| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16764380
Identifier: 16764380
GI number: 16764380
Start: 1109954
End: 1110556
Strand: Direct
Name: 16764380
Synonym: STM1020
Alternate gene names: NA
Gene position: 1109954-1110556 (Clockwise)
Preceding gene: 16764379
Following gene: 16764381
Centisome position: 22.85
GC content: 52.24
Gene sequence:
>603_bases ATGGCGCACGAATTACAACTCATCAAGCAGTCATCTGGAATTCTGATCCCCGCTACGCCGGAGACCAGCGAAATTCTGCA GTCAAAAATTAAACTCGGTGCCGTGCTGGTGGCTGAGTTCCGTCAGGTTAGGAATCCTGCATTCCATCGCCGCTTTTTCG CGTTGCTTAATCTTGGGTTTGAATACTGGGAACCCACCGGCGGCACCATTTCTGCCAATGAACGCAAACTGGTAAACGGT TATGCAAAGTTTCTCGCTGCATATGGCGGGAATGAGAGCGCATTACTGGATGCGGCTGAACAGTATCTGGAACAGATTGC AAACCGCCGGGTAACAAACGGAATTAGCCTCTGTAAATCTTTCGATGCATACCGCGCATGGGTGACGGTTGAGGCTGGCC ACTATGACGCCATCCAGTTACCGGACGGCACCCTTCGCAAACATCCCCGCAGCATCGCTTTTTCCAGCATGGATGAGGTC GAATTTCAGCAGTTGTATAAATCCGCGCTTGATGTGCTCTGGCGGTGGATTTTATCACGTACATTTCGTACTCAGCGCGA GGCGGAGAACGCCGCCGCCCAGCTAATGAGCTTTGCGGGGTGA
Upstream 100 bases:
>100_bases ATGGGCTCTAATAATTGACTTAACAATAAGCACGCAATCATAATTATCGCACTGGCCTGAACAACCAGTAACCTGACAAT TATGCGCCACGGAGAATACC
Downstream 100 bases:
>100_bases TGGCGATGAAATACTCCTGGTTCCATCATCACGACTGCACAACCGAGCAGGCCGACACGCTGATATCGGATTATCAGAAG CGGGGCGTAAGGACAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGTISANERKLVNG YAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEV EFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
Sequences:
>Translated_200_residues MAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGTISANERKLVNG YAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEV EFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG >Mature_199_residues AHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGTISANERKLVNGY AKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVE FQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22531; Mature: 22400
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGF CCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCH EYWEPTGGTISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKS HHCCCCCCEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSR HHHHHEEEEEECCCCCEEECCCCHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH TFRTQREAENAAAQLMSFAG HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGF CCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCH EYWEPTGGTISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKS HHCCCCCCEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSR HHHHHEEEEEECCCCCEEECCCCHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH TFRTQREAENAAAQLMSFAG HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA