| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218931020
Identifier: 218931020
GI number: 218931020
Start: 4545247
End: 4546554
Strand: Reverse
Name: 218931020
Synonym: YPO4032
Alternate gene names: NA
Gene position: 4546554-4545247 (Counterclockwise)
Preceding gene: 218931021
Following gene: 218931008
Centisome position: 97.7
GC content: 31.04
Gene sequence:
>1308_bases TTGAGAAATGAAGACTTTAAATCTTTTATGGCGCAAGAATATAATGAGGCGTTTGATTCGATTGGAATGATGATTGAAAC TCCAAATGTGGGTGATCAAATAACATTGAAAGATCCACGTAGGCAAATTAACTTATCTTATTTATCAAGAAATAAAATCA CAGAGATAGCTAGAAGAAAAATAAAGTCTTACAAACTTGAGATGCTAATAACAGTCTCGGAATTTCATCAAGAATTAAGA GATTCTATATATAATCATGTGTTTATTAATGCTGGCAATTTTGATGCAAATGGTTGCACAAAGATAATTACGAAAGCAAT TAAATCATCCGAACGAAAGCGGAAAAGTGAGGATTATTATTTCCCGCTATTAGCTCATGGATTGGGGGATGAGAGGATAT CTATTGGTATAGCTGAAATTATACCAAGAAAGGACGTCATAAGCTTTGCTAGACCACACATAAATCACGAGCATATATGT AGAGTTGAGGAGTTTTGCGAATCAAATAAATATCCTTATAATCACTTTCTAAAATTTACAATTAGTAAGCGCTCAAAAGA AAGTCGGAGAAGAGTATCGGGACAAGTCGCTAATTTTATTGTTGGCATTCTTTATTTATTTAGTGAGCATTGGCGTATAT CATCTGAATTTATATCTTTATCAATAAATCCCTATCCTAATTACGATGGTTTTTTCTTCACAAAACTAGAAAAAGAAAAT ATTGGTTTTAATTTTTCTAGTAAAGGCACTATTTTATGGAGTGAAAAATTTTGGATTAAATTTAAAGAGGAGTTTAATCC TGATTTGTCGATTGTATTTGGTGAAATTATCAGTATGGCTGTAGAGCCTAGGAATAAGCCTGTTATAGTAGATAGGCTTA TTGATGCAATATATATATTCAGTAGCGCATTGCAAGATAAAGATAAAAGTTCAAAGATAATTAAATTAACAACTGCACTT GAAAGATTGGTTAGCCTTTCAAATAAAGAAAGTAATGACGTATCAATTAATTTCAGAAAACGAGTTGCTATCTTAGTTAG TATTTATCACGATGATTTTGATAAATGGAATGAAGTAGCAAAAGAAATGTATGATATTAGATCATCAATTATTCACGGGT CATGGTCATTATATAAAGACATTGAGCCATTATATGTTGATAAATATAGTGAGCTAACAAGTAAGGCTATATTAACTGCA TGTATAGGTTTTTATAAACGTGGCCTTGAAAGTGATAGTAACGATACTTTGTTAAAAGAATATTATGAGTTTCTAGAGCA GGCAGTTATGCGACCTAAAGTTGATTAA
Upstream 100 bases:
>100_bases CTCATTTTTAATTTTTTCAGGAAAAATTATGAGCGCATCTAAGCAAGATGTACAAGATTTTGAGTTTATAATTTCAGAGG CTATCAGAATTAAGGATAGT
Downstream 100 bases:
>100_bases AACCATTGCGCGCGCAATACTCCCCCGCCTACGCGCTCTGACTTTATCATGCACTTTTCATGCATGACATAGAGAGCCTA CAAGCCCTTGTGGTGCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MRNEDFKSFMAQEYNEAFDSIGMMIETPNVGDQITLKDPRRQINLSYLSRNKITEIARRKIKSYKLEMLITVSEFHQELR DSIYNHVFINAGNFDANGCTKIITKAIKSSERKRKSEDYYFPLLAHGLGDERISIGIAEIIPRKDVISFARPHINHEHIC RVEEFCESNKYPYNHFLKFTISKRSKESRRRVSGQVANFIVGILYLFSEHWRISSEFISLSINPYPNYDGFFFTKLEKEN IGFNFSSKGTILWSEKFWIKFKEEFNPDLSIVFGEIISMAVEPRNKPVIVDRLIDAIYIFSSALQDKDKSSKIIKLTTAL ERLVSLSNKESNDVSINFRKRVAILVSIYHDDFDKWNEVAKEMYDIRSSIIHGSWSLYKDIEPLYVDKYSELTSKAILTA CIGFYKRGLESDSNDTLLKEYYEFLEQAVMRPKVD
Sequences:
>Translated_435_residues MRNEDFKSFMAQEYNEAFDSIGMMIETPNVGDQITLKDPRRQINLSYLSRNKITEIARRKIKSYKLEMLITVSEFHQELR DSIYNHVFINAGNFDANGCTKIITKAIKSSERKRKSEDYYFPLLAHGLGDERISIGIAEIIPRKDVISFARPHINHEHIC RVEEFCESNKYPYNHFLKFTISKRSKESRRRVSGQVANFIVGILYLFSEHWRISSEFISLSINPYPNYDGFFFTKLEKEN IGFNFSSKGTILWSEKFWIKFKEEFNPDLSIVFGEIISMAVEPRNKPVIVDRLIDAIYIFSSALQDKDKSSKIIKLTTAL ERLVSLSNKESNDVSINFRKRVAILVSIYHDDFDKWNEVAKEMYDIRSSIIHGSWSLYKDIEPLYVDKYSELTSKAILTA CIGFYKRGLESDSNDTLLKEYYEFLEQAVMRPKVD >Mature_435_residues MRNEDFKSFMAQEYNEAFDSIGMMIETPNVGDQITLKDPRRQINLSYLSRNKITEIARRKIKSYKLEMLITVSEFHQELR DSIYNHVFINAGNFDANGCTKIITKAIKSSERKRKSEDYYFPLLAHGLGDERISIGIAEIIPRKDVISFARPHINHEHIC RVEEFCESNKYPYNHFLKFTISKRSKESRRRVSGQVANFIVGILYLFSEHWRISSEFISLSINPYPNYDGFFFTKLEKEN IGFNFSSKGTILWSEKFWIKFKEEFNPDLSIVFGEIISMAVEPRNKPVIVDRLIDAIYIFSSALQDKDKSSKIIKLTTAL ERLVSLSNKESNDVSINFRKRVAILVSIYHDDFDKWNEVAKEMYDIRSSIIHGSWSLYKDIEPLYVDKYSELTSKAILTA CIGFYKRGLESDSNDTLLKEYYEFLEQAVMRPKVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50827; Mature: 50827
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNEDFKSFMAQEYNEAFDSIGMMIETPNVGDQITLKDPRRQINLSYLSRNKITEIARRK CCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCCHHEEHHHHHHHHHHHHHHHH IKSYKLEMLITVSEFHQELRDSIYNHVFINAGNFDANGCTKIITKAIKSSERKRKSEDYY HHHHHHHHEEEHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCE FPLLAHGLGDERISIGIAEIIPRKDVISFARPHINHEHICRVEEFCESNKYPYNHFLKFT EHHHHCCCCCCHHEEHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHEEEEE ISKRSKESRRRVSGQVANFIVGILYLFSEHWRISSEFISLSINPYPNYDGFFFTKLEKEN EHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECEEEEEEECCCCCCCCEEEEEEECCC IGFNFSSKGTILWSEKFWIKFKEEFNPDLSIVFGEIISMAVEPRNKPVIVDRLIDAIYIF CCCCCCCCCEEEEECCEEEEEHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH SSALQDKDKSSKIIKLTTALERLVSLSNKESNDVSINFRKRVAILVSIYHDDFDKWNEVA HHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEHHHEEEEEHHHHCCHHHHHHHH KEMYDIRSSIIHGSWSLYKDIEPLYVDKYSELTSKAILTACIGFYKRGLESDSNDTLLKE HHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH YYEFLEQAVMRPKVD HHHHHHHHHHCCCCC >Mature Secondary Structure MRNEDFKSFMAQEYNEAFDSIGMMIETPNVGDQITLKDPRRQINLSYLSRNKITEIARRK CCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCCHHEEHHHHHHHHHHHHHHHH IKSYKLEMLITVSEFHQELRDSIYNHVFINAGNFDANGCTKIITKAIKSSERKRKSEDYY HHHHHHHHEEEHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCE FPLLAHGLGDERISIGIAEIIPRKDVISFARPHINHEHICRVEEFCESNKYPYNHFLKFT EHHHHCCCCCCHHEEHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHEEEEE ISKRSKESRRRVSGQVANFIVGILYLFSEHWRISSEFISLSINPYPNYDGFFFTKLEKEN EHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECEEEEEEECCCCCCCCEEEEEEECCC IGFNFSSKGTILWSEKFWIKFKEEFNPDLSIVFGEIISMAVEPRNKPVIVDRLIDAIYIF CCCCCCCCCEEEEECCEEEEEHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH SSALQDKDKSSKIIKLTTALERLVSLSNKESNDVSINFRKRVAILVSIYHDDFDKWNEVA HHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEHHHEEEEEHHHHCCHHHHHHHH KEMYDIRSSIIHGSWSLYKDIEPLYVDKYSELTSKAILTACIGFYKRGLESDSNDTLLKE HHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH YYEFLEQAVMRPKVD HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA