| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16763546
Identifier: 16763546
GI number: 16763546
Start: 183042
End: 183833
Strand: Reverse
Name: 16763546
Synonym: STM0156
Alternate gene names: NA
Gene position: 183833-183042 (Counterclockwise)
Preceding gene: 16763547
Following gene: 16763540
Centisome position: 3.78
GC content: 56.69
Gene sequence:
>792_bases ATGAAAAAGGTTATGTTAAGCGCTCTGTTACTGTCGTTACCCTTGCTGGGCTACGCGCAGGAACGGTTCCCCTCCCCGGA AGCGGCCGCCAGCGCCTTCGCCGCGGCGGTAGCCGGAAAAAACGAAACGCAGCTTACCGCGCTACTGGGCGATGACTGGC GGCAATTTCTGCCGCCGGAAGGTGCCGATCCCGAGGCCGTGGCCCGCTTCAATCGTGACTGGCGCGAAGGCCATCGCATT GTACAAAAAGACAATACGGCGCACCTGAATGTCGGACGAGAAGACTGGCAGCTCCCGGTGCCCATGGTGAAAGAGACTGG CGGCTGGCGCTTTGATATGGCGGCAGCCGGGAATGAGATCCTCACCCGTACTATTGGGCGAAATGAACTTTCTACCTTAC AGGCCATGCATGCTTACGTTGATGCGCAGCAGGATTATTACTTACAAAACCATCGCTGGGCGCACAGGATAATCAGTAGC GAAGGCCAAAAAGATGGCCTGTACTGGCCAACCAAAGCAGGCGACGTCCCCAGTCCGTTAGGCCCAAACTTTAGTCCCGC AGCGCCAGACGAGGGTTACCACGGCTACCATTTCCGTATTATCAGCGATAACGACGGTCACGGCGCGGCGCTTCTGGCCT GGCCGATGCATTACGGCGAAACCGGGGTGATGAGTTTTATGGTCAACCAGGACGATCGTATTTATCAGGCGGATTTAGGC AAGGAGACGGAGAGTAAAGTTCAGGCTATCACGCGTTTTGCGCCAGACGCACAGTGGCAGGTCGCCGAATAA
Upstream 100 bases:
>100_bases AAGCCGTCGCGGCAGTCACTTAAACACCGAGCAACGCGCCGCCGCGCGGGAACATTTTTCTGAACATCATGAATTTCATC GCCGTTAACCGGAGCAGATA
Downstream 100 bases:
>100_bases CCCGTAAGCGCCTGGCGTTATCGCCAGGCCATGATCATTAGCCCTGATGCGGCATTAATTCCGGATGGCCTTGTACCGGC GGCTTGTTGCTGGTCAGCGC
Product: periplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKKVMLSALLLSLPLLGYAQERFPSPEAAASAFAAAVAGKNETQLTALLGDDWRQFLPPEGADPEAVARFNRDWREGHRI VQKDNTAHLNVGREDWQLPVPMVKETGGWRFDMAAAGNEILTRTIGRNELSTLQAMHAYVDAQQDYYLQNHRWAHRIISS EGQKDGLYWPTKAGDVPSPLGPNFSPAAPDEGYHGYHFRIISDNDGHGAALLAWPMHYGETGVMSFMVNQDDRIYQADLG KETESKVQAITRFAPDAQWQVAE
Sequences:
>Translated_263_residues MKKVMLSALLLSLPLLGYAQERFPSPEAAASAFAAAVAGKNETQLTALLGDDWRQFLPPEGADPEAVARFNRDWREGHRI VQKDNTAHLNVGREDWQLPVPMVKETGGWRFDMAAAGNEILTRTIGRNELSTLQAMHAYVDAQQDYYLQNHRWAHRIISS EGQKDGLYWPTKAGDVPSPLGPNFSPAAPDEGYHGYHFRIISDNDGHGAALLAWPMHYGETGVMSFMVNQDDRIYQADLG KETESKVQAITRFAPDAQWQVAE >Mature_263_residues MKKVMLSALLLSLPLLGYAQERFPSPEAAASAFAAAVAGKNETQLTALLGDDWRQFLPPEGADPEAVARFNRDWREGHRI VQKDNTAHLNVGREDWQLPVPMVKETGGWRFDMAAAGNEILTRTIGRNELSTLQAMHAYVDAQQDYYLQNHRWAHRIISS EGQKDGLYWPTKAGDVPSPLGPNFSPAAPDEGYHGYHFRIISDNDGHGAALLAWPMHYGETGVMSFMVNQDDRIYQADLG KETESKVQAITRFAPDAQWQVAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29333; Mature: 29333
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVMLSALLLSLPLLGYAQERFPSPEAAASAFAAAVAGKNETQLTALLGDDWRQFLPPE CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHCCCC GADPEAVARFNRDWREGHRIVQKDNTAHLNVGREDWQLPVPMVKETGGWRFDMAAAGNEI CCCHHHHHHHCCCHHHCCCEEECCCCEEEECCCCCCCCCCCHHHCCCCEEEEHHHCCCHH LTRTIGRNELSTLQAMHAYVDAQQDYYLQNHRWAHRIISSEGQKDGLYWPTKAGDVPSPL HHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GPNFSPAAPDEGYHGYHFRIISDNDGHGAALLAWPMHYGETGVMSFMVNQDDRIYQADLG CCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEECCCC KETESKVQAITRFAPDAQWQVAE CCHHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure MKKVMLSALLLSLPLLGYAQERFPSPEAAASAFAAAVAGKNETQLTALLGDDWRQFLPPE CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHCCCC GADPEAVARFNRDWREGHRIVQKDNTAHLNVGREDWQLPVPMVKETGGWRFDMAAAGNEI CCCHHHHHHHCCCHHHCCCEEECCCCEEEECCCCCCCCCCCHHHCCCCEEEEHHHCCCHH LTRTIGRNELSTLQAMHAYVDAQQDYYLQNHRWAHRIISSEGQKDGLYWPTKAGDVPSPL HHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GPNFSPAAPDEGYHGYHFRIISDNDGHGAALLAWPMHYGETGVMSFMVNQDDRIYQADLG CCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEECCCC KETESKVQAITRFAPDAQWQVAE CCHHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA