Click here to switch to the map view.

The map label for this gene is cbiM

Identifier: 161353594

GI number: 161353594

Start: 2102970

End: 2103617

Strand: Reverse

Name: cbiM

Synonym: STM2023

Alternate gene names: 161353594

Gene position: 2103617-2102970 (Counterclockwise)

Preceding gene: 16765354

Following gene: 16765352

Centisome position: 43.31

GC content: 54.78

Gene sequence:

>648_bases
ATGCATATCATGGAGGGCTTTTTACCGCCAGTGTGGGCGCTGGCCTGGTGGCTACTGTTTTTACCCTGCTTGTGGTATGG
ACTGGTGCGCTTACGGCGTATTGTGCAGGAGGATAATCATCAGAAGGTACTGCTGGCGCTGTGCGGCGCGTTTATTTTTG
TCCTGTCCGCGCTCAAAATTCCGTCGGTAACGGGGAGTTGTTCACATCCGACCGGCGTTGGTCTGGCGGTTATCTTGTTC
GGGCCCGGGGTGGTGGCGATTCTCGGCGCGGTTGTGCTGTTGTTTCAGGCGCTATTGCTGGCGCACGGTGGCCTGACGAC
GCTTGGCGCAAATGGAATGTCGATGGCGGTGATTGGCCCGGTTGTCGGTTATCTGGTGTGGAAAATGGCCTGCCGTGCCG
GACTGCGCCGTGATGTCGCCGTTTTTCTGTGCGCGATGCTGGCGGATTTGGCGACCTATTTTGTGACTTCAGTCCAGCTT
GGCGTTGCGTTTCCCGATCCCCATGCCGGAGCGACAGGGTCTGTTGTGAAGTTTATGGGGATTTTCTGCCTCACACAGAT
TCCTGTCGCCATTGCTGAAGGTTTATTAACCGTCATGATTTATGACCAGTTAACCAAACGGCAAGTGATTACCGTACAAG
GACATTAA

Upstream 100 bases:

>100_bases
AGTATGCAGAATGAAACTTGAACAGCAGCTTCGACAGTTGTCTTTCAGTGGACTGGCTGCAGCGCTATTGCTGATGGTTG
TCCCGCAACAGGCGTTTGCG

Downstream 100 bases:

>100_bases
AATGAAAAAAACGTTGATGTTGTTAGCGATGGTGGTGGCGCTGGTGATTCTGCCGTTTTTTATTAACCATGGCGGTGAAT
ATGGCGGTTCAGACGGCGAA

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MHIMEGFLPPVWALAWWLLFLPCLWYGLVRLRRIVQEDNHQKVLLALCGAFIFVLSALKIPSVTGSCSHPTGVGLAVILF
GPGVVAILGAVVLLFQALLLAHGGLTTLGANGMSMAVIGPVVGYLVWKMACRAGLRRDVAVFLCAMLADLATYFVTSVQL
GVAFPDPHAGATGSVVKFMGIFCLTQIPVAIAEGLLTVMIYDQLTKRQVITVQGH

Sequences:

>Translated_215_residues
MHIMEGFLPPVWALAWWLLFLPCLWYGLVRLRRIVQEDNHQKVLLALCGAFIFVLSALKIPSVTGSCSHPTGVGLAVILF
GPGVVAILGAVVLLFQALLLAHGGLTTLGANGMSMAVIGPVVGYLVWKMACRAGLRRDVAVFLCAMLADLATYFVTSVQL
GVAFPDPHAGATGSVVKFMGIFCLTQIPVAIAEGLLTVMIYDQLTKRQVITVQGH
>Mature_215_residues
MHIMEGFLPPVWALAWWLLFLPCLWYGLVRLRRIVQEDNHQKVLLALCGAFIFVLSALKIPSVTGSCSHPTGVGLAVILF
GPGVVAILGAVVLLFQALLLAHGGLTTLGANGMSMAVIGPVVGYLVWKMACRAGLRRDVAVFLCAMLADLATYFVTSVQL
GVAFPDPHAGATGSVVKFMGIFCLTQIPVAIAEGLLTVMIYDQLTKRQVITVQGH

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CBIM_SALTY (Q05594)

Other databases:

- EMBL:   L12006
- EMBL:   AE006468
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM2023
- HOGENOM:   HBG662717
- OMA:   ANVFSMG
- ProtClustDB:   PRK08319
- BioCyc:   STYP99287:STM2023-MONOMER
- InterPro:   IPR002751
- InterPro:   IPR018024
- TIGRFAMs:   TIGR00123

Pfam domain/function: PF01891 CbiM

EC number: NA

Molecular weight: Translated: 23014; Mature: 23014

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xfabf24c)-; HASH(0xf607d60)-; HASH(0xb7fef50)-; HASH(0xf84a0c8)-; HASH(0xdf9c5f4)-; HASH(0xee12a74)-; HASH(0xebbe48c)-;

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIMEGFLPPVWALAWWLLFLPCLWYGLVRLRRIVQEDNHQKVLLALCGAFIFVLSALKI
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
PSVTGSCSHPTGVGLAVILFGPGVVAILGAVVLLFQALLLAHGGLTTLGANGMSMAVIGP
CCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHH
VVGYLVWKMACRAGLRRDVAVFLCAMLADLATYFVTSVQLGVAFPDPHAGATGSVVKFMG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
IFCLTQIPVAIAEGLLTVMIYDQLTKRQVITVQGH
HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECH
>Mature Secondary Structure
MHIMEGFLPPVWALAWWLLFLPCLWYGLVRLRRIVQEDNHQKVLLALCGAFIFVLSALKI
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
PSVTGSCSHPTGVGLAVILFGPGVVAILGAVVLLFQALLLAHGGLTTLGANGMSMAVIGP
CCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHH
VVGYLVWKMACRAGLRRDVAVFLCAMLADLATYFVTSVQLGVAFPDPHAGATGSVVKFMG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
IFCLTQIPVAIAEGLLTVMIYDQLTKRQVITVQGH
HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501034; 11677609