| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is 16764381
Identifier: 16764381
GI number: 16764381
Start: 1110765
End: 1111376
Strand: Direct
Name: 16764381
Synonym: STM1021
Alternate gene names: NA
Gene position: 1110765-1111376 (Clockwise)
Preceding gene: 16764380
Following gene: 39980852
Centisome position: 22.87
GC content: 58.66
Gene sequence:
>612_bases ATGGCTAAATTACCGCGCCGTAAGTGCGCAAACAAAGAATGCCGCCAGTGGTTTCACCCGATACGCGAGGGGCAGATCGT TTGCTCGTACCAGTGCGCCAGCGCCGTCGGCAAAGAACAGACCAGAAAAGCTCGCGAAGCCGCGCAACGTAAGGCGCAAT CCCTTCAGCGCGCCGCTGAGAAAAAAGAACGCGCCGCCTGGCGCCAGCGGAAAGCCGCGGTTAAGCCGCTGAAACACTGG ATTGACTTGACGCAGCGCGCCGTAAATGACATTTGCCGCGAAACCGAACTGGCAGAAGGACTCGGTTGCATCTCCTGTGG AACGAAGACGGCATTCGCATGGCATGCAGGCCATTACAGGAGTACGGCCGCCGCCGGGCATCTGCGCTTCACTCGCTTCA ACATCCATCTTCAGTGTGATGTCTACAACGTCTACAAATCAGGGAACATCGAAGCATATCGTGCCGCGCTGGTTGAGCGT TACGGGGAGGCGGCGGTGCTGGCACTCGAGAACAATAACACCCCGCACCGCTGGACGGTCGAGGAGCTGAAGGAAATCAG GCTCGCGGCACTGGCGGATCTGCGTGCGCTAAAAAAGCTGGAGGCCGCATGA
Upstream 100 bases:
>100_bases ACCCTGACTTCATTACCTGGACTGTCAGCGCGAAATTACCTGAATATGCACACCGGGTGCGGACGCCAAAATCCTTACGC CAAAAGGTCTGGGGGTGAAC
Downstream 100 bases:
>100_bases AACCAGAACTGATCGAGATACTCCGCATGCGCTGGTTGCGTCTCCGAATTTATCGATACCGGGGATCTTTTCCTGTGGCA TATCGCATTCTTCGTAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHW IDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVYNVYKSGNIEAYRAALVER YGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
Sequences:
>Translated_203_residues MAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHW IDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVYNVYKSGNIEAYRAALVER YGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA >Mature_202_residues AKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWI DLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVYNVYKSGNIEAYRAALVERY GEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23086; Mature: 22955
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAE CCCCCCHHHCCHHHHHHHHHHHCCCEEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH KKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHEEECCCHH STAAAGHLRFTRFNIHLQCDVYNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHRWTV HHHHHCCEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEECH EELKEIRLAALADLRALKKLEAA HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAE CCCCCHHHCCHHHHHHHHHHHCCCEEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH KKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHEEECCCHH STAAAGHLRFTRFNIHLQCDVYNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHRWTV HHHHHCCEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEECH EELKEIRLAALADLRALKKLEAA HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA