAAAT
AGCCATTGTCCTGGTAACTGCAATCCTAAATCAGAAGCCTGCAGTTATCCTTTCGAGTGTCTGGTATCCGTTTGTCCATT
TGGTTTAACCAGAAATATTCAAATAGATAATAAGAAAGTTTAG

Upstream 100 bases:

>100_bases
TTTTCAACGAGTTATGTTTCTCAGATTTTCATCTATCCTGAATAGGCTTGCGGAAAATGTAATTTACACCATTGACTATT
TCACTTAAAAGGTTTCTGTA

Downstream 100 bases:

>100_bases
GAAATAAAGTATGCATTAGCCATACTACTGATTAAGTGTATTCGCGCACGTTTGCAGTATTTTGCAGTTAAATATGTTTG
ATATAAAAATTGTACAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Sigma S-regulator rssC [H]

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MEWKVVDTVISPSTGVSFSCIHSLKNLRLTLWYQADVYMPPGSIIIPFNKGVLINDKLYPVTVYNVTRFNPVLWKSLKEN
SHCPGNCNPKSEACSYPFECLVSVCPFGLTRNIQIDNKKV

Sequences:

>Translated_120_residues
MEWKVVDTVISPSTGVSFSCIHSLKNLRLTLWYQADVYMPPGSIIIPFNKGVLINDKLYPVTVYNVTRFNPVLWKSLKEN
SHCPGNCNPKSEACSYPFECLVSVCPFGLTRNIQIDNKKV
>Mature_120_residues
MEWKVVDTVISPSTGVSFSCIHSLKNLRLTLWYQADVYMPPGSIIIPFNKGVLINDKLYPVTVYNVTRFNPVLWKSLKEN
SHCPGNCNPKSEACSYPFECLVSVCPFGLTRNIQIDNKKV

Specific function: Involved in the stabilization of the sigma stress factor rpoS [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iraM/rssC family [H]

Homologues:

Organism=Escherichia coli, GI1787407, Length=109, Percent_Identity=40.3669724770642, Blast_Score=101, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014448 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13569; Mature: 13569

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWKVVDTVISPSTGVSFSCIHSLKNLRLTLWYQADVYMPPGSIIIPFNKGVLINDKLYP
CCEEEEEEEECCCCCCCHHHHHHHCCCEEEEEEEEEEEECCCCEEEECCCCEEECCCEEE
VTVYNVTRFNPVLWKSLKENSHCPGNCNPKSEACSYPFECLVSVCPFGLTRNIQIDNKKV
EEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCC
>Mature Secondary Structure
MEWKVVDTVISPSTGVSFSCIHSLKNLRLTLWYQADVYMPPGSIIIPFNKGVLINDKLYP
CCEEEEEEEECCCCCCCHHHHHHHCCCEEEEEEEEEEEECCCCEEEECCCCEEECCCEEE
VTVYNVTRFNPVLWKSLKENSHCPGNCNPKSEACSYPFECLVSVCPFGLTRNIQIDNKKV
EEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA