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The map label for this gene is yxjC [H]

Identifier: 16764222

GI number: 16764222

Start: 933178

End: 933603

Strand: Reverse

Name: yxjC [H]

Synonym: STM0860

Alternate gene names: 16764222

Gene position: 933603-933178 (Counterclockwise)

Preceding gene: 16764224

Following gene: 16764221

Centisome position: 19.22

GC content: 43.9

Gene sequence:

>426_bases
ATGTATTCATTACTGATGCTGGTCGCTTATCGTGGTTACAGTGTGATCCTTTTTGCTCCGCTGGTAGCACTTGGCGCAGT
TCTGTTCACCCGTCCAGTGACGGTCGCCCCGGTTTTCAGTGATATATTTATGGATAAGTTGATCGGTTTTGTAAAACTTT
ATTTTCCTGTCTTTCTGCTGGGTGCAGTATTTGGCAAGCTGATTGAACTTGCTGGTTTTTACTACTCAATTGTCAGTGCT
GTGACCTGTATGGTGGGCCAGAACAAAGCCATGCCGATGATTATTCTTGTATGCGCTTTATTGACCTATGGAGGCGTATC
ATTGTTTGTGGTGGCGTTTGCCAATCTGTTCTTTACTTGGCTGATTCCACATATTTACGGTGATCAGTTTATGATAAATC
TGCCGGGGCTGAAAAAACCGCTGTAA

Upstream 100 bases:

>100_bases
ATAGCCTGTCTGATCTAAAATGGAGATCAGAAAAATATGACACAAGCTGTTGCATAACATGGATAAAATGGGTAGTCATG
CTAGCGAGATAAGACAATGA

Downstream 100 bases:

>100_bases
ACGGGTTAACCTGATGACCACGGGGAGCAGGTATTAGCATCTACGTTACAACGGTTCCGACAATATGTCTGACCTGACCC
CCTGTCAGCGGTCACCAGCG

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MYSLLMLVAYRGYSVILFAPLVALGAVLFTRPVTVAPVFSDIFMDKLIGFVKLYFPVFLLGAVFGKLIELAGFYYSIVSA
VTCMVGQNKAMPMIILVCALLTYGGVSLFVVAFANLFFTWLIPHIYGDQFMINLPGLKKPL

Sequences:

>Translated_141_residues
MYSLLMLVAYRGYSVILFAPLVALGAVLFTRPVTVAPVFSDIFMDKLIGFVKLYFPVFLLGAVFGKLIELAGFYYSIVSA
VTCMVGQNKAMPMIILVCALLTYGGVSLFVVAFANLFFTWLIPHIYGDQFMINLPGLKKPL
>Mature_141_residues
MYSLLMLVAYRGYSVILFAPLVALGAVLFTRPVTVAPVFSDIFMDKLIGFVKLYFPVFLLGAVFGKLIELAGFYYSIVSA
VTCMVGQNKAMPMIILVCALLTYGGVSLFVVAFANLFFTWLIPHIYGDQFMINLPGLKKPL

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 15578; Mature: 15578

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSLLMLVAYRGYSVILFAPLVALGAVLFTRPVTVAPVFSDIFMDKLIGFVKLYFPVFLL
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAVFGKLIELAGFYYSIVSAVTCMVGQNKAMPMIILVCALLTYGGVSLFVVAFANLFFTW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
LIPHIYGDQFMINLPGLKKPL
HHHHHCCCCEEEECCCCCCCC
>Mature Secondary Structure
MYSLLMLVAYRGYSVILFAPLVALGAVLFTRPVTVAPVFSDIFMDKLIGFVKLYFPVFLL
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAVFGKLIELAGFYYSIVSAVTCMVGQNKAMPMIILVCALLTYGGVSLFVVAFANLFFTW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
LIPHIYGDQFMINLPGLKKPL
HHHHHCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377; 10568751 [H]