| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is 16764263
Identifier: 16764263
GI number: 16764263
Start: 971579
End: 972547
Strand: Direct
Name: 16764263
Synonym: STM0901
Alternate gene names: NA
Gene position: 971579-972547 (Clockwise)
Preceding gene: 16764262
Following gene: 16764264
Centisome position: 20.0
GC content: 52.01
Gene sequence:
>969_bases GTGAAAACAGCAGAAGCGGCGAAAGGCCGCTGGCCTGAAATTTTAGAGCACTTCGACCTGCCGCCGATAACCGGAAAAAA TCACTACAGGGGCGAATGCCCTGTATGCGGTGCACGTGGCAAGTTCCGCATTGACGACCGCGACGGTGCCGGGACATGGA TCTGTGTATGTGGTAGTGGCGATGGCATGAAACTTGTCACCCTGACACAGGGGAAGCCATTTAACGAGATTTGTACCGAA ATAGACCGTCTGATCGGAAATGATTACCAGCGGGTGAAAATCCCGGTAAACAGCAGCGCCACCAGCTTACGCAAGCGTGT GTTGAGCAAGTTCTCTAAGCTGGAGGCACTGCGTGGCACATCCGGTGCTGCGTATCTCAATTCTCGTGGAATATTTAACC TTCCTGCTGAGGCGATCCGGTTCAATGCCAGGCAGAGACACAACGGGTGTGTATTCCAGTCTCTTTATTCCCTTGCTACT GACGATAAAGGGGAGTTGTGCTATCTGCATCAGACCCTGCTTGATGGTGCCAAAAAAGCAGACATCGGTAGCAGTTCAAA GCGCCTCAAATCCCTGCAGGAAGATAACTATCTGGATCACGCTCGTTCAGTAGCTATCCGCATGTTTCCTGTCGCCAGCA CTCTGGGTATCGCCGAAGGCATCGAAACGGCGCTGTCAGCGCACCAGATTTATAAAGTGAACACCTGGGCAACCATTAAC AGCGGCTTTATGAAAAAGTTTCGCGTACCAGCAGGAGTTCTGCACCTGATTATTTTTGCCGACCGCGACGAGAACAGCGC CACCGGGCTGGCTGCGGCTTACGAATGCGCTCATGCCAATCTGATGGCAAAGAACGATCTGCAGCGCGTCAGTGTGTACT GGCCTGATCACGGTGATTTCAACAATATGCTCATGAATGGCGATCAGGTTCGTGAGCTGGTTTTCCACAAGAAAAAGGTG GCTGCGTAA
Upstream 100 bases:
>100_bases AAACTGCCAGCCCCATTCCCGACTCAGACATTACCCACAAGGTAATAAGTGCAAAACGCCAGGTAGAGAATATTCGCAGT ATGCTTGGGAGAAGAACAGC
Downstream 100 bases:
>100_bases TGCGTACAGATAACAACGAACATAAAGCACTATTCACCATCCCGACGGCAGCGCACAGCTCCGCCCTGGTAAACGTCAAA CCTCTGCCTGAGCAACGTAG
Product: phage DNA primase
Products: NA
Alternate protein names: Phage DNA Primase; Plasmid And Phage DNA Primase; DNA Primase; Prophage DNA Primase; Prophage Primase; Helicase Domain Protein; Nucleoside Triphosphatase; Inner Membrane Protein Phage Origin; Alpha Replication I; Helicase Domain-Containing Protein
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKTAEAAKGRWPEILEHFDLPPITGKNHYRGECPVCGARGKFRIDDRDGAGTWICVCGSGDGMKLVTLTQGKPFNEICTE IDRLIGNDYQRVKIPVNSSATSLRKRVLSKFSKLEALRGTSGAAYLNSRGIFNLPAEAIRFNARQRHNGCVFQSLYSLAT DDKGELCYLHQTLLDGAKKADIGSSSKRLKSLQEDNYLDHARSVAIRMFPVASTLGIAEGIETALSAHQIYKVNTWATIN SGFMKKFRVPAGVLHLIIFADRDENSATGLAAAYECAHANLMAKNDLQRVSVYWPDHGDFNNMLMNGDQVRELVFHKKKV AA
Sequences:
>Translated_322_residues MKTAEAAKGRWPEILEHFDLPPITGKNHYRGECPVCGARGKFRIDDRDGAGTWICVCGSGDGMKLVTLTQGKPFNEICTE IDRLIGNDYQRVKIPVNSSATSLRKRVLSKFSKLEALRGTSGAAYLNSRGIFNLPAEAIRFNARQRHNGCVFQSLYSLAT DDKGELCYLHQTLLDGAKKADIGSSSKRLKSLQEDNYLDHARSVAIRMFPVASTLGIAEGIETALSAHQIYKVNTWATIN SGFMKKFRVPAGVLHLIIFADRDENSATGLAAAYECAHANLMAKNDLQRVSVYWPDHGDFNNMLMNGDQVRELVFHKKKV AA >Mature_322_residues MKTAEAAKGRWPEILEHFDLPPITGKNHYRGECPVCGARGKFRIDDRDGAGTWICVCGSGDGMKLVTLTQGKPFNEICTE IDRLIGNDYQRVKIPVNSSATSLRKRVLSKFSKLEALRGTSGAAYLNSRGIFNLPAEAIRFNARQRHNGCVFQSLYSLAT DDKGELCYLHQTLLDGAKKADIGSSSKRLKSLQEDNYLDHARSVAIRMFPVASTLGIAEGIETALSAHQIYKVNTWATIN SGFMKKFRVPAGVLHLIIFADRDENSATGLAAAYECAHANLMAKNDLQRVSVYWPDHGDFNNMLMNGDQVRELVFHKKKV AA
Specific function: Unknown
COG id: COG4643
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35638; Mature: 35638
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTAEAAKGRWPEILEHFDLPPITGKNHYRGECPVCGARGKFRIDDRDGAGTWICVCGSG CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCEEEEEEECC DGMKLVTLTQGKPFNEICTEIDRLIGNDYQRVKIPVNSSATSLRKRVLSKFSKLEALRGT CCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC SGAAYLNSRGIFNLPAEAIRFNARQRHNGCVFQSLYSLATDDKGELCYLHQTLLDGAKKA CCCEEECCCCCCCCCHHHHHCCCHHCCCCHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCC DIGSSSKRLKSLQEDNYLDHARSVAIRMFPVASTLGIAEGIETALSAHQIYKVNTWATIN CCCCHHHHHHHHHHCCHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHEEEEECEEEEC SGFMKKFRVPAGVLHLIIFADRDENSATGLAAAYECAHANLMAKNDLQRVSVYWPDHGDF HHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCHHCCCCCEEEEEEECCCCCH NNMLMNGDQVRELVFHKKKVAA HHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTAEAAKGRWPEILEHFDLPPITGKNHYRGECPVCGARGKFRIDDRDGAGTWICVCGSG CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCEEEEEEECC DGMKLVTLTQGKPFNEICTEIDRLIGNDYQRVKIPVNSSATSLRKRVLSKFSKLEALRGT CCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC SGAAYLNSRGIFNLPAEAIRFNARQRHNGCVFQSLYSLATDDKGELCYLHQTLLDGAKKA CCCEEECCCCCCCCCHHHHHCCCHHCCCCHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCC DIGSSSKRLKSLQEDNYLDHARSVAIRMFPVASTLGIAEGIETALSAHQIYKVNTWATIN CCCCHHHHHHHHHHCCHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHEEEEECEEEEC SGFMKKFRVPAGVLHLIIFADRDENSATGLAAAYECAHANLMAKNDLQRVSVYWPDHGDF HHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCHHCCCCCEEEEEEECCCCCH NNMLMNGDQVRELVFHKKKVAA HHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA