| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218929212
Identifier: 218929212
GI number: 218929212
Start: 2380538
End: 2381311
Strand: Direct
Name: 218929212
Synonym: YPO2109
Alternate gene names: NA
Gene position: 2380538-2381311 (Clockwise)
Preceding gene: 218929211
Following gene: 218929213
Centisome position: 51.15
GC content: 50.78
Gene sequence:
>774_bases ATGCTATTCCGAAATATCGCACGTAAATATTATGCCGAGGCAGGTGAAGGTGGCGAAGGTGGAGGCGGGGCAGCCGCAGC TATCACGCCAGAGATTCAGGCATTGATTGATGCAAGAGTTAATGAATCTGTTACCGGCCTTAAAACCAAAAATAGCGAAT TACTCGGCAAGCTCAAAGAGCAAGGCGAGAACCTGAAACGCTATGACGGCATCGACCCGGACGCGGTGAAAACTATCCTG CAACGATTCTCTGACGACGAAGAAGCCAAGCTGATCGCCGCTGGAAAGATTGATGAGGTACTGGATAAACGCACTGAGCG ATTACGGGCTGATGTCGATAAAAAACTCAAAGTTGCCAATGAACGCGCTGAGAAAGCCGAAAATTTCAGCAAAAAATTCA GTGATCGGGTGCTTGGTGATGCAATTCGCTCCGCCGCATTGAAAACCGGCGCATTGCCGGGCGCTGCTGACGACATCATT CTGCGCGCAAAAGGCGTATTTACTCTCAACGATGAAGGTGAGGCCGTCGCCGTTGATAAAGATGGTTCAGCTCTACTGGG AAAGGATGGAAAAACACCACTTACCCCGCACGAATGGGCCGAATCACTGAAGGATGTTGCACCGCATCTCTGGCCGCAGG CTGAAGGCACTAACGCTGGCGGCCATAAGCCGAATAGCGGCGCACTCAAGCGATCAACGATGACCTCAGCCCAAAAGGCG GATTTTATTCGCGCAAACGGGTCGCAGGCATTTTTAAAACTTCCGAAAGAATAA
Upstream 100 bases:
>100_bases CCGCCAACGGTAACAAACTGAGTTATCCAAAATCTGAGCCTCGCCATCGTGCGGGGTTTTTTAATGGGCCAGGCCCAGCA ATAAATCCCAAGGGGACAGC
Downstream 100 bases:
>100_bases GGATTTATAATTTATGACCACAACCGTTAACTCTGACCTGATCATCTATAACGATCTGGCTCAGACATCATATCTTGAGC GCCGACAGGACAACCTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MLFRNIARKYYAEAGEGGEGGGGAAAAITPEIQALIDARVNESVTGLKTKNSELLGKLKEQGENLKRYDGIDPDAVKTIL QRFSDDEEAKLIAAGKIDEVLDKRTERLRADVDKKLKVANERAEKAENFSKKFSDRVLGDAIRSAALKTGALPGAADDII LRAKGVFTLNDEGEAVAVDKDGSALLGKDGKTPLTPHEWAESLKDVAPHLWPQAEGTNAGGHKPNSGALKRSTMTSAQKA DFIRANGSQAFLKLPKE
Sequences:
>Translated_257_residues MLFRNIARKYYAEAGEGGEGGGGAAAAITPEIQALIDARVNESVTGLKTKNSELLGKLKEQGENLKRYDGIDPDAVKTIL QRFSDDEEAKLIAAGKIDEVLDKRTERLRADVDKKLKVANERAEKAENFSKKFSDRVLGDAIRSAALKTGALPGAADDII LRAKGVFTLNDEGEAVAVDKDGSALLGKDGKTPLTPHEWAESLKDVAPHLWPQAEGTNAGGHKPNSGALKRSTMTSAQKA DFIRANGSQAFLKLPKE >Mature_257_residues MLFRNIARKYYAEAGEGGEGGGGAAAAITPEIQALIDARVNESVTGLKTKNSELLGKLKEQGENLKRYDGIDPDAVKTIL QRFSDDEEAKLIAAGKIDEVLDKRTERLRADVDKKLKVANERAEKAENFSKKFSDRVLGDAIRSAALKTGALPGAADDII LRAKGVFTLNDEGEAVAVDKDGSALLGKDGKTPLTPHEWAESLKDVAPHLWPQAEGTNAGGHKPNSGALKRSTMTSAQKA DFIRANGSQAFLKLPKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27549; Mature: 27549
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFRNIARKYYAEAGEGGEGGGGAAAAITPEIQALIDARVNESVTGLKTKNSELLGKLKE CCHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH QGENLKRYDGIDPDAVKTILQRFSDDEEAKLIAAGKIDEVLDKRTERLRADVDKKLKVAN HCCCHHHHCCCCHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH ERAEKAENFSKKFSDRVLGDAIRSAALKTGALPGAADDIILRAKGVFTLNDEGEAVAVDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEECCCCCEEEEEC DGSALLGKDGKTPLTPHEWAESLKDVAPHLWPQAEGTNAGGHKPNSGALKRSTMTSAQKA CCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH DFIRANGSQAFLKLPKE HHHHCCCCEEEEECCCC >Mature Secondary Structure MLFRNIARKYYAEAGEGGEGGGGAAAAITPEIQALIDARVNESVTGLKTKNSELLGKLKE CCHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH QGENLKRYDGIDPDAVKTILQRFSDDEEAKLIAAGKIDEVLDKRTERLRADVDKKLKVAN HCCCHHHHCCCCHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH ERAEKAENFSKKFSDRVLGDAIRSAALKTGALPGAADDIILRAKGVFTLNDEGEAVAVDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEECCCCCEEEEEC DGSALLGKDGKTPLTPHEWAESLKDVAPHLWPQAEGTNAGGHKPNSGALKRSTMTSAQKA CCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH DFIRANGSQAFLKLPKE HHHHCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA