| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930453
Identifier: 218930453
GI number: 218930453
Start: 3839952
End: 3841862
Strand: Reverse
Name: 218930453
Synonym: YPO3437
Alternate gene names: NA
Gene position: 3841862-3839952 (Counterclockwise)
Preceding gene: 218930454
Following gene: 218930450
Centisome position: 82.55
GC content: 47.04
Gene sequence:
>1911_bases ATGCAGCAATTACTCATTAGAATGGTTTCGTCTGATATGAGCACCATTACCCCTCACTACCGCAACGTACAACAGTTGTT GCAAAGTCAGTCGTTTTCCATTGATGAGTACCAGCGCGAGTACAAATGGGAAAAGGAGAACATTGACGAGCTACTCTCTG ATCTTCAGGGCAAATTTTTCAGCTATAGCAAACCGGATGATGAAACCAGTGCCGTCAGCAGCTATGGCGAGTATTTTCTT GGTTCTATCATTGTCAGCAAGCGCAACAACAAAAACTACTTAATTGATGGTCAGCAGCGGGTCACTTCCTTGACACTGTT GCTGATTTGCCTGTACCGAGCAGCCCAAGAAAAGGGGCTGCCGGTAGCCCAAACCTTAGCCCCACTCATTTTCAGTGACA ACCTCGGTAAGCCCAAGTTTAACCTTGACATCTCTGAGCGGTTACCTGTTATTAATGCACTATTTAAAGGGGAAGCGTTC AATCCGGACGGTAAGGATGAATCCATCCAAACCATGTATGCTCGTTATAGCGATATTGAAGTAAATGACCTGATGGCAGA ACTAGGAGACGCGCTGCCACATTTCATCTACTGGTTGTTGACGAGGGTAGGTTTGATCGAGATTGCCACGGATAACGATA GCTATGCCTACGCTATTTTTGAAACGATGAATGATCGGGGTAAGCCACTGAGTCCAGTCGATATGTTGAAGGCCTATCTG TTGGCTCCAATTGAAGAACAGGATGCGCGATTACAGGCTAATCAGGTCTGGAAACAACAAGTTTTGGAATTGATCTCTTG GGGAGGGGGGCACGAACCGGAGCGTGATGCCAACTGTATTAAGGCGTGGTTACGGGCACAGTACGCAGAAAGTATCCGTG AACGTAAGGCGGGCTCGGTCGATAAAGATTGGGAGTTGATCGGTTCAGTCTTTCACCGCTGGGTGCGAGAAAACAACTCT CGCCTGGGTTTGGGTAAAGCTCAGGAAAATCAGAACATGATGGCTGTAAGCTTTCCATTTTTTGCCAAAGCGTACCGACG TATCCTACATACCAGCAAGCATTACACACCGAAGCTACGAGCGGTCTACTACAACGCTCACAATGATTTTACTTGGCAGA ATACGGTGCTCCTAGCATCGTTGATAGAAACTGACGACGACGAGACAGTGGATCGCAAACTGGCGGTCACAGCTACTTAT TTGGACATCTGGTTGATGCGTCGAGTAGTGAATTATGTCCGGGTTGGATACTCAAGTGTGTCTTACGCTATGTGGTTATT GTGCCGGGAGATCAGGCGTAAACCGCTATCGGAGTTGGTAGCTATCCTCCAGAATAAGTTGGCAGATGATGATGTTACGT TCTCCGGCTACGCAGTAAAAGGACGAACGGGTATTGATGGTTTAGGGCTCAATCAATTCAGCCGCCGTTATATCTACCAT TTGCTAGCACGACTGACAGAAGCAACTGAGATCGGCGCAGGGCGTACTGAGACATTTGATCGATTGGTGGACCGTACTCT CAAGAACCCATTTGACATCGAACATATCTGGGCTGATGATTACGAAATCGTGAAAGATCAGTTCAGTACTGAGCAGGAAT TTCAAGATTGGCGCAATCATGTTGCGTCAATTTTACTCTTACCAGCAGATGTTAACCGGAGCCTGCAGGACAAACCGTTT CCCCTGAAGCGGGTGCACTATGCCAAACAGAACTTCTTTGCCGCAAGTTTGGACTCCAGTGTTTACGAACATCAGCCACA GTTTCAGCAGTTTTCTACCAAATATGAGCTGCCTTTCAAATTCGCTGAGGTATTCGATAAAGCGGAGCAACAGGTACGCC GGAAACTGATTGCGGGATTAGTAGAATTAATTTGGTCACCGAATCGTTTATGTGAGGCCGCCCATGTCTGA
Upstream 100 bases:
>100_bases GTGTTATTTGCGGGCTTTTAACTCAACTGTGCCACTACAGATTTTGAAACGCACTGATTTTGAACAAGGGTCAAAGACAC TGCTCCGTAAGCAAGGCATA
Downstream 100 bases:
>100_bases GCAACCACTACAGAACTCGCTTTTTGAGGACGATTACCTGCTACGGGAACTTGGGCAGGTAGCACATGTTCCACAGGTCG CTTTAACAGAGTTAGTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MQQLLIRMVSSDMSTITPHYRNVQQLLQSQSFSIDEYQREYKWEKENIDELLSDLQGKFFSYSKPDDETSAVSSYGEYFL GSIIVSKRNNKNYLIDGQQRVTSLTLLLICLYRAAQEKGLPVAQTLAPLIFSDNLGKPKFNLDISERLPVINALFKGEAF NPDGKDESIQTMYARYSDIEVNDLMAELGDALPHFIYWLLTRVGLIEIATDNDSYAYAIFETMNDRGKPLSPVDMLKAYL LAPIEEQDARLQANQVWKQQVLELISWGGGHEPERDANCIKAWLRAQYAESIRERKAGSVDKDWELIGSVFHRWVRENNS RLGLGKAQENQNMMAVSFPFFAKAYRRILHTSKHYTPKLRAVYYNAHNDFTWQNTVLLASLIETDDDETVDRKLAVTATY LDIWLMRRVVNYVRVGYSSVSYAMWLLCREIRRKPLSELVAILQNKLADDDVTFSGYAVKGRTGIDGLGLNQFSRRYIYH LLARLTEATEIGAGRTETFDRLVDRTLKNPFDIEHIWADDYEIVKDQFSTEQEFQDWRNHVASILLLPADVNRSLQDKPF PLKRVHYAKQNFFAASLDSSVYEHQPQFQQFSTKYELPFKFAEVFDKAEQQVRRKLIAGLVELIWSPNRLCEAAHV
Sequences:
>Translated_636_residues MQQLLIRMVSSDMSTITPHYRNVQQLLQSQSFSIDEYQREYKWEKENIDELLSDLQGKFFSYSKPDDETSAVSSYGEYFL GSIIVSKRNNKNYLIDGQQRVTSLTLLLICLYRAAQEKGLPVAQTLAPLIFSDNLGKPKFNLDISERLPVINALFKGEAF NPDGKDESIQTMYARYSDIEVNDLMAELGDALPHFIYWLLTRVGLIEIATDNDSYAYAIFETMNDRGKPLSPVDMLKAYL LAPIEEQDARLQANQVWKQQVLELISWGGGHEPERDANCIKAWLRAQYAESIRERKAGSVDKDWELIGSVFHRWVRENNS RLGLGKAQENQNMMAVSFPFFAKAYRRILHTSKHYTPKLRAVYYNAHNDFTWQNTVLLASLIETDDDETVDRKLAVTATY LDIWLMRRVVNYVRVGYSSVSYAMWLLCREIRRKPLSELVAILQNKLADDDVTFSGYAVKGRTGIDGLGLNQFSRRYIYH LLARLTEATEIGAGRTETFDRLVDRTLKNPFDIEHIWADDYEIVKDQFSTEQEFQDWRNHVASILLLPADVNRSLQDKPF PLKRVHYAKQNFFAASLDSSVYEHQPQFQQFSTKYELPFKFAEVFDKAEQQVRRKLIAGLVELIWSPNRLCEAAHV >Mature_636_residues MQQLLIRMVSSDMSTITPHYRNVQQLLQSQSFSIDEYQREYKWEKENIDELLSDLQGKFFSYSKPDDETSAVSSYGEYFL GSIIVSKRNNKNYLIDGQQRVTSLTLLLICLYRAAQEKGLPVAQTLAPLIFSDNLGKPKFNLDISERLPVINALFKGEAF NPDGKDESIQTMYARYSDIEVNDLMAELGDALPHFIYWLLTRVGLIEIATDNDSYAYAIFETMNDRGKPLSPVDMLKAYL LAPIEEQDARLQANQVWKQQVLELISWGGGHEPERDANCIKAWLRAQYAESIRERKAGSVDKDWELIGSVFHRWVRENNS RLGLGKAQENQNMMAVSFPFFAKAYRRILHTSKHYTPKLRAVYYNAHNDFTWQNTVLLASLIETDDDETVDRKLAVTATY LDIWLMRRVVNYVRVGYSSVSYAMWLLCREIRRKPLSELVAILQNKLADDDVTFSGYAVKGRTGIDGLGLNQFSRRYIYH LLARLTEATEIGAGRTETFDRLVDRTLKNPFDIEHIWADDYEIVKDQFSTEQEFQDWRNHVASILLLPADVNRSLQDKPF PLKRVHYAKQNFFAASLDSSVYEHQPQFQQFSTKYELPFKFAEVFDKAEQQVRRKLIAGLVELIWSPNRLCEAAHV
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73564; Mature: 73564
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQLLIRMVSSDMSTITPHYRNVQQLLQSQSFSIDEYQREYKWEKENIDELLSDLQGKFF CHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHC SYSKPDDETSAVSSYGEYFLGSIIVSKRNNKNYLIDGQQRVTSLTLLLICLYRAAQEKGL CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCC PVAQTLAPLIFSDNLGKPKFNLDISERLPVINALFKGEAFNPDGKDESIQTMYARYSDIE CHHHHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCH VNDLMAELGDALPHFIYWLLTRVGLIEIATDNDSYAYAIFETMNDRGKPLSPVDMLKAYL HHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEHHCCCCCCCCHHHHHHHHH LAPIEEQDARLQANQVWKQQVLELISWGGGHEPERDANCIKAWLRAQYAESIRERKAGSV HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC DKDWELIGSVFHRWVRENNSRLGLGKAQENQNMMAVSFPFFAKAYRRILHTSKHYTPKLR CHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCEE AVYYNAHNDFTWQNTVLLASLIETDDDETVDRKLAVTATYLDIWLMRRVVNYVRVGYSSV EEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH SYAMWLLCREIRRKPLSELVAILQNKLADDDVTFSGYAVKGRTGIDGLGLNQFSRRYIYH HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEECCEEEECCCCCCCCCHHHHHHHHHHH LLARLTEATEIGAGRTETFDRLVDRTLKNPFDIEHIWADDYEIVKDQFSTEQEFQDWRNH HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHCCHHHHHHHHHH VASILLLPADVNRSLQDKPFPLKRVHYAKQNFFAASLDSSVYEHQPQFQQFSTKYELPFK HHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHH FAEVFDKAEQQVRRKLIAGLVELIWSPNRLCEAAHV HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC >Mature Secondary Structure MQQLLIRMVSSDMSTITPHYRNVQQLLQSQSFSIDEYQREYKWEKENIDELLSDLQGKFF CHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHC SYSKPDDETSAVSSYGEYFLGSIIVSKRNNKNYLIDGQQRVTSLTLLLICLYRAAQEKGL CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCC PVAQTLAPLIFSDNLGKPKFNLDISERLPVINALFKGEAFNPDGKDESIQTMYARYSDIE CHHHHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCH VNDLMAELGDALPHFIYWLLTRVGLIEIATDNDSYAYAIFETMNDRGKPLSPVDMLKAYL HHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEHHCCCCCCCCHHHHHHHHH LAPIEEQDARLQANQVWKQQVLELISWGGGHEPERDANCIKAWLRAQYAESIRERKAGSV HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC DKDWELIGSVFHRWVRENNSRLGLGKAQENQNMMAVSFPFFAKAYRRILHTSKHYTPKLR CHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCEE AVYYNAHNDFTWQNTVLLASLIETDDDETVDRKLAVTATYLDIWLMRRVVNYVRVGYSSV EEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH SYAMWLLCREIRRKPLSELVAILQNKLADDDVTFSGYAVKGRTGIDGLGLNQFSRRYIYH HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEECCEEEECCCCCCCCCHHHHHHHHHHH LLARLTEATEIGAGRTETFDRLVDRTLKNPFDIEHIWADDYEIVKDQFSTEQEFQDWRNH HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHCCHHHHHHHHHH VASILLLPADVNRSLQDKPFPLKRVHYAKQNFFAASLDSSVYEHQPQFQQFSTKYELPFK HHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHH FAEVFDKAEQQVRRKLIAGLVELIWSPNRLCEAAHV HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA