| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929227
Identifier: 218929227
GI number: 218929227
Start: 2392729
End: 2393361
Strand: Direct
Name: 218929227
Synonym: YPO2124
Alternate gene names: NA
Gene position: 2392729-2393361 (Clockwise)
Preceding gene: 218929226
Following gene: 218929229
Centisome position: 51.42
GC content: 44.08
Gene sequence:
>633_bases ATGAACAAATATATAGCGAACGAGAAAATGCCATTACTTATCCCCGCGGCTGGCTTTGATGCCAAACTAAGCATGACAGA GAAAAACATAGAGCATACTGAAGCCTTTATGGCATCAGGCGTGAAAGAATTCTCTTTGCCTGGATTTGTAACTCCTCACG GGTATCGTCTACTTGTTTCTGTAAACGGGGAGCATTACCGCCTTGTTACAGACGCAGCTATACCGGAAACAGTATATGCG GTGAAACTGGCTTTCCTTGAGCATATCGTTCCTACACGTAAAACATGTACTCAGATTTTAGTCTGGCGTACTGTTCAACC ACAGCATGATAGTGCAGTCCATGGTTTGCCTCAGGAGTTTTTTCGCCACTTCCTGACTCAGTACTCAATCGTTGTTTCTG ATAGCGAACAGACTAATGAAGGTCGTCGTTTCTGGGAGCGAATGATTGCATGGGCTATTCAGGCTGAAGGGCATTATGTA TATGTGTCGAATGGCTCAGAGGAAGATCGCCCACTGACTTTTATGACTAACTGGGATGATTTTTATGGGACATGGGCTGA TTTTTGTTGGGGTGATGACAGAGATTGCCATTGCCATAGACTATTCGTGATCAGTACAGAACAATTGCACTAA
Upstream 100 bases:
>100_bases CTTCTTTTTAGATCATAACTGCGATAACGGTTATGCCGTTACACCGAAGACGAAATTTCGGTTTTTGTCATAAGTACTCC GGTAGTATCGGGAGGAAATA
Downstream 100 bases:
>100_bases GTTGCTCCGAATAAAAACTAAACCCGCTCCGGCGGGTTTTTGCATTCTAGCCCACTCTGGTGGGTTTTTTATTGGCATCT ACTCAGGGATCTCAATCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MNKYIANEKMPLLIPAAGFDAKLSMTEKNIEHTEAFMASGVKEFSLPGFVTPHGYRLLVSVNGEHYRLVTDAAIPETVYA VKLAFLEHIVPTRKTCTQILVWRTVQPQHDSAVHGLPQEFFRHFLTQYSIVVSDSEQTNEGRRFWERMIAWAIQAEGHYV YVSNGSEEDRPLTFMTNWDDFYGTWADFCWGDDRDCHCHRLFVISTEQLH
Sequences:
>Translated_210_residues MNKYIANEKMPLLIPAAGFDAKLSMTEKNIEHTEAFMASGVKEFSLPGFVTPHGYRLLVSVNGEHYRLVTDAAIPETVYA VKLAFLEHIVPTRKTCTQILVWRTVQPQHDSAVHGLPQEFFRHFLTQYSIVVSDSEQTNEGRRFWERMIAWAIQAEGHYV YVSNGSEEDRPLTFMTNWDDFYGTWADFCWGDDRDCHCHRLFVISTEQLH >Mature_210_residues MNKYIANEKMPLLIPAAGFDAKLSMTEKNIEHTEAFMASGVKEFSLPGFVTPHGYRLLVSVNGEHYRLVTDAAIPETVYA VKLAFLEHIVPTRKTCTQILVWRTVQPQHDSAVHGLPQEFFRHFLTQYSIVVSDSEQTNEGRRFWERMIAWAIQAEGHYV YVSNGSEEDRPLTFMTNWDDFYGTWADFCWGDDRDCHCHRLFVISTEQLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24291; Mature: 24291
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKYIANEKMPLLIPAAGFDAKLSMTEKNIEHTEAFMASGVKEFSLPGFVTPHGYRLLVS CCCCCCCCCCCEEEECCCCCCEEEECCCCHHHHHHHHHCCCHHHCCCCEECCCCEEEEEE VNGEHYRLVTDAAIPETVYAVKLAFLEHIVPTRKTCTQILVWRTVQPQHDSAVHGLPQEF ECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHEEEEEECCCCCCCHHCCCHHHH FRHFLTQYSIVVSDSEQTNEGRRFWERMIAWAIQAEGHYVYVSNGSEEDRPLTFMTNWDD HHHHHHHEEEEEECCCCCHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCEEEEECCCH FYGTWADFCWGDDRDCHCHRLFVISTEQLH HHCCHHHHCCCCCCCCEEEEEEEEECCCCC >Mature Secondary Structure MNKYIANEKMPLLIPAAGFDAKLSMTEKNIEHTEAFMASGVKEFSLPGFVTPHGYRLLVS CCCCCCCCCCCEEEECCCCCCEEEECCCCHHHHHHHHHCCCHHHCCCCEECCCCEEEEEE VNGEHYRLVTDAAIPETVYAVKLAFLEHIVPTRKTCTQILVWRTVQPQHDSAVHGLPQEF ECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHEEEEEECCCCCCCHHCCCHHHH FRHFLTQYSIVVSDSEQTNEGRRFWERMIAWAIQAEGHYVYVSNGSEEDRPLTFMTNWDD HHHHHHHEEEEEECCCCCHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCEEEEECCCH FYGTWADFCWGDDRDCHCHRLFVISTEQLH HHCCHHHHCCCCCCCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA