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The map label for this gene is yejH [H]

Identifier: 16764262

GI number: 16764262

Start: 969999

End: 971582

Strand: Direct

Name: yejH [H]

Synonym: STM0900

Alternate gene names: 16764262

Gene position: 969999-971582 (Clockwise)

Preceding gene: 16764261

Following gene: 16764263

Centisome position: 19.97

GC content: 52.9

Gene sequence:

>1584_bases
ATGCTGCGCCGCGACTGGAAGTCGCATAATACTTTTATGGTGTATGCACCCACTGGCAGCGGCAAAACGGGGTTAGCAGC
GTTTATCGTTGACGGTTTCGTCAGTCGCGGAATGCGGGTGATGTTCTGCGTGCCCTACCAGATACTGATCACCCAGACCG
CCAGCCGTTTCATTGAGTACGGATTATCGGGTGACGAAATCGGGTACGTATGGGCCAGTCATCCGAACCATAATCCGGCG
CTGAAAATCCAGATAGCCAGCGCTGACACGCTTATTCGTCGTGAATTTCCCGACAATATCGACCTGTTGATCATCGACGA
AGCACATCTGCGCAAAAAGCGTATTTTGCAGGACATTGAGCGTCTGCGCGCCAGCGGAGTAAAAGTAATTGGCCTGTCGG
GTACACCGTTTTCACCGTTTCTGGGCAAATACTATGACCGACTGATTAAGCCGACCACCATCGGCGAGTTAATCCAGCGC
GGCGATCTGAGTAAATACGAATTTTACGCTCCGACAAAGCCGGATTTGAAAGGCGTAAAAACCAAGTCTTCGCTTGAGTA
CGGCAGCGATTACAACGAAGCGCAGCTGGCTGAAATCATGTGCGGATCTACGCTGGTGGGCGACATCGTACAGAACTGGC
TGGAGAATGGCCGGGATCTGCCTACCATCGCTTTCTGCGTCAACGTAGCCCACGCCAATTACCTGACAATCCAGTTTAAC
CTGGCGGGTATTAATGCTGAGGTCATGACTGCCGACACTCCAGTGGATGAGCGTCAGACCATCATTCACCGCTTTGAAAC
CGGTGCAACGAAAATCATCGTCAGCGTGGGCGTGCTGGTTGCCGGATTCGACAGTGACGTTCGCTGTATCATCTACGCAA
GACCAACCAAAAGCGAAATTCGCTGGCTGCAGGCGATCGGCCGCGGTCTTCGCACCGCACCGGGTAAAGAATCCTGCCTC
ATCTTTGATCACAGCGGCACTGTGCACCGTCTGGGTTATCCGGATTCAATCGAATATGACGATCTTCCCGGCAAGTCTGA
CGGCATGGAGGAAAGCGCGCGCCGCTCCAGTCAGGAACGGGCCGAAAAACTCCCGCGCGAATGCTCACAATGTCATTACA
TGAAACCCGCTGGTGTGTACGTCTGCCCGAAATGCGGACATAAGCCGCTGGCAGGTGAAGACGTCGACACCGACACAGGG
CGTAAACTCAAAAAGCTGGGTAAAAATCAGCATCGACCCACAAAGGCACAGAAACAAGCCTGGTGGAGTCAGATCAAATT
TTATCAGCGCCAGCGCGTATCTCAGGGGAAAAGGCCCGTCAGTGATGGCTGGTGCGCACACACCTTCCGGGAAAAATTCG
GTGAATGGCCGAATGACCTGAGTGACTTCCCGATGGAAATTACCCCGGAGGTAAGCAACTACATCAGACACAAACTTATC
AGATATGCAAAAGGAAAGGGGAAGGCGGCCGCACCTGCTGAAACTGCCAGCCCCATTCCCGACTCAGACATTACCCACAA
GGTAATAAGTGCAAAACGCCAGGTAGAGAATATTCGCAGTATGCTTGGGAGAAGAACAGCGTGA

Upstream 100 bases:

>100_bases
AATCCATGAAAACCACATCACAAAATCATTATCGCATCGATATGGGGGCTGGACAATGCTGACCATCACGCCAAATTTTG
CCCAGGAACGCGCGCTGAAC

Downstream 100 bases:

>100_bases
AAACAGCAGAAGCGGCGAAAGGCCGCTGGCCTGAAATTTTAGAGCACTTCGACCTGCCGCCGATAACCGGAAAAAATCAC
TACAGGGGCGAATGCCCTGT

Product: helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MLRRDWKSHNTFMVYAPTGSGKTGLAAFIVDGFVSRGMRVMFCVPYQILITQTASRFIEYGLSGDEIGYVWASHPNHNPA
LKIQIASADTLIRREFPDNIDLLIIDEAHLRKKRILQDIERLRASGVKVIGLSGTPFSPFLGKYYDRLIKPTTIGELIQR
GDLSKYEFYAPTKPDLKGVKTKSSLEYGSDYNEAQLAEIMCGSTLVGDIVQNWLENGRDLPTIAFCVNVAHANYLTIQFN
LAGINAEVMTADTPVDERQTIIHRFETGATKIIVSVGVLVAGFDSDVRCIIYARPTKSEIRWLQAIGRGLRTAPGKESCL
IFDHSGTVHRLGYPDSIEYDDLPGKSDGMEESARRSSQERAEKLPRECSQCHYMKPAGVYVCPKCGHKPLAGEDVDTDTG
RKLKKLGKNQHRPTKAQKQAWWSQIKFYQRQRVSQGKRPVSDGWCAHTFREKFGEWPNDLSDFPMEITPEVSNYIRHKLI
RYAKGKGKAAAPAETASPIPDSDITHKVISAKRQVENIRSMLGRRTA

Sequences:

>Translated_527_residues
MLRRDWKSHNTFMVYAPTGSGKTGLAAFIVDGFVSRGMRVMFCVPYQILITQTASRFIEYGLSGDEIGYVWASHPNHNPA
LKIQIASADTLIRREFPDNIDLLIIDEAHLRKKRILQDIERLRASGVKVIGLSGTPFSPFLGKYYDRLIKPTTIGELIQR
GDLSKYEFYAPTKPDLKGVKTKSSLEYGSDYNEAQLAEIMCGSTLVGDIVQNWLENGRDLPTIAFCVNVAHANYLTIQFN
LAGINAEVMTADTPVDERQTIIHRFETGATKIIVSVGVLVAGFDSDVRCIIYARPTKSEIRWLQAIGRGLRTAPGKESCL
IFDHSGTVHRLGYPDSIEYDDLPGKSDGMEESARRSSQERAEKLPRECSQCHYMKPAGVYVCPKCGHKPLAGEDVDTDTG
RKLKKLGKNQHRPTKAQKQAWWSQIKFYQRQRVSQGKRPVSDGWCAHTFREKFGEWPNDLSDFPMEITPEVSNYIRHKLI
RYAKGKGKAAAPAETASPIPDSDITHKVISAKRQVENIRSMLGRRTA
>Mature_527_residues
MLRRDWKSHNTFMVYAPTGSGKTGLAAFIVDGFVSRGMRVMFCVPYQILITQTASRFIEYGLSGDEIGYVWASHPNHNPA
LKIQIASADTLIRREFPDNIDLLIIDEAHLRKKRILQDIERLRASGVKVIGLSGTPFSPFLGKYYDRLIKPTTIGELIQR
GDLSKYEFYAPTKPDLKGVKTKSSLEYGSDYNEAQLAEIMCGSTLVGDIVQNWLENGRDLPTIAFCVNVAHANYLTIQFN
LAGINAEVMTADTPVDERQTIIHRFETGATKIIVSVGVLVAGFDSDVRCIIYARPTKSEIRWLQAIGRGLRTAPGKESCL
IFDHSGTVHRLGYPDSIEYDDLPGKSDGMEESARRSSQERAEKLPRECSQCHYMKPAGVYVCPKCGHKPLAGEDVDTDTG
RKLKKLGKNQHRPTKAQKQAWWSQIKFYQRQRVSQGKRPVSDGWCAHTFREKFGEWPNDLSDFPMEITPEVSNYIRHKLI
RYAKGKGKAAAPAETASPIPDSDITHKVISAKRQVENIRSMLGRRTA

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788511, Length=373, Percent_Identity=28.4182305630027, Blast_Score=100, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6320539, Length=282, Percent_Identity=31.2056737588652, Blast_Score=105, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 59156; Mature: 59156

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRDWKSHNTFMVYAPTGSGKTGLAAFIVDGFVSRGMRVMFCVPYQILITQTASRFIEY
CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHH
GLSGDEIGYVWASHPNHNPALKIQIASADTLIRREFPDNIDLLIIDEAHLRKKRILQDIE
CCCCCCEEEEEECCCCCCCEEEEEEECCHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHH
RLRASGVKVIGLSGTPFSPFLGKYYDRLIKPTTIGELIQRGDLSKYEFYAPTKPDLKGVK
HHHHCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCC
TKSSLEYGSDYNEAQLAEIMCGSTLVGDIVQNWLENGRDLPTIAFCVNVAHANYLTIQFN
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEEE
LAGINAEVMTADTPVDERQTIIHRFETGATKIIVSVGVLVAGFDSDVRCIIYARPTKSEI
EEECCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCEEEEEECCCHHHH
RWLQAIGRGLRTAPGKESCLIFDHSGTVHRLGYPDSIEYDDLPGKSDGMEESARRSSQER
HHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AEKLPRECSQCHYMKPAGVYVCPKCGHKPLAGEDVDTDTGRKLKKLGKNQHRPTKAQKQA
HHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHH
WWSQIKFYQRQRVSQGKRPVSDGWCAHTFREKFGEWPNDLSDFPMEITPEVSNYIRHKLI
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCEECHHHHHHHHHHHH
RYAKGKGKAAAPAETASPIPDSDITHKVISAKRQVENIRSMLGRRTA
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLRRDWKSHNTFMVYAPTGSGKTGLAAFIVDGFVSRGMRVMFCVPYQILITQTASRFIEY
CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHH
GLSGDEIGYVWASHPNHNPALKIQIASADTLIRREFPDNIDLLIIDEAHLRKKRILQDIE
CCCCCCEEEEEECCCCCCCEEEEEEECCHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHH
RLRASGVKVIGLSGTPFSPFLGKYYDRLIKPTTIGELIQRGDLSKYEFYAPTKPDLKGVK
HHHHCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCC
TKSSLEYGSDYNEAQLAEIMCGSTLVGDIVQNWLENGRDLPTIAFCVNVAHANYLTIQFN
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEEE
LAGINAEVMTADTPVDERQTIIHRFETGATKIIVSVGVLVAGFDSDVRCIIYARPTKSEI
EEECCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCEEEEEECCCHHHH
RWLQAIGRGLRTAPGKESCLIFDHSGTVHRLGYPDSIEYDDLPGKSDGMEESARRSSQER
HHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AEKLPRECSQCHYMKPAGVYVCPKCGHKPLAGEDVDTDTGRKLKKLGKNQHRPTKAQKQA
HHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHH
WWSQIKFYQRQRVSQGKRPVSDGWCAHTFREKFGEWPNDLSDFPMEITPEVSNYIRHKLI
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCEECHHHHHHHHHHHH
RYAKGKGKAAAPAETASPIPDSDITHKVISAKRQVENIRSMLGRRTA
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]