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The map label for this gene is yacH [H]

Identifier: 16763547

GI number: 16763547

Start: 183846

End: 185468

Strand: Reverse

Name: yacH [H]

Synonym: STM0157

Alternate gene names: 16763547

Gene position: 185468-183846 (Counterclockwise)

Preceding gene: 16763549

Following gene: 16763546

Centisome position: 3.82

GC content: 57.36

Gene sequence:

>1623_bases
ATGACGTTGCCCTTTAAACCCCATCTCATTGCCCTTGTGTGCAGTGCCGGGTTATTTGCCGCTTCGGGCGTACTGTATGT
TAAAAGCCGCGCTCCCGAAGCGCCCGCGCAGGCGGCAGCTCCCGCCTCTGAGCCAACGCAGACCGCTGTGCCCGCGCCTG
TCGCGAAAACGACCTTTACCACTGCGCAAATTGATCAATGGGTCGCGCCTGTTGCGCTTTATCCCGATGCCCTGCTTTCG
CAGGTGCTCATGGCCTCCACCTACCCGGCGAACGTAGTTCAGGCCGTCCAGTGGTCGCGCGATAACCCTACGCTGCAGGG
CGATGCCGCTATTCAGGCGGTGGCCAGCCAACCGTGGGACCCCAGCGTCAAATCGCTGGTCGCCTTTCCCCAGTTGATGG
CGCTTATGGGCGAGAATCCGCAATGGGTGCAAAACCTGGGCGATGCGTTCTTAGCCCAGCCACAGGATGTGATGGATGCG
GTGCAAAGGCTGCGTCTGCTCGCTCAACAAACCGGTTCGCTAAAATCCACGCCACAGCAAACCGTCACCAGCGTGCCGAA
GTCCAGCGCTTCTACCGCCGTCACGACGACAACCACCACATCCGCCAGTACGCCAGCGACACCGTCGACCGTTATAAAAA
TTGAACCCGCGAATCCGCAGGTGGTGTACGTGCCGAACTATAACCCCGCGACGGTGTATGGCGCCTGGCCCAATACCGCT
TATCCGCCGGTGTATTTACCGCCCCCTCCGGGGCAGCAGTTTGCCGACAGTTTTGTTAAAGGTTTTGGTTATAGTCTGGG
CGTCGCCACCACCTATGCGTTGTTCAGCAGCATAGACTGGGATGATGACGATCATCACCACCATGACGACGACCACCATG
ATGATGATTACCATCATGGTGGTAACGGTTATCAACATAATGGCGATAATATCAACATCAATGTCAATAATTTCAACCGG
ATATCCGGGCAAAACCTGCCGGGCCAAACGATGGGCTGGCAGCATAATCCCGCCTGGCGCAATGGCGTCCCCTATCCGAA
TAATACCGTTGCGCAACGGTTCCATCCCACCAATGTTAGCGGCGGGTTAAGCGCAACGCAGCAAGCGCCAGTGTCTCGCG
ACAGTCAGCGCCAGGCGGCCATGACGCAATTTCAACAGCGCACGCATACGGCCAACGCTTCTTTGCCAGCGCCAGGCACC
CGCGATGCCCAGCGTAAGGCGGCATCGCAGCAGTTAAATCAAATTGCCCAGCGTAATAATTACCGTGGCTATGACGGAAC
ACAAAACAGCAGTCGTCGCGAGGCGGCGCAGCAGACACTGAATAAATCCACCACGCAGCAGCATCGTTCCGAGCTGAAGG
CTAAAGCCCAGCAGCACCCTGTTTCACAACAGCAGAGAGACACCGCCCGCCAGCGTATTGAATCCTCTACGCCGCAGCAG
CGTCAGGCATTTCGCCAGAATATGCACGCCAATGTGTTTAGCGGGAACGACAGTCGATCGCCGTCATGGCAATCGCAACA
GCTACGCGGCCTGGAAAGCCGTCGCGGCAGTCACTTAAACACCGAGCAACGCGCCGCCGCGCGGGAACATTTTTCTGAAC
ATCATGAATTTCATCGCCGTTAA

Upstream 100 bases:

>100_bases
TAAAAATTAAACTATCGTCCCTTTATACTCACGCCAAACTGCACCCCGTCGGCGGCAGGCATAATGACCATAGCGATTCT
CTGGAATCGGGAGAGATAAA

Downstream 100 bases:

>100_bases
CCGGAGCAGATAATGAAAAAGGTTATGTTAAGCGCTCTGTTACTGTCGTTACCCTTGCTGGGCTACGCGCAGGAACGGTT
CCCCTCCCCGGAAGCGGCCG

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 539

Protein sequence:

>540_residues
MTLPFKPHLIALVCSAGLFAASGVLYVKSRAPEAPAQAAAPASEPTQTAVPAPVAKTTFTTAQIDQWVAPVALYPDALLS
QVLMASTYPANVVQAVQWSRDNPTLQGDAAIQAVASQPWDPSVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDA
VQRLRLLAQQTGSLKSTPQQTVTSVPKSSASTAVTTTTTTSASTPATPSTVIKIEPANPQVVYVPNYNPATVYGAWPNTA
YPPVYLPPPPGQQFADSFVKGFGYSLGVATTYALFSSIDWDDDDHHHHDDDHHDDDYHHGGNGYQHNGDNININVNNFNR
ISGQNLPGQTMGWQHNPAWRNGVPYPNNTVAQRFHPTNVSGGLSATQQAPVSRDSQRQAAMTQFQQRTHTANASLPAPGT
RDAQRKAASQQLNQIAQRNNYRGYDGTQNSSRREAAQQTLNKSTTQQHRSELKAKAQQHPVSQQQRDTARQRIESSTPQQ
RQAFRQNMHANVFSGNDSRSPSWQSQQLRGLESRRGSHLNTEQRAAAREHFSEHHEFHRR

Sequences:

>Translated_540_residues
MTLPFKPHLIALVCSAGLFAASGVLYVKSRAPEAPAQAAAPASEPTQTAVPAPVAKTTFTTAQIDQWVAPVALYPDALLS
QVLMASTYPANVVQAVQWSRDNPTLQGDAAIQAVASQPWDPSVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDA
VQRLRLLAQQTGSLKSTPQQTVTSVPKSSASTAVTTTTTTSASTPATPSTVIKIEPANPQVVYVPNYNPATVYGAWPNTA
YPPVYLPPPPGQQFADSFVKGFGYSLGVATTYALFSSIDWDDDDHHHHDDDHHDDDYHHGGNGYQHNGDNININVNNFNR
ISGQNLPGQTMGWQHNPAWRNGVPYPNNTVAQRFHPTNVSGGLSATQQAPVSRDSQRQAAMTQFQQRTHTANASLPAPGT
RDAQRKAASQQLNQIAQRNNYRGYDGTQNSSRREAAQQTLNKSTTQQHRSELKAKAQQHPVSQQQRDTARQRIESSTPQQ
RQAFRQNMHANVFSGNDSRSPSWQSQQLRGLESRRGSHLNTEQRAAAREHFSEHHEFHRR
>Mature_539_residues
TLPFKPHLIALVCSAGLFAASGVLYVKSRAPEAPAQAAAPASEPTQTAVPAPVAKTTFTTAQIDQWVAPVALYPDALLSQ
VLMASTYPANVVQAVQWSRDNPTLQGDAAIQAVASQPWDPSVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDAV
QRLRLLAQQTGSLKSTPQQTVTSVPKSSASTAVTTTTTTSASTPATPSTVIKIEPANPQVVYVPNYNPATVYGAWPNTAY
PPVYLPPPPGQQFADSFVKGFGYSLGVATTYALFSSIDWDDDDHHHHDDDHHDDDYHHGGNGYQHNGDNININVNNFNRI
SGQNLPGQTMGWQHNPAWRNGVPYPNNTVAQRFHPTNVSGGLSATQQAPVSRDSQRQAAMTQFQQRTHTANASLPAPGTR
DAQRKAASQQLNQIAQRNNYRGYDGTQNSSRREAAQQTLNKSTTQQHRSELKAKAQQHPVSQQQRDTARQRIESSTPQQR
QAFRQNMHANVFSGNDSRSPSWQSQQLRGLESRRGSHLNTEQRAAAREHFSEHHEFHRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786308, Length=570, Percent_Identity=57.3684210526316, Blast_Score=564, Evalue=1e-162,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021728 [H]

Pfam domain/function: PF11737 DUF3300 [H]

EC number: NA

Molecular weight: Translated: 59230; Mature: 59099

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPFKPHLIALVCSAGLFAASGVLYVKSRAPEAPAQAAAPASEPTQTAVPAPVAKTTFT
CCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHH
TAQIDQWVAPVALYPDALLSQVLMASTYPANVVQAVQWSRDNPTLQGDAAIQAVASQPWD
HHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCC
PSVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDAVQRLRLLAQQTGSLKSTPQQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
TVTSVPKSSASTAVTTTTTTSASTPATPSTVIKIEPANPQVVYVPNYNPATVYGAWPNTA
HHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEECCCCCC
YPPVYLPPPPGQQFADSFVKGFGYSLGVATTYALFSSIDWDDDDHHHHDDDHHDDDYHHG
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GNGYQHNGDNININVNNFNRISGQNLPGQTMGWQHNPAWRNGVPYPNNTVAQRFHPTNVS
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
GGLSATQQAPVSRDSQRQAAMTQFQQRTHTANASLPAPGTRDAQRKAASQQLNQIAQRNN
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
YRGYDGTQNSSRREAAQQTLNKSTTQQHRSELKAKAQQHPVSQQQRDTARQRIESSTPQQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHH
RQAFRQNMHANVFSGNDSRSPSWQSQQLRGLESRRGSHLNTEQRAAAREHFSEHHEFHRR
HHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLPFKPHLIALVCSAGLFAASGVLYVKSRAPEAPAQAAAPASEPTQTAVPAPVAKTTFT
CCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHH
TAQIDQWVAPVALYPDALLSQVLMASTYPANVVQAVQWSRDNPTLQGDAAIQAVASQPWD
HHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCC
PSVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDAVQRLRLLAQQTGSLKSTPQQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
TVTSVPKSSASTAVTTTTTTSASTPATPSTVIKIEPANPQVVYVPNYNPATVYGAWPNTA
HHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEECCCCCC
YPPVYLPPPPGQQFADSFVKGFGYSLGVATTYALFSSIDWDDDDHHHHDDDHHDDDYHHG
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GNGYQHNGDNININVNNFNRISGQNLPGQTMGWQHNPAWRNGVPYPNNTVAQRFHPTNVS
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
GGLSATQQAPVSRDSQRQAAMTQFQQRTHTANASLPAPGTRDAQRKAASQQLNQIAQRNN
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
YRGYDGTQNSSRREAAQQTLNKSTTQQHRSELKAKAQQHPVSQQQRDTARQRIESSTPQQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHH
RQAFRQNMHANVFSGNDSRSPSWQSQQLRGLESRRGSHLNTEQRAAAREHFSEHHEFHRR
HHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]