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The map label for this gene is ytfH [H]

Identifier: 218928782

GI number: 218928782

Start: 1872838

End: 1873221

Strand: Direct

Name: ytfH [H]

Synonym: YPO1646

Alternate gene names: 218928782

Gene position: 1872838-1873221 (Clockwise)

Preceding gene: 218928777

Following gene: 218928783

Centisome position: 40.24

GC content: 49.48

Gene sequence:

>384_bases
ATGAATGGCAACATTTCATTTCCGGAACAACTCAGGCGCGGTGAACTGCTTAATGTCGATTGCCCGTCAAGAGAGATACT
CAAGCGGGTGACTAGCCGCTGGGGGGTGTTGGTCTTGATCGCTTTGAGTAATGAAACACTGCGTTTTAGTGCATTGAGAC
GAAAGATTGGTGGGGTCAGTGAGAAAATGTTGGCACAAACGCTCCAGCATCTTGAAGAAGATGGTTTTATTGACAGGACT
GCTTATCCGGTAGTGCCACCTCACGTGGAATACAGCCTCACTCCGTTAGGAAAAGAGATCCAAGAGCAGGTGGAAGGGCT
GACGGTGTGGCTGGAGACAAACTTGCATCGGATTATGGAACAACGGCAGCAGCGGTCAGTATGA

Upstream 100 bases:

>100_bases
TATCTGCCCAAAATCATCCTTAAAGCCATCATATGCAATATACTCACTTTACGTAAGTACATACCAAAAGGTTAGTGTGA
GAGTGACAAAACTACAAAAT

Downstream 100 bases:

>100_bases
CCGTCGTGATTTATCGTCTTTGGCCTCATATTCTGGTTGTGCCAGCGCCAACAGAAGATGGCCAACCTGTTTTATAGCGC
GGTGCTTGAAGGGGGTACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MNGNISFPEQLRRGELLNVDCPSREILKRVTSRWGVLVLIALSNETLRFSALRRKIGGVSEKMLAQTLQHLEEDGFIDRT
AYPVVPPHVEYSLTPLGKEIQEQVEGLTVWLETNLHRIMEQRQQRSV

Sequences:

>Translated_127_residues
MNGNISFPEQLRRGELLNVDCPSREILKRVTSRWGVLVLIALSNETLRFSALRRKIGGVSEKMLAQTLQHLEEDGFIDRT
AYPVVPPHVEYSLTPLGKEIQEQVEGLTVWLETNLHRIMEQRQQRSV
>Mature_127_residues
MNGNISFPEQLRRGELLNVDCPSREILKRVTSRWGVLVLIALSNETLRFSALRRKIGGVSEKMLAQTLQHLEEDGFIDRT
AYPVVPPHVEYSLTPLGKEIQEQVEGLTVWLETNLHRIMEQRQQRSV

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=124, Percent_Identity=61.2903225806452, Blast_Score=164, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14607; Mature: 14607

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGNISFPEQLRRGELLNVDCPSREILKRVTSRWGVLVLIALSNETLRFSALRRKIGGVS
CCCCCCCHHHHCCCCEECCCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCC
EKMLAQTLQHLEEDGFIDRTAYPVVPPHVEYSLTPLGKEIQEQVEGLTVWLETNLHRIME
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
QRQQRSV
HHHHCCC
>Mature Secondary Structure
MNGNISFPEQLRRGELLNVDCPSREILKRVTSRWGVLVLIALSNETLRFSALRRKIGGVS
CCCCCCCHHHHCCCCEECCCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCC
EKMLAQTLQHLEEDGFIDRTAYPVVPPHVEYSLTPLGKEIQEQVEGLTVWLETNLHRIME
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
QRQQRSV
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]