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The map label for this gene is xylP [H]

Identifier: 16763432

GI number: 16763432

Start: 50451

End: 51824

Strand: Reverse

Name: xylP [H]

Synonym: STM0042

Alternate gene names: 16763432

Gene position: 51824-50451 (Counterclockwise)

Preceding gene: 16763433

Following gene: 16763431

Centisome position: 1.07

GC content: 49.05

Gene sequence:

>1374_bases
ATGAGTTCTGTCATTGAGGATACCCAGCCTTCCGGGTCAGCATCATTGTCTTTACTACAGCGTATTAGCTACGGCTCTTT
GGATGTGGCGGGTAATCTGCTGTACTGCTTCAGTTCAACGTACATTTTATATTTCTACACAGACGTTGCGGGCATTAGCC
TTGCCGTAGCAGGCGTTATCCTGCTGCTGGCGCGTATTATCGATGGCATAGACGCCCCCATATGGGGGATCATCATCGAT
AAAACACGTTCACGCTACGGTAAATGTCGTCCCTGGTTTTTATGGTTACCGCTGCCTTTTGCGGTATTCAGCGCGCTGTC
ATTTTGGTCTCCTGATATCAGTATGACAGGAAAAGCCATCTATGCAGCAATATCTTATATGATTGCCAGCATTCTATTTA
CCGGACTTAATACACCACTCAGTGCAATATTACCCCTGATGACCTTATCTCCCAAAGAAAGACTGGTTTTAAATTCCTGG
CGAATGACCGGTGGGCAAATTGGGGTTTTATTAATGAACGCGACCGCCTTGCCGTTAGTCGCTTTTTTAGGTAACGGTGA
TGATCACGCTGGTTTTATTTATACGGCAATTACGTTTGCCATTATATCCTGCGCGCTAACGCTCTTTGCGTTTAAAAACA
TTCGTGAAATGGATACGGATAAAATACAGCATGAACCTAAGTTGCCGATGAAAAAAAGTTTCGCGGCGATGAAAGGTAAC
TGGCCGTGGATCCTGATGGTGCTGGCTAATCTGATCTTCTGGATTGCCCTACAGCAGCGCAACACGACCATTGTCTATTA
TCTGACCTACAACCTCGACCGTAAAGATCTGGTACCGCTGATTAACAGCCTGGCGACGATTCAGATCCTGTTTATCATCG
CTATCCCCTTCTTTAGCAAATACCTGGCTAAAACCTGGATATGGGTAGGCGGTCTGCTGGTCGCCACGTTTGGCGGCGTC
ATGATGTGGCTGGCAGCGGACAACATTACTTTCCTCATCGCCGCCTGGATACTCGGCAATATCGGCAGCGGTATCGCCTG
CTCAATGCCATTTGCCATGCTGGGCTTCGCCGTTGATTTTGGCGCCTGGAAGACCGGTATTAAGGCTACCGGCATTCTTA
TCGCCTTCGGCAGTACCTTCTGCATCAAGATGGGTAGTGGCCTCGGCACCGCTTTCGCCGCCTGGATCATGAACAGTTTT
GGCTATGTCCCCAACCATGCCCAGAGTGCTGCGGGTCTGGAGGGCATTATCTGGGCCTTTATCTGGGCACCCGCCCTACT
CTTCGCGCTCGCAGCGATCCCACTACTTTTCTTTCGCAAATACGAAGCGATGGAAGAGAAGATTCGCCACGATCTGGAAA
CCGTCAACTCATAA

Upstream 100 bases:

>100_bases
AGGTTAAATTCAGAAACGACATAAAAATAATATTCAAAACTTGCTTAGAAAGTAGAGGTTGTTTTTCTGGGCGTATCGTA
CCAATATCGGAGTTATCATT

Downstream 100 bases:

>100_bases
CGTTCTTTACCTTCACCCTCGAATATGGGAGGCACCACCATGCCATTTATGCAACAAGACCCGCGTCGTCTGGTCTGGCA
GCAAAACGATCGCTATTTAT

Product: sodium galactoside symporter

Products: NA

Alternate protein names: Xylose transporter [H]

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MSSVIEDTQPSGSASLSLLQRISYGSLDVAGNLLYCFSSTYILYFYTDVAGISLAVAGVILLLARIIDGIDAPIWGIIID
KTRSRYGKCRPWFLWLPLPFAVFSALSFWSPDISMTGKAIYAAISYMIASILFTGLNTPLSAILPLMTLSPKERLVLNSW
RMTGGQIGVLLMNATALPLVAFLGNGDDHAGFIYTAITFAIISCALTLFAFKNIREMDTDKIQHEPKLPMKKSFAAMKGN
WPWILMVLANLIFWIALQQRNTTIVYYLTYNLDRKDLVPLINSLATIQILFIIAIPFFSKYLAKTWIWVGGLLVATFGGV
MMWLAADNITFLIAAWILGNIGSGIACSMPFAMLGFAVDFGAWKTGIKATGILIAFGSTFCIKMGSGLGTAFAAWIMNSF
GYVPNHAQSAAGLEGIIWAFIWAPALLFALAAIPLLFFRKYEAMEEKIRHDLETVNS

Sequences:

>Translated_457_residues
MSSVIEDTQPSGSASLSLLQRISYGSLDVAGNLLYCFSSTYILYFYTDVAGISLAVAGVILLLARIIDGIDAPIWGIIID
KTRSRYGKCRPWFLWLPLPFAVFSALSFWSPDISMTGKAIYAAISYMIASILFTGLNTPLSAILPLMTLSPKERLVLNSW
RMTGGQIGVLLMNATALPLVAFLGNGDDHAGFIYTAITFAIISCALTLFAFKNIREMDTDKIQHEPKLPMKKSFAAMKGN
WPWILMVLANLIFWIALQQRNTTIVYYLTYNLDRKDLVPLINSLATIQILFIIAIPFFSKYLAKTWIWVGGLLVATFGGV
MMWLAADNITFLIAAWILGNIGSGIACSMPFAMLGFAVDFGAWKTGIKATGILIAFGSTFCIKMGSGLGTAFAAWIMNSF
GYVPNHAQSAAGLEGIIWAFIWAPALLFALAAIPLLFFRKYEAMEEKIRHDLETVNS
>Mature_456_residues
SSVIEDTQPSGSASLSLLQRISYGSLDVAGNLLYCFSSTYILYFYTDVAGISLAVAGVILLLARIIDGIDAPIWGIIIDK
TRSRYGKCRPWFLWLPLPFAVFSALSFWSPDISMTGKAIYAAISYMIASILFTGLNTPLSAILPLMTLSPKERLVLNSWR
MTGGQIGVLLMNATALPLVAFLGNGDDHAGFIYTAITFAIISCALTLFAFKNIREMDTDKIQHEPKLPMKKSFAAMKGNW
PWILMVLANLIFWIALQQRNTTIVYYLTYNLDRKDLVPLINSLATIQILFIIAIPFFSKYLAKTWIWVGGLLVATFGGVM
MWLAADNITFLIAAWILGNIGSGIACSMPFAMLGFAVDFGAWKTGIKATGILIAFGSTFCIKMGSGLGTAFAAWIMNSFG
YVPNHAQSAAGLEGIIWAFIWAPALLFALAAIPLLFFRKYEAMEEKIRHDLETVNS

Specific function: Responsible for transport of xylose into the cell, with the concomitant uptake of protons (symport system) [H]

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI145693206, Length=455, Percent_Identity=26.5934065934066, Blast_Score=182, Evalue=5e-47,
Organism=Escherichia coli, GI1786466, Length=444, Percent_Identity=27.9279279279279, Blast_Score=181, Evalue=8e-47,
Organism=Escherichia coli, GI48994989, Length=458, Percent_Identity=27.7292576419214, Blast_Score=175, Evalue=6e-45,
Organism=Escherichia coli, GI87082306, Length=448, Percent_Identity=29.0178571428571, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI1790561, Length=442, Percent_Identity=27.6018099547511, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1787902, Length=450, Percent_Identity=24.4444444444444, Blast_Score=121, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 50221; Mature: 50090

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVIEDTQPSGSASLSLLQRISYGSLDVAGNLLYCFSSTYILYFYTDVAGISLAVAGVI
CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCEEEEECCCEEEEEEEHHHHHHHHHHHHH
LLLARIIDGIDAPIWGIIIDKTRSRYGKCRPWFLWLPLPFAVFSALSFWSPDISMTGKAI
HHHHHHHCCCCCCEEEEEEECHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCHHHH
YAAISYMIASILFTGLNTPLSAILPLMTLSPKERLVLNSWRMTGGQIGVLLMNATALPLV
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHH
AFLGNGDDHAGFIYTAITFAIISCALTLFAFKNIREMDTDKIQHEPKLPMKKSFAAMKGN
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCC
WPWILMVLANLIFWIALQQRNTTIVYYLTYNLDRKDLVPLINSLATIQILFIIAIPFFSK
CCHHHHHHHHHHHHHHEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLAKTWIWVGGLLVATFGGVMMWLAADNITFLIAAWILGNIGSGIACSMPFAMLGFAVDF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHH
GAWKTGIKATGILIAFGSTFCIKMGSGLGTAFAAWIMNSFGYVPNHAQSAAGLEGIIWAF
HHHHCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHH
IWAPALLFALAAIPLLFFRKYEAMEEKIRHDLETVNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSVIEDTQPSGSASLSLLQRISYGSLDVAGNLLYCFSSTYILYFYTDVAGISLAVAGVI
CCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCEEEEECCCEEEEEEEHHHHHHHHHHHHH
LLLARIIDGIDAPIWGIIIDKTRSRYGKCRPWFLWLPLPFAVFSALSFWSPDISMTGKAI
HHHHHHHCCCCCCEEEEEEECHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCHHHH
YAAISYMIASILFTGLNTPLSAILPLMTLSPKERLVLNSWRMTGGQIGVLLMNATALPLV
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHH
AFLGNGDDHAGFIYTAITFAIISCALTLFAFKNIREMDTDKIQHEPKLPMKKSFAAMKGN
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCC
WPWILMVLANLIFWIALQQRNTTIVYYLTYNLDRKDLVPLINSLATIQILFIIAIPFFSK
CCHHHHHHHHHHHHHHEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLAKTWIWVGGLLVATFGGVMMWLAADNITFLIAAWILGNIGSGIACSMPFAMLGFAVDF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHH
GAWKTGIKATGILIAFGSTFCIKMGSGLGTAFAAWIMNSFGYVPNHAQSAAGLEGIIWAF
HHHHCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHH
IWAPALLFALAAIPLLFFRKYEAMEEKIRHDLETVNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9573180 [H]