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The map label for this gene is 218930006

Identifier: 218930006

GI number: 218930006

Start: 3302403

End: 3303005

Strand: Reverse

Name: 218930006

Synonym: YPO2955

Alternate gene names: NA

Gene position: 3303005-3302403 (Counterclockwise)

Preceding gene: 218930007

Following gene: 218929997

Centisome position: 70.98

GC content: 35.16

Gene sequence:

>603_bases
ATGTTCAGTGTGGCGATTAAAACCCGTAATGCTTTCTATGAGTTCGGGTTACTCTCTCTGCTCAAGAAAGTTCTTATAAA
AGAGGATGATATGGATTATTCCATTGTCCCCTCTCATGAAAAAAGAGATTCAAACAACGCGAATGTGATATTCAAAGATC
TCATGGTGATTGTTAACATATACCAAGAAAATAGTTTTATACAGAAAAACAATAGCAATAATAATAAACCTATGATGACG
GTTAATATTCCATTTAACAGCAGTCAGTTAGGGCTTTATGATGTCATCTCTAAAATCAAGAAAATTCTGAATATTGCGCG
TCTGAATTATAATATGATGATGAAAAGTGACCTGCAGAGAAGGATTGGTTTGAAAAACTATATACAACTTTCGATGACGG
AAAGTAAAGTTGTGCAACTCACCGGGAAAGGGCATAGCACGACCGATATATCGAAAATACTTGACCGCTCTGAAAAAACG
ATATTGACCCATCGTAGAAATGCCATCAGAAAGTTGGGCATGTTCAATCGGTTAGAGTTTTATAAGTATGCATCACTAAT
GCGAAATTACAGTAATAAAGACGCTGTTTTTATTTGCCTTTAA

Upstream 100 bases:

>100_bases
ATTCTAGTGTCATTTTTAACTACAGCGTTCATCTCTGGTGAGCTTCGCTCAAGGATAAGTGACCGGAAAATAGTGAATAA
AAAATAAGGAACGTAAAGAT

Downstream 100 bases:

>100_bases
TAAATGTCACTTCCTCGGCCAGGATAAAAACTGGCTGTTATCGTATATAGCCAAAATGGAATGAGCTGTAGATAGGCCCG
TTACTGCCGCCTCTCCCTGC

Product: putative luxR family regulatory protein

Products: NA

Alternate protein names: LuxR-Family Transcriptional Regulator

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MFSVAIKTRNAFYEFGLLSLLKKVLIKEDDMDYSIVPSHEKRDSNNANVIFKDLMVIVNIYQENSFIQKNNSNNNKPMMT
VNIPFNSSQLGLYDVISKIKKILNIARLNYNMMMKSDLQRRIGLKNYIQLSMTESKVVQLTGKGHSTTDISKILDRSEKT
ILTHRRNAIRKLGMFNRLEFYKYASLMRNYSNKDAVFICL

Sequences:

>Translated_200_residues
MFSVAIKTRNAFYEFGLLSLLKKVLIKEDDMDYSIVPSHEKRDSNNANVIFKDLMVIVNIYQENSFIQKNNSNNNKPMMT
VNIPFNSSQLGLYDVISKIKKILNIARLNYNMMMKSDLQRRIGLKNYIQLSMTESKVVQLTGKGHSTTDISKILDRSEKT
ILTHRRNAIRKLGMFNRLEFYKYASLMRNYSNKDAVFICL
>Mature_200_residues
MFSVAIKTRNAFYEFGLLSLLKKVLIKEDDMDYSIVPSHEKRDSNNANVIFKDLMVIVNIYQENSFIQKNNSNNNKPMMT
VNIPFNSSQLGLYDVISKIKKILNIARLNYNMMMKSDLQRRIGLKNYIQLSMTESKVVQLTGKGHSTTDISKILDRSEKT
ILTHRRNAIRKLGMFNRLEFYKYASLMRNYSNKDAVFICL

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23282; Mature: 23282

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSVAIKTRNAFYEFGLLSLLKKVLIKEDDMDYSIVPSHEKRDSNNANVIFKDLMVIVNI
CEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHH
YQENSFIQKNNSNNNKPMMTVNIPFNSSQLGLYDVISKIKKILNIARLNYNMMMKSDLQR
HHCCCEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RIGLKNYIQLSMTESKVVQLTGKGHSTTDISKILDRSEKTILTHRRNAIRKLGMFNRLEF
HCCCCHHEEEEECCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHH
YKYASLMRNYSNKDAVFICL
HHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MFSVAIKTRNAFYEFGLLSLLKKVLIKEDDMDYSIVPSHEKRDSNNANVIFKDLMVIVNI
CEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHH
YQENSFIQKNNSNNNKPMMTVNIPFNSSQLGLYDVISKIKKILNIARLNYNMMMKSDLQR
HHCCCEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RIGLKNYIQLSMTESKVVQLTGKGHSTTDISKILDRSEKTILTHRRNAIRKLGMFNRLEF
HCCCCHHEEEEECCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHH
YKYASLMRNYSNKDAVFICL
HHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA