| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929229
Identifier: 218929229
GI number: 218929229
Start: 2394149
End: 2395243
Strand: Direct
Name: 218929229
Synonym: YPO2126
Alternate gene names: NA
Gene position: 2394149-2395243 (Clockwise)
Preceding gene: 218929227
Following gene: 218929230
Centisome position: 51.45
GC content: 45.21
Gene sequence:
>1095_bases ATGATGAAGCCTAATAATGGCGAAGCCCCGAAGTGCGCGAACACGAACGAGGCTTCTAGTTTGTCAGTATCTACCAAGGA ACTAACAATGAATAGTTTAGCAAAGTCAAATGCAAATAACACGCAAACTTCCGCAATATCACAGTTCCATTTTGATACTC ATGCTGTTCGGGTGTTAAGTATCCATAATGAGCCATGGTTCGTTGCTGCTGATTTATGCCGTGTGCTCGAACTATCGAAC CCAACCAAGTCCATCATGAATTTAGATGATGATGAGAAAGCCCTAACTTCAATTCAGGGCTTAAGTCGTGGTAATGAAGA GGCCAATATCGTAAGCGAGTCAGGAATGTATACACTGATACTCCGCTGCCGTGATGCTGTAAAGCCGGGAACCATACCTC ACCGAGTGCGCAAGTGGGTTACTGCCGAAGTTCTTCCCGCAATTCGTAAAACAGGAAGCTATGACAGTCCACGCAAAGCC ACCAAGAAAGCATTGCCCGGTAAAATCACCATCGAGCAACAGGAAGCGGTCAAACAGTTAGTAATGAATCGCGGCAAGGC TCTACCAAAAGAGAACCAAGCCAAGGCCATGATCACTATGTGGTCAGCACTAAAGACTCACTTTGGTTGCAGCTACAAAG AAATCAGCGAAGACCAGTTCACGGAGGCGTTATCGTTGGCGGCGCGGGTGACTATAGAGGGTGAGTTCCTCGGCAAGCAG GAAGCGTTACCAGTGCCGAAGTTGGAAGTTAGTCTACCTATCCAGTGGTGGTTCGATAACAACCCAGCGGTTAAATACGG TAACCGAGAGAACATCACCAAAATGAAACAGAACCATTTTTGTTTCACCCCATCCCTCAACGTGACTATTGATATGTTGT GCGGTGATAGCGATACATCTGCTGCGATACAGCTTATTAATATCATGGAGATGGCTGGTTATGATGTTTCAGCACCTAAG GCTGAGATTGTTGCGATGCGCAAACATATCGCAAATGTTGAATATGGGATGAAAGCAATATCCGACGCCTGTATTCGGGC CAAAAATAAAAAGGTTATTTTCCGTGGTAAAAAAGCTGATATAACCATTAACTAA
Upstream 100 bases:
>100_bases TGTCTGGCAATACAAAACAATGGTGAAAATCAGAGTCGGCAATTTAATACTGAGGTGATTTATCAGTTGAGAAAAGTGTA TGGATTGATAGAGAAGAGAA
Downstream 100 bases:
>100_bases CAATTAATTCAGCATCACACAAAACCCAACCCACTTAACTGTGGGTTTTTGCGTTATTTTGCAGCGATCCCCTGCTATGA TGTAACGAACTGTTACTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Antirepressor; BRO Family Protein; BRO N-Terminal; BRO Domain-Containing Protein; KilA Domain Protein; Antirepressor N; Phage Protein; Gp54 Protein; Phage Antirepressor; Phage Associated-Antirepressor; BRO Domain Protein; Bacteriophage; Xin-Antitoxin System Toxin Component Bro Family; Phage-Encoded Protein; BRO Family N-Terminal Domain Protein; Phage-Like Protein; Phage Associated-Antirepressor BRO; Anti-Repressor-Like Protein; BRO-Like Protein
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MMKPNNGEAPKCANTNEASSLSVSTKELTMNSLAKSNANNTQTSAISQFHFDTHAVRVLSIHNEPWFVAADLCRVLELSN PTKSIMNLDDDEKALTSIQGLSRGNEEANIVSESGMYTLILRCRDAVKPGTIPHRVRKWVTAEVLPAIRKTGSYDSPRKA TKKALPGKITIEQQEAVKQLVMNRGKALPKENQAKAMITMWSALKTHFGCSYKEISEDQFTEALSLAARVTIEGEFLGKQ EALPVPKLEVSLPIQWWFDNNPAVKYGNRENITKMKQNHFCFTPSLNVTIDMLCGDSDTSAAIQLINIMEMAGYDVSAPK AEIVAMRKHIANVEYGMKAISDACIRAKNKKVIFRGKKADITIN
Sequences:
>Translated_364_residues MMKPNNGEAPKCANTNEASSLSVSTKELTMNSLAKSNANNTQTSAISQFHFDTHAVRVLSIHNEPWFVAADLCRVLELSN PTKSIMNLDDDEKALTSIQGLSRGNEEANIVSESGMYTLILRCRDAVKPGTIPHRVRKWVTAEVLPAIRKTGSYDSPRKA TKKALPGKITIEQQEAVKQLVMNRGKALPKENQAKAMITMWSALKTHFGCSYKEISEDQFTEALSLAARVTIEGEFLGKQ EALPVPKLEVSLPIQWWFDNNPAVKYGNRENITKMKQNHFCFTPSLNVTIDMLCGDSDTSAAIQLINIMEMAGYDVSAPK AEIVAMRKHIANVEYGMKAISDACIRAKNKKVIFRGKKADITIN >Mature_364_residues MMKPNNGEAPKCANTNEASSLSVSTKELTMNSLAKSNANNTQTSAISQFHFDTHAVRVLSIHNEPWFVAADLCRVLELSN PTKSIMNLDDDEKALTSIQGLSRGNEEANIVSESGMYTLILRCRDAVKPGTIPHRVRKWVTAEVLPAIRKTGSYDSPRKA TKKALPGKITIEQQEAVKQLVMNRGKALPKENQAKAMITMWSALKTHFGCSYKEISEDQFTEALSLAARVTIEGEFLGKQ EALPVPKLEVSLPIQWWFDNNPAVKYGNRENITKMKQNHFCFTPSLNVTIDMLCGDSDTSAAIQLINIMEMAGYDVSAPK AEIVAMRKHIANVEYGMKAISDACIRAKNKKVIFRGKKADITIN
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40318; Mature: 40318
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKPNNGEAPKCANTNEASSLSVSTKELTMNSLAKSNANNTQTSAISQFHFDTHAVRVLS CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEE IHNEPWFVAADLCRVLELSNPTKSIMNLDDDEKALTSIQGLSRGNEEANIVSESGMYTLI ECCCCCEEHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEE LRCRDAVKPGTIPHRVRKWVTAEVLPAIRKTGSYDSPRKATKKALPGKITIEQQEAVKQL EEHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECHHHHHHHH VMNRGKALPKENQAKAMITMWSALKTHFGCSYKEISEDQFTEALSLAARVTIEGEFLGKQ HHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHEEEEEHHCCCCC EALPVPKLEVSLPIQWWFDNNPAVKYGNRENITKMKQNHFCFTPSLNVTIDMLCGDSDTS CCCCCCCEEEEEEEEEEECCCCCEEECCCHHHHHHHCCCEEECCCCCEEEEEEECCCCHH AAIQLINIMEMAGYDVSAPKAEIVAMRKHIANVEYGMKAISDACIRAKNKKVIFRGKKAD HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC ITIN EEEC >Mature Secondary Structure MMKPNNGEAPKCANTNEASSLSVSTKELTMNSLAKSNANNTQTSAISQFHFDTHAVRVLS CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEE IHNEPWFVAADLCRVLELSNPTKSIMNLDDDEKALTSIQGLSRGNEEANIVSESGMYTLI ECCCCCEEHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEE LRCRDAVKPGTIPHRVRKWVTAEVLPAIRKTGSYDSPRKATKKALPGKITIEQQEAVKQL EEHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECHHHHHHHH VMNRGKALPKENQAKAMITMWSALKTHFGCSYKEISEDQFTEALSLAARVTIEGEFLGKQ HHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHEEEEEHHCCCCC EALPVPKLEVSLPIQWWFDNNPAVKYGNRENITKMKQNHFCFTPSLNVTIDMLCGDSDTS CCCCCCCEEEEEEEEEEECCCCCEEECCCHHHHHHHCCCEEECCCCCEEEEEEECCCCHH AAIQLINIMEMAGYDVSAPKAEIVAMRKHIANVEYGMKAISDACIRAKNKKVIFRGKKAD HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC ITIN EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA