| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929213
Identifier: 218929213
GI number: 218929213
Start: 2381325
End: 2382530
Strand: Direct
Name: 218929213
Synonym: YPO2110
Alternate gene names: NA
Gene position: 2381325-2382530 (Clockwise)
Preceding gene: 218929212
Following gene: 218929214
Centisome position: 51.17
GC content: 49.42
Gene sequence:
>1206_bases ATGACCACAACCGTTAACTCTGACCTGATCATCTATAACGATCTGGCTCAGACATCATATCTTGAGCGCCGACAGGACAA CCTCGATGTGTTCAACGCCTCATCTAATGGCGCTATTGTGCTGGATAATGCCTTGATTGAAGGAGATTTCCGTAAACGTG CTTTCTATCAGCTCGGCGGCAGTATCGAACACCGTGATGTTGATTCTACCGGGAAAGTTACCGGCAAGAAAATTGGTGCT GGTGAATCAGTGGGTGTGAAGGCTCCGTGGAAATACGGCCCTTACCAGACGACTGAAGAAGCGTTTAAGCGTCGTGGCCG TGATGTGTCTGAATTCTCCGAAATTGTGGGTGTAGATGTTGCAGACGCCTCACTGGAGGGATTCATCAAGTACGGTATTC AGGCGTTGAGTGCTTCCATCGGTGCCAACCCTGATATGGTTGTAACTGCCAATATTGAAGTTGATGGCAAGAAAACCCTG ACCAAAGGTATGCGCAAGTACGGTGATCGCTTTGGCCGTATTGCGCTGTTTGTTATGCACTCGTCTACCTATTTTGACAT CATTGATCAGGCGATTGCAGCCAAGATTTATGAAGAGGCAGGTGTTGTAGTGTATGGCGGTCAGCCTGGTACGCTGGGTA AACCGGTTCTGGTTACTGATACTGCGCCAATCGACGCCATCTTTGGTTTACTGCCCAACGCAGTCGTGATTACAGAGTCA CAGGCCCCCGGCTTCCGCTCATATCCAATCAATGATGAGGAAAACCTCGGCGTTGGCTACCGCGCAGAGGGGACTATCAA CATCGACTTGCTTGGTTATAGCTGGGACGAAACCAACGGCGGCAAGAATCCAAGCCTGACAGAAATTGGCGCGACCAATA GCTGGAAAAAACATGCAACTAGCAACAAAGTTACTGCCGGTGTGATGATTAAATTGGTTGCTGAAGATGTAGTGGCGGCC GGTGTCATTCTGAACAAATCGACGACTTCATTGGTTGTTGGTGCAGAGGAAACGCTTGTTGCTACCGTGGCACCATCTGA TGCCGCTAATAAAGCCGTTACCTGGGCTTCATCTGCTGCGGCAAAAGCAACAGTTGATGCCAATGGTAAGGTGACTGCTG TCGCAGCCGGAAGTGCAACTATTACTGCCAAGTGCGTGGATGGTAACTTTACAGCAACTTGTGTAGTGACTGTCACTGCT GCGTAA
Upstream 100 bases:
>100_bases AAGCGATCAACGATGACCTCAGCCCAAAAGGCGGATTTTATTCGCGCAAACGGGTCGCAGGCATTTTTAAAACTTCCGAA AGAATAAGGATTTATAATTT
Downstream 100 bases:
>100_bases TGGTGATGACTATGGGGGCTGTGGCCCCTTTTCTATTGGAGGAAAGGATGTTAGTAACCGATCCAACCTCACCAGATTTT AACAGCTATGCGTCAGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MTTTVNSDLIIYNDLAQTSYLERRQDNLDVFNASSNGAIVLDNALIEGDFRKRAFYQLGGSIEHRDVDSTGKVTGKKIGA GESVGVKAPWKYGPYQTTEEAFKRRGRDVSEFSEIVGVDVADASLEGFIKYGIQALSASIGANPDMVVTANIEVDGKKTL TKGMRKYGDRFGRIALFVMHSSTYFDIIDQAIAAKIYEEAGVVVYGGQPGTLGKPVLVTDTAPIDAIFGLLPNAVVITES QAPGFRSYPINDEENLGVGYRAEGTINIDLLGYSWDETNGGKNPSLTEIGATNSWKKHATSNKVTAGVMIKLVAEDVVAA GVILNKSTTSLVVGAEETLVATVAPSDAANKAVTWASSAAAKATVDANGKVTAVAAGSATITAKCVDGNFTATCVVTVTA A
Sequences:
>Translated_401_residues MTTTVNSDLIIYNDLAQTSYLERRQDNLDVFNASSNGAIVLDNALIEGDFRKRAFYQLGGSIEHRDVDSTGKVTGKKIGA GESVGVKAPWKYGPYQTTEEAFKRRGRDVSEFSEIVGVDVADASLEGFIKYGIQALSASIGANPDMVVTANIEVDGKKTL TKGMRKYGDRFGRIALFVMHSSTYFDIIDQAIAAKIYEEAGVVVYGGQPGTLGKPVLVTDTAPIDAIFGLLPNAVVITES QAPGFRSYPINDEENLGVGYRAEGTINIDLLGYSWDETNGGKNPSLTEIGATNSWKKHATSNKVTAGVMIKLVAEDVVAA GVILNKSTTSLVVGAEETLVATVAPSDAANKAVTWASSAAAKATVDANGKVTAVAAGSATITAKCVDGNFTATCVVTVTA A >Mature_400_residues TTTVNSDLIIYNDLAQTSYLERRQDNLDVFNASSNGAIVLDNALIEGDFRKRAFYQLGGSIEHRDVDSTGKVTGKKIGAG ESVGVKAPWKYGPYQTTEEAFKRRGRDVSEFSEIVGVDVADASLEGFIKYGIQALSASIGANPDMVVTANIEVDGKKTLT KGMRKYGDRFGRIALFVMHSSTYFDIIDQAIAAKIYEEAGVVVYGGQPGTLGKPVLVTDTAPIDAIFGLLPNAVVITESQ APGFRSYPINDEENLGVGYRAEGTINIDLLGYSWDETNGGKNPSLTEIGATNSWKKHATSNKVTAGVMIKLVAEDVVAAG VILNKSTTSLVVGAEETLVATVAPSDAANKAVTWASSAAAKATVDANGKVTAVAAGSATITAKCVDGNFTATCVVTVTAA
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003343 - InterPro: IPR008964 - InterPro: IPR022409 [H]
Pfam domain/function: PF02368 Big_2 [H]
EC number: NA
Molecular weight: Translated: 42186; Mature: 42055
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTVNSDLIIYNDLAQTSYLERRQDNLDVFNASSNGAIVLDNALIEGDFRKRAFYQLGG CCEEECCCEEEEECHHHHHHHHHHCCCCEEEECCCCCEEEEECEEECCCHHHHHHHHHCC SIEHRDVDSTGKVTGKKIGAGESVGVKAPWKYGPYQTTEEAFKRRGRDVSEFSEIVGVDV CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCC ADASLEGFIKYGIQALSASIGANPDMVVTANIEVDGKKTLTKGMRKYGDRFGRIALFVMH CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCEEEEEEEE SSTYFDIIDQAIAAKIYEEAGVVVYGGQPGTLGKPVLVTDTAPIDAIFGLLPNAVVITES CCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCEEEEECC QAPGFRSYPINDEENLGVGYRAEGTINIDLLGYSWDETNGGKNPSLTEIGATNSWKKHAT CCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEEECCCCCCCCCCCEEECCCCCCHHHHCC SNKVTAGVMIKLVAEDVVAAGVILNKSTTSLVVGAEETLVATVAPSDAANKAVTWASSAA CCCEEHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCEEEEEECCCCCCCCEEEEECCCC AKATVDANGKVTAVAAGSATITAKCVDGNFTATCVVTVTAA CEEEECCCCCEEEEEECCEEEEEEEECCCEEEEEEEEEEEC >Mature Secondary Structure TTTVNSDLIIYNDLAQTSYLERRQDNLDVFNASSNGAIVLDNALIEGDFRKRAFYQLGG CEEECCCEEEEECHHHHHHHHHHCCCCEEEECCCCCEEEEECEEECCCHHHHHHHHHCC SIEHRDVDSTGKVTGKKIGAGESVGVKAPWKYGPYQTTEEAFKRRGRDVSEFSEIVGVDV CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCC ADASLEGFIKYGIQALSASIGANPDMVVTANIEVDGKKTLTKGMRKYGDRFGRIALFVMH CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCEEEEEEEE SSTYFDIIDQAIAAKIYEEAGVVVYGGQPGTLGKPVLVTDTAPIDAIFGLLPNAVVITES CCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCEEEEECC QAPGFRSYPINDEENLGVGYRAEGTINIDLLGYSWDETNGGKNPSLTEIGATNSWKKHAT CCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEEECCCCCCCCCCCEEECCCCCCHHHHCC SNKVTAGVMIKLVAEDVVAAGVILNKSTTSLVVGAEETLVATVAPSDAANKAVTWASSAA CCCEEHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCEEEEEECCCCCCCCEEEEECCCC AKATVDANGKVTAVAAGSATITAKCVDGNFTATCVVTVTAA CEEEECCCCCEEEEEECCEEEEEEEECCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11466286; 8226639 [H]