| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929211
Identifier: 218929211
GI number: 218929211
Start: 2379304
End: 2380416
Strand: Direct
Name: 218929211
Synonym: YPO2108
Alternate gene names: NA
Gene position: 2379304-2380416 (Clockwise)
Preceding gene: 218929210
Following gene: 218929212
Centisome position: 51.13
GC content: 49.06
Gene sequence:
>1113_bases ATGGCAACGATTAACGAAAGGCTGCGTGATGAAGTAATAGCACATAGCCTGTTTCAGTCCCGTTATGGTGCTGGTGTTGC CCGTAAAATGGTTAAAGTGCTCAATGAGAGTGACGCAGAGCTATCGGCTCGTCTCATTGTGGCACTTGATGAGTTAAATC CAAACAGTGTCACAGTGAAGCGCTTAGAGAGCTTGCTAGCGAGTGTTCGCCAAGTGAACAAGCAAGCTGTTGATGCGATG TACACCTCTTTGTCTGATGAACTGTTGGACTTCGCAAAGCATGAGGTAAGTTATCAGCTTAGTTTGTTTGATTCTTTATT GCCGGGGCCAGTTTTAAATCACTTCCCATTAGCATCAATCACCAAAGAGCAGGTTTACGCCGCTGCAATGGCTCAACCGT TCCAAGGGCGATTGCTGCGAGACTGGGCTGAGAATATCGAAGCCGATCGGATGACGCGCATTATCAATACTGTGAAAAAC GGCTATCTGGCTGGCGATACAGTTGAACAGATGGCGCGGAAAGTACGCGGCACCAGAGCAAGAAACTATCAAGATGGCGC AATCGAGGCGGGCCGGAAGAATGTCACGGCGGTGGTGAAAACGGCTGTCACTCATATGGCTGCCGTAGCGCGGGATAAGT TTGCTGATAACAACAGTAACATTATCGACGCCAAGCAATGGCTCAGTACATTGGACAATAAAACCTCTCACGATTGCATT ATCCGTGACCGACTCAAATACACGCTGGAAGGTAAACCCATTGGTCACAAGATTCCATACCTTCAGGGGCCGGGGCGCAT TCATTTCTGTTGTCGCTCAATGGAAACATTAATCACTAAGTCATGGCGTGAGTTGGGGATTGATATTGATGAAATGGACG AAGGTACTCGCGCCAGTATGGATGGACAAGTTCCAGCGGGAACTACATATAGCGAATGGTTGCAACGGCAATCTTACCGC CGTCAGGTTCAGGTGTTGGGCGAGACCCGCGCAAGACTGATGCAAGATGGCGGTATGCGTACAGATGAATTCTTCACTGA TAAAGGGGAGTGGATAACGTTGCAGCAGCTTCGCGATATTGACGGCCGGGCATTCTCTGATGCAGGCCTGTAG
Upstream 100 bases:
>100_bases CCGGGCAATGCAAAAGCTGGATATTATCGACCCAGAATCTAACCCCAATGATGTTCTGGACGAATTGAAAAATCAGAGTC CCAGCCTGACAGGTGGCTAA
Downstream 100 bases:
>100_bases AAAATTACGCTTTAACAATTACCGCCAACGGTAACAAACTGAGTTATCCAAAATCTGAGCCTCGCCATCGTGCGGGGTTT TTTAATGGGCCAGGCCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MATINERLRDEVIAHSLFQSRYGAGVARKMVKVLNESDAELSARLIVALDELNPNSVTVKRLESLLASVRQVNKQAVDAM YTSLSDELLDFAKHEVSYQLSLFDSLLPGPVLNHFPLASITKEQVYAAAMAQPFQGRLLRDWAENIEADRMTRIINTVKN GYLAGDTVEQMARKVRGTRARNYQDGAIEAGRKNVTAVVKTAVTHMAAVARDKFADNNSNIIDAKQWLSTLDNKTSHDCI IRDRLKYTLEGKPIGHKIPYLQGPGRIHFCCRSMETLITKSWRELGIDIDEMDEGTRASMDGQVPAGTTYSEWLQRQSYR RQVQVLGETRARLMQDGGMRTDEFFTDKGEWITLQQLRDIDGRAFSDAGL
Sequences:
>Translated_370_residues MATINERLRDEVIAHSLFQSRYGAGVARKMVKVLNESDAELSARLIVALDELNPNSVTVKRLESLLASVRQVNKQAVDAM YTSLSDELLDFAKHEVSYQLSLFDSLLPGPVLNHFPLASITKEQVYAAAMAQPFQGRLLRDWAENIEADRMTRIINTVKN GYLAGDTVEQMARKVRGTRARNYQDGAIEAGRKNVTAVVKTAVTHMAAVARDKFADNNSNIIDAKQWLSTLDNKTSHDCI IRDRLKYTLEGKPIGHKIPYLQGPGRIHFCCRSMETLITKSWRELGIDIDEMDEGTRASMDGQVPAGTTYSEWLQRQSYR RQVQVLGETRARLMQDGGMRTDEFFTDKGEWITLQQLRDIDGRAFSDAGL >Mature_369_residues ATINERLRDEVIAHSLFQSRYGAGVARKMVKVLNESDAELSARLIVALDELNPNSVTVKRLESLLASVRQVNKQAVDAMY TSLSDELLDFAKHEVSYQLSLFDSLLPGPVLNHFPLASITKEQVYAAAMAQPFQGRLLRDWAENIEADRMTRIINTVKNG YLAGDTVEQMARKVRGTRARNYQDGAIEAGRKNVTAVVKTAVTHMAAVARDKFADNNSNIIDAKQWLSTLDNKTSHDCII RDRLKYTLEGKPIGHKIPYLQGPGRIHFCCRSMETLITKSWRELGIDIDEMDEGTRASMDGQVPAGTTYSEWLQRQSYRR QVQVLGETRARLMQDGGMRTDEFFTDKGEWITLQQLRDIDGRAFSDAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41658; Mature: 41527
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATINERLRDEVIAHSLFQSRYGAGVARKMVKVLNESDAELSARLIVALDELNPNSVTVK CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHEEEEEEECCCCCHHHHH RLESLLASVRQVNKQAVDAMYTSLSDELLDFAKHEVSYQLSLFDSLLPGPVLNHFPLASI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHH TKEQVYAAAMAQPFQGRLLRDWAENIEADRMTRIINTVKNGYLAGDTVEQMARKVRGTRA HHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC RNYQDGAIEAGRKNVTAVVKTAVTHMAAVARDKFADNNSNIIDAKQWLSTLDNKTSHDCI CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHCCCCCCCHH IRDRLKYTLEGKPIGHKIPYLQGPGRIHFCCRSMETLITKSWRELGIDIDEMDEGTRASM HHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC DGQVPAGTTYSEWLQRQSYRRQVQVLGETRARLMQDGGMRTDEFFTDKGEWITLQQLRDI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEHHHHHCC DGRAFSDAGL CCCCCCCCCC >Mature Secondary Structure ATINERLRDEVIAHSLFQSRYGAGVARKMVKVLNESDAELSARLIVALDELNPNSVTVK CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHEEEEEEECCCCCHHHHH RLESLLASVRQVNKQAVDAMYTSLSDELLDFAKHEVSYQLSLFDSLLPGPVLNHFPLASI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHH TKEQVYAAAMAQPFQGRLLRDWAENIEADRMTRIINTVKNGYLAGDTVEQMARKVRGTRA HHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC RNYQDGAIEAGRKNVTAVVKTAVTHMAAVARDKFADNNSNIIDAKQWLSTLDNKTSHDCI CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHCCCCCCCHH IRDRLKYTLEGKPIGHKIPYLQGPGRIHFCCRSMETLITKSWRELGIDIDEMDEGTRASM HHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC DGQVPAGTTYSEWLQRQSYRRQVQVLGETRARLMQDGGMRTDEFFTDKGEWITLQQLRDI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEHHHHHCC DGRAFSDAGL CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA