| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16764396
Identifier: 16764396
GI number: 16764396
Start: 1123434
End: 1124000
Strand: Direct
Name: 16764396
Synonym: STM1036
Alternate gene names: NA
Gene position: 1123434-1124000 (Clockwise)
Preceding gene: 16764395
Following gene: 16764397
Centisome position: 23.13
GC content: 51.32
Gene sequence:
>567_bases ATGGAGGTAAAGGGGCTTAAAGAGGCCATTTCAGTACTTAAAGAACTTGATCGTGGATATGTGACCCGGGCAAAAATTCG GGCCATTAACCGGGTGGCAAAACGGGTGGTCAGCGTGTCAGTTCGCAGTGCTGCTGCTTTGGTGGTGGCCGGAGACAACC GACGGCAGGGTATTCCCGTCAGAACGGTAAGACGTCGCGCCAGAGTCAGGCTGGCCAGAGCGGACAAGCCTTTTGCCAAC ATTTATGTGAACTGTGATCCGCTGACTGCCATCAGGTTACTGAGTTCGCCACCATCAACCCCGATGAGGGGGAGAAAAGG TAAGCCGCTACGTATAGGAAAATACCGTTTTGACCGGGGGTTTATTGCGCAGGCTCCGAACGGATGGTGGCAGGTATTTG AGCGTTCCGGTGCCGGAAGATACCCACTTAATGTGGTGAAAATCCCGGTTGCTGATGCATTGCGCCATGCGTTCAACACG CAGGTTGTTTTACAGATGAAAACGGAGATGCCCAAAGAGCTGAAGCATGAAATCAGTTATGAACTGAGGAGATTCACTAA AAAATGA
Upstream 100 bases:
>100_bases CCGCGCCGGGGAGACAGGGTGGTACTGCGGGGCAGTGAGTTTACCGTGACCCGTATCCGGCGTTTTAACGGTAAGCCACA ACTGACTCTGGAGGAGAACA
Downstream 100 bases:
>100_bases CCCGACACAGTGCAGTACGGCAGGCCATTATTGCCGCATTAAAAAAGACCGATGATGGCTCCACCACGTTTTTTGACGGT CGTCCGGTCGTGGTGGAGGA
Product: minor tail protein
Products: NA
Alternate protein names: Phage Tail Component; Minor Tail Protein Z Of Prophage; Gifsy-1 Prophagei VmtZ
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MEVKGLKEAISVLKELDRGYVTRAKIRAINRVAKRVVSVSVRSAAALVVAGDNRRQGIPVRTVRRRARVRLARADKPFAN IYVNCDPLTAIRLLSSPPSTPMRGRKGKPLRIGKYRFDRGFIAQAPNGWWQVFERSGAGRYPLNVVKIPVADALRHAFNT QVVLQMKTEMPKELKHEISYELRRFTKK
Sequences:
>Translated_188_residues MEVKGLKEAISVLKELDRGYVTRAKIRAINRVAKRVVSVSVRSAAALVVAGDNRRQGIPVRTVRRRARVRLARADKPFAN IYVNCDPLTAIRLLSSPPSTPMRGRKGKPLRIGKYRFDRGFIAQAPNGWWQVFERSGAGRYPLNVVKIPVADALRHAFNT QVVLQMKTEMPKELKHEISYELRRFTKK >Mature_188_residues MEVKGLKEAISVLKELDRGYVTRAKIRAINRVAKRVVSVSVRSAAALVVAGDNRRQGIPVRTVRRRARVRLARADKPFAN IYVNCDPLTAIRLLSSPPSTPMRGRKGKPLRIGKYRFDRGFIAQAPNGWWQVFERSGAGRYPLNVVKIPVADALRHAFNT QVVLQMKTEMPKELKHEISYELRRFTKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21374; Mature: 21374
Theoretical pI: Translated: 11.98; Mature: 11.98
Prosite motif: PS50096 IQ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVKGLKEAISVLKELDRGYVTRAKIRAINRVAKRVVSVSVRSAAALVVAGDNRRQGIPV CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCH RTVRRRARVRLARADKPFANIYVNCDPLTAIRLLSSPPSTPMRGRKGKPLRIGKYRFDRG HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCCC FIAQAPNGWWQVFERSGAGRYPLNVVKIPVADALRHAFNTQVVLQMKTEMPKELKHEISY CEECCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHCCEEEEEEHHHCCHHHHHHHHH ELRRFTKK HHHHHHCC >Mature Secondary Structure MEVKGLKEAISVLKELDRGYVTRAKIRAINRVAKRVVSVSVRSAAALVVAGDNRRQGIPV CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCH RTVRRRARVRLARADKPFANIYVNCDPLTAIRLLSSPPSTPMRGRKGKPLRIGKYRFDRG HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCCC FIAQAPNGWWQVFERSGAGRYPLNVVKIPVADALRHAFNTQVVLQMKTEMPKELKHEISY CEECCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHCCEEEEEEHHHCCHHHHHHHHH ELRRFTKK HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA