| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16764397
Identifier: 16764397
GI number: 16764397
Start: 1123997
End: 1124398
Strand: Direct
Name: 16764397
Synonym: STM1037
Alternate gene names: NA
Gene position: 1123997-1124398 (Clockwise)
Preceding gene: 16764396
Following gene: 16764398
Centisome position: 23.14
GC content: 55.47
Gene sequence:
>402_bases ATGACCCGACACAGTGCAGTACGGCAGGCCATTATTGCCGCATTAAAAAAGACCGATGATGGCTCCACCACGTTTTTTGA CGGTCGTCCGGTCGTGGTGGAGGAGGATGAGTTACCTGCGGTGGCGGTGTACCTGAGTGATGCTCAGTATACCGGTCCTG AGGTGGACGGTGATATCTGGAGCGCGGTGCTACATGTGGAAGTATTTCTGAAAGCCACTGCACCGGACAGCGCCCTGGAT GAACAGATGGAGAACAGGGTGTATCCGGCACTGGGGAGCGTGGCGGGACTGGGTGACATCATCCGGACAATGTCGGCGCA GGGGTATAACTATCAGCGAGACGATGAAATGGCGATGTGGGGGTCAGCCGATCTGAGTTACGACATCACCTATTCCATGT AG
Upstream 100 bases:
>100_bases GCCATGCGTTCAACACGCAGGTTGTTTTACAGATGAAAACGGAGATGCCCAAAGAGCTGAAGCATGAAATCAGTTATGAA CTGAGGAGATTCACTAAAAA
Downstream 100 bases:
>100_bases AGGAAAAGAGAATGACAGACACGACAATTCCTAATCCACTTGCGCCGGTAAAAGGCGCAAATACCACATTCTGGATGTAC AACAGCGAGGGTGATCCGTT
Product: minor tail protein
Products: NA
Alternate protein names: Phage Minor Tail Protein U; Tail Component Of Prophage; Gifsy-1 Prophage VmtU; Minor Tail U
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MTRHSAVRQAIIAALKKTDDGSTTFFDGRPVVVEEDELPAVAVYLSDAQYTGPEVDGDIWSAVLHVEVFLKATAPDSALD EQMENRVYPALGSVAGLGDIIRTMSAQGYNYQRDDEMAMWGSADLSYDITYSM
Sequences:
>Translated_133_residues MTRHSAVRQAIIAALKKTDDGSTTFFDGRPVVVEEDELPAVAVYLSDAQYTGPEVDGDIWSAVLHVEVFLKATAPDSALD EQMENRVYPALGSVAGLGDIIRTMSAQGYNYQRDDEMAMWGSADLSYDITYSM >Mature_132_residues TRHSAVRQAIIAALKKTDDGSTTFFDGRPVVVEEDELPAVAVYLSDAQYTGPEVDGDIWSAVLHVEVFLKATAPDSALDE QMENRVYPALGSVAGLGDIIRTMSAQGYNYQRDDEMAMWGSADLSYDITYSM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14573; Mature: 14442
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRHSAVRQAIIAALKKTDDGSTTFFDGRPVVVEEDELPAVAVYLSDAQYTGPEVDGDIW CCHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHH SAVLHVEVFLKATAPDSALDEQMENRVYPALGSVAGLGDIIRTMSAQGYNYQRDDEMAMW HHHHHHHHEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE GSADLSYDITYSM CCCCCCEEEEECC >Mature Secondary Structure TRHSAVRQAIIAALKKTDDGSTTFFDGRPVVVEEDELPAVAVYLSDAQYTGPEVDGDIW CHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHH SAVLHVEVFLKATAPDSALDEQMENRVYPALGSVAGLGDIIRTMSAQGYNYQRDDEMAMW HHHHHHHHEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE GSADLSYDITYSM CCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA