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The map label for this gene is yicI [C]

Identifier: 16763431

GI number: 16763431

Start: 48372

End: 50411

Strand: Reverse

Name: yicI [C]

Synonym: STM0041

Alternate gene names: 16763431

Gene position: 50411-48372 (Counterclockwise)

Preceding gene: 16763432

Following gene: 16763424

Centisome position: 1.04

GC content: 54.61

Gene sequence:

>2040_bases
ATGCCATTTATGCAACAAGACCCGCGTCGTCTGGTCTGGCAGCAAAACGATCGCTATTTATGGATTGAACCCTGGGGCGA
GAACAGCCTGCGCGTACGCAGCGGCCGTCATCTGCCGGTAATGAGAAATGAAGACTGGGCATTGACTGAGCCAGTCGCAG
AAAGTCAGTGCCACATTGATTATGAGCACCACCAGGCAACGCTGACCAACGGCAAAATTATCGCTATCGTCAATCAAAAA
GGACAGGTTACCTTTTACCGCCATCCACACAAACCCCTGTTGCAGGAGTTCTGGCGCCTGCGGGGCGAAATTGGCGAGGA
TGAATCATCTCACGGCCAGTACGTCAGCGCACTCAACCTTGAGGGACGCGAGTTCCGCCCTATTCAGGGTGGGAAATATT
CACTGAAAGCCCGCTTCGAAGCCACCGAAGGGGAAAAAATTTATGGCATGGGGCAGTATCAACAGGCCAACCTGGATCTC
AAAGGATGCGTGCTTGAGCTGGCGCAACGTAACTCCCAGGCCTCAGTACCGTTTATGCTCTCCAGTCTGGGCTACGGATT
TTTATGGAACAACCCGGCAGTCGGACGCGTAACCTTTGCCCAAAACGTTACCGAATGGGAAGCGCAGGTCAGCGAACAGC
TGGACTACTGGATCACGGCTGGCGATACCCCGGCAGAAATTAGCCGGGCTTACGCGCTGGCTACCGGCACACCGCCGATG
ATGCCGGACTACGCCATGGGCTTCTGGCAGTGCAAACTCCGTTATCGTACGCAGGAAGAGCTGCTGGAGGTCGCCCGCGA
ATATAAGCGCCGCAATCTGCCTATCTCAGTGATCGTAATCGACTTCTTTCACTGGCCGAATCAGGGTGACTGGATGTTCG
ATGCGCGCGACTGGCCCGATCCTGATGCCATGATTGCCGAGCTGAAATCGCTGGGAATTGAGCTGATGGTCTCCGTCTGG
CCGACGGTGGATAACCGTACCGAAAGCTATCGGGAGATGCGCGAAAACGGCTGGCTGGTACAAACGGAACGTGGCTTGCC
GATCAATATGGATTTCCTCGGCAATACCACTTACTTTGATGCGACTCATCCGGGCGCGCGCGACTACGTCTGGGGCAAAG
CCAAACGCAACTATTACGATAAAGGCGTGAAGTTATTCTGGTTAGATGAAGCCGAACCTGAGTTCAGCGTTTACGACTAC
GACAACTATCGCTACCATGCCGGGCCGGTACTGGAAGTGGGCAATATCTACCCACGTATGTACGCTAAAACCTTTTTTGA
CGGCATGAAAGCCGATGGCGAAGACCAGGTTATCAACCTGCTACGCTGCGCCTGGGCCGGCAGTCAGAAGTACGGCGCTC
TGGTCTGGTCAGGGGATATTCACTCCTCGTTTAGATCGCTGCGCAACCAGTTTGCTGCCGGACTCAATATGGGAATCGCG
GGGATACCGTGGTGGACGACGGATATCGGCGGTTTTCATGGTGGCAATATTCACGACCCGAAATTCCATGAATTGCTGAT
TCGCTGGTTCCAGTGGGGCGTCTTTAGCCCGGTGATGCGTCTGCACGGCAACCGCGATCCGCAGATTTTACCCGCACAAC
CGTATCGGGATGGTATCGCCCAGTGCCCTACAGGTGCGCCGAACGAGGTCTGGAGCTACGGTGAGGAAGTATGCGAGGTA
CTGACAGGTTGCCTGGCGTTGCGAGAAAAACTCAAGCCCTATATCAAAGCGCTGATGGAGGAAACCCATAAGCACAATAC
GCCAGTGATGCGCCCCCTGTTCTTTGAATTCCCCGAACAGGAAACAAGTTGGACAATCACCGACCAGTATTGTTTTGGTC
CTGACCTGCTGATCGCCCCCGTCATGCATGAAGGTATGCGCGAACGTGATGTCTGGCTACCAGAAGGGGAAACATGGACG
GATCTTGCGACCGGTGAAAGCTATTCAGGAGGGCAGACGCTGCAGTACGCTACGCCACTGAACAGAATTCCGGTGTTTAT
CCGCGAAGGTGGGCAGTACCGTAGCCTGCTGAACTTGTAG

Upstream 100 bases:

>100_bases
TCGCAAATACGAAGCGATGGAAGAGAAGATTCGCCACGATCTGGAAACCGTCAACTCATAACGTTCTTTACCTTCACCCT
CGAATATGGGAGGCACCACC

Downstream 100 bases:

>100_bases
AATGATTCCGGCTGCGGGTTAATACCGCAGCCGGAAGTATTACGGTAGGTACGTCTACTGTAGTTTAAACAATGCCGAGT
AGTCCGCATTGCAAATACGC

Product: glycosyl hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 679; Mature: 678

Protein sequence:

>679_residues
MPFMQQDPRRLVWQQNDRYLWIEPWGENSLRVRSGRHLPVMRNEDWALTEPVAESQCHIDYEHHQATLTNGKIIAIVNQK
GQVTFYRHPHKPLLQEFWRLRGEIGEDESSHGQYVSALNLEGREFRPIQGGKYSLKARFEATEGEKIYGMGQYQQANLDL
KGCVLELAQRNSQASVPFMLSSLGYGFLWNNPAVGRVTFAQNVTEWEAQVSEQLDYWITAGDTPAEISRAYALATGTPPM
MPDYAMGFWQCKLRYRTQEELLEVAREYKRRNLPISVIVIDFFHWPNQGDWMFDARDWPDPDAMIAELKSLGIELMVSVW
PTVDNRTESYREMRENGWLVQTERGLPINMDFLGNTTYFDATHPGARDYVWGKAKRNYYDKGVKLFWLDEAEPEFSVYDY
DNYRYHAGPVLEVGNIYPRMYAKTFFDGMKADGEDQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIA
GIPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQILPAQPYRDGIAQCPTGAPNEVWSYGEEVCEV
LTGCLALREKLKPYIKALMEETHKHNTPVMRPLFFEFPEQETSWTITDQYCFGPDLLIAPVMHEGMRERDVWLPEGETWT
DLATGESYSGGQTLQYATPLNRIPVFIREGGQYRSLLNL

Sequences:

>Translated_679_residues
MPFMQQDPRRLVWQQNDRYLWIEPWGENSLRVRSGRHLPVMRNEDWALTEPVAESQCHIDYEHHQATLTNGKIIAIVNQK
GQVTFYRHPHKPLLQEFWRLRGEIGEDESSHGQYVSALNLEGREFRPIQGGKYSLKARFEATEGEKIYGMGQYQQANLDL
KGCVLELAQRNSQASVPFMLSSLGYGFLWNNPAVGRVTFAQNVTEWEAQVSEQLDYWITAGDTPAEISRAYALATGTPPM
MPDYAMGFWQCKLRYRTQEELLEVAREYKRRNLPISVIVIDFFHWPNQGDWMFDARDWPDPDAMIAELKSLGIELMVSVW
PTVDNRTESYREMRENGWLVQTERGLPINMDFLGNTTYFDATHPGARDYVWGKAKRNYYDKGVKLFWLDEAEPEFSVYDY
DNYRYHAGPVLEVGNIYPRMYAKTFFDGMKADGEDQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIA
GIPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQILPAQPYRDGIAQCPTGAPNEVWSYGEEVCEV
LTGCLALREKLKPYIKALMEETHKHNTPVMRPLFFEFPEQETSWTITDQYCFGPDLLIAPVMHEGMRERDVWLPEGETWT
DLATGESYSGGQTLQYATPLNRIPVFIREGGQYRSLLNL
>Mature_678_residues
PFMQQDPRRLVWQQNDRYLWIEPWGENSLRVRSGRHLPVMRNEDWALTEPVAESQCHIDYEHHQATLTNGKIIAIVNQKG
QVTFYRHPHKPLLQEFWRLRGEIGEDESSHGQYVSALNLEGREFRPIQGGKYSLKARFEATEGEKIYGMGQYQQANLDLK
GCVLELAQRNSQASVPFMLSSLGYGFLWNNPAVGRVTFAQNVTEWEAQVSEQLDYWITAGDTPAEISRAYALATGTPPMM
PDYAMGFWQCKLRYRTQEELLEVAREYKRRNLPISVIVIDFFHWPNQGDWMFDARDWPDPDAMIAELKSLGIELMVSVWP
TVDNRTESYREMRENGWLVQTERGLPINMDFLGNTTYFDATHPGARDYVWGKAKRNYYDKGVKLFWLDEAEPEFSVYDYD
NYRYHAGPVLEVGNIYPRMYAKTFFDGMKADGEDQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIAG
IPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQILPAQPYRDGIAQCPTGAPNEVWSYGEEVCEVL
TGCLALREKLKPYIKALMEETHKHNTPVMRPLFFEFPEQETSWTITDQYCFGPDLLIAPVMHEGMRERDVWLPEGETWTD
LATGESYSGGQTLQYATPLNRIPVFIREGGQYRSLLNL

Specific function: Unknown

COG id: COG1501

COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 31 family [H]

Homologues:

Organism=Homo sapiens, GI38202257, Length=587, Percent_Identity=29.1311754684838, Blast_Score=190, Evalue=4e-48,
Organism=Homo sapiens, GI88900491, Length=587, Percent_Identity=29.1311754684838, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI66346737, Length=689, Percent_Identity=26.5602322206096, Blast_Score=182, Evalue=8e-46,
Organism=Homo sapiens, GI119393895, Length=538, Percent_Identity=26.3940520446097, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI119393893, Length=538, Percent_Identity=26.3940520446097, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI119393891, Length=538, Percent_Identity=26.3940520446097, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI221316699, Length=534, Percent_Identity=25.4681647940075, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI153791946, Length=402, Percent_Identity=27.1144278606965, Blast_Score=109, Evalue=7e-24,
Organism=Homo sapiens, GI310115361, Length=259, Percent_Identity=23.9382239382239, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI157364974, Length=260, Percent_Identity=24.6153846153846, Blast_Score=81, Evalue=3e-15,
Organism=Escherichia coli, GI2367256, Length=666, Percent_Identity=24.3243243243243, Blast_Score=173, Evalue=3e-44,
Organism=Escherichia coli, GI2367323, Length=400, Percent_Identity=28, Blast_Score=134, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI71991189, Length=475, Percent_Identity=28.8421052631579, Blast_Score=188, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17560798, Length=654, Percent_Identity=25.0764525993884, Blast_Score=166, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI17560800, Length=654, Percent_Identity=25.0764525993884, Blast_Score=166, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI71985706, Length=237, Percent_Identity=27.8481012658228, Blast_Score=91, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI32563849, Length=260, Percent_Identity=24.2307692307692, Blast_Score=80, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6319706, Length=561, Percent_Identity=25.3119429590018, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24643749, Length=481, Percent_Identity=25.5717255717256, Blast_Score=142, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24643753, Length=481, Percent_Identity=25.5717255717256, Blast_Score=142, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24643751, Length=481, Percent_Identity=25.5717255717256, Blast_Score=142, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24643746, Length=481, Percent_Identity=25.5717255717256, Blast_Score=142, Evalue=8e-34,
Organism=Drosophila melanogaster, GI21357605, Length=481, Percent_Identity=25.5717255717256, Blast_Score=142, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24650054, Length=393, Percent_Identity=25.4452926208651, Blast_Score=106, Evalue=6e-23,
Organism=Drosophila melanogaster, GI28571438, Length=416, Percent_Identity=23.3173076923077, Blast_Score=94, Evalue=4e-19,
Organism=Drosophila melanogaster, GI28571440, Length=416, Percent_Identity=23.3173076923077, Blast_Score=93, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011013
- InterPro:   IPR000322
- InterPro:   IPR017853 [H]

Pfam domain/function: PF01055 Glyco_hydro_31 [H]

EC number: NA

Molecular weight: Translated: 78432; Mature: 78301

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFMQQDPRRLVWQQNDRYLWIEPWGENSLRVRSGRHLPVMRNEDWALTEPVAESQCHID
CCCCCCCCHHHHEECCCCEEEEEECCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCEEE
YEHHQATLTNGKIIAIVNQKGQVTFYRHPHKPLLQEFWRLRGEIGEDESSHGQYVSALNL
EHHCEEEECCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECC
EGREFRPIQGGKYSLKARFEATEGEKIYGMGQYQQANLDLKGCVLELAQRNSQASVPFML
CCCEECCCCCCCEEEEEEEECCCCCEEEECCCCEECCCCHHHHHHHHHHCCCCCCCCHHH
SSLGYGFLWNNPAVGRVTFAQNVTEWEAQVSEQLDYWITAGDTPAEISRAYALATGTPPM
HHCCCCEEECCCCCCEEEHHCCHHHHHHHHHHCCCEEEECCCCHHHHHHEEEEECCCCCC
MPDYAMGFWQCKLRYRTQEELLEVAREYKRRNLPISVIVIDFFHWPNQGDWMFDARDWPD
CCHHHCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEEECCCCCCC
PDAMIAELKSLGIELMVSVWPTVDNRTESYREMRENGWLVQTERGLPINMDFLGNTTYFD
HHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCEEEEEECCCCEEEE
ATHPGARDYVWGKAKRNYYDKGVKLFWLDEAEPEFSVYDYDNYRYHAGPVLEVGNIYPRM
CCCCCCCCCCCCCHHCCHHHCCCEEEEECCCCCCEEEEECCCEEECCCCEEECCCCCHHH
YAKTFFDGMKADGEDQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIA
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC
GIPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQILPAQPYRDGIA
CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHH
QCPTGAPNEVWSYGEEVCEVLTGCLALREKLKPYIKALMEETHKHNTPVMRPLFFEFPEQ
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC
ETSWTITDQYCFGPDLLIAPVMHEGMRERDVWLPEGETWTDLATGESYSGGQTLQYATPL
CCCEEEEECEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
NRIPVFIREGGQYRSLLNL
CCCCEEEECCCCHHHHHCC
>Mature Secondary Structure 
PFMQQDPRRLVWQQNDRYLWIEPWGENSLRVRSGRHLPVMRNEDWALTEPVAESQCHID
CCCCCCCHHHHEECCCCEEEEEECCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCEEE
YEHHQATLTNGKIIAIVNQKGQVTFYRHPHKPLLQEFWRLRGEIGEDESSHGQYVSALNL
EHHCEEEECCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECC
EGREFRPIQGGKYSLKARFEATEGEKIYGMGQYQQANLDLKGCVLELAQRNSQASVPFML
CCCEECCCCCCCEEEEEEEECCCCCEEEECCCCEECCCCHHHHHHHHHHCCCCCCCCHHH
SSLGYGFLWNNPAVGRVTFAQNVTEWEAQVSEQLDYWITAGDTPAEISRAYALATGTPPM
HHCCCCEEECCCCCCEEEHHCCHHHHHHHHHHCCCEEEECCCCHHHHHHEEEEECCCCCC
MPDYAMGFWQCKLRYRTQEELLEVAREYKRRNLPISVIVIDFFHWPNQGDWMFDARDWPD
CCHHHCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEEECCCCCCC
PDAMIAELKSLGIELMVSVWPTVDNRTESYREMRENGWLVQTERGLPINMDFLGNTTYFD
HHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCEEEEEECCCCEEEE
ATHPGARDYVWGKAKRNYYDKGVKLFWLDEAEPEFSVYDYDNYRYHAGPVLEVGNIYPRM
CCCCCCCCCCCCCHHCCHHHCCCEEEEECCCCCCEEEEECCCEEECCCCEEECCCCCHHH
YAKTFFDGMKADGEDQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIA
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC
GIPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQILPAQPYRDGIA
CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHH
QCPTGAPNEVWSYGEEVCEVLTGCLALREKLKPYIKALMEETHKHNTPVMRPLFFEFPEQ
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC
ETSWTITDQYCFGPDLLIAPVMHEGMRERDVWLPEGETWTDLATGESYSGGQTLQYATPL
CCCEEEEECEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
NRIPVFIREGGQYRSLLNL
CCCCEEEECCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7808389 [H]