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The map label for this gene is yadA [H]

Identifier: 218928535

GI number: 218928535

Start: 1565168

End: 1566262

Strand: Direct

Name: yadA [H]

Synonym: YPO1387

Alternate gene names: 218928535

Gene position: 1565168-1566262 (Clockwise)

Preceding gene: 218928534

Following gene: 218928536

Centisome position: 33.63

GC content: 40.55

Gene sequence:

>1095_bases
ATGTTTACAAAAAGTAATTTCAAAAAATCGGTTGTTATCATCACGGCAATTTTTTCTGGGTCTGTGTTTGCGGATGTCAA
TATCGGTGATTTCAATACGGGGGTTATTGGCAATGGAACTGCGGTAGGGAATAATAACTCGCTTGGCGGTTCAACAAATG
GTGTCGTTGTTGGCAACGGTGGCAGTTTATCCAACTCGATAAATGGCGTTGTCATTGGGAATGGCAGTGTTAGTGATGGG
GATGGAGTATCGGTAGGTGGCGGCACGTCAACGAATGGCGGAATTGCGATTGGTAGCGGCTCCAATGCAACACGATCTGA
TGAAATGAACATCGGTGATCGCCAAATAACCGGTGTTAAAGCGGGTGTCGCAGATACCGATGCGGCGAATGTCGGTCAAC
TGGTGGCTAAAGCTGGCGAGACACTTAATAGCGCTAATATATATGTGGATAACCAAGCGACCGAAACACTTAATAATGCG
AATATATACACAGATAACAAAGCGACTGAAACAATTAATAATGCCAATACATACACGGATAACAAATCATCCGAAACGCT
AAATTCAGCAAATAGCTACACTGATAATAAATCATCTGAAACATTGAATAGTGCAAATACTTATACTGACAGCAAAACTG
CTGAGATATTTAATACAACTAAAACATACATGGACGGGAAGTCGAAAGAAACACTAAATAACACCTATGACTATGTAGAT
AGTAAAGTTTCATCAATTGTTTATGATGTAAATAGCTATACGGATAAGACGGTAAATACAGCGTTTGAAACGTCATTATC
CGATGCTAAAAGTTATGTTGATGATAAATACAATCAACTTAGTGATAAAGTTAACAAAAATTTTAATAAGACTAATGCAG
GTATTTCTGGTGCAATGGCGATGTCAGGTATTCCTCAAAAATTCGGATATGAAAAATCGTTTGGGATGGCGATAGGGGCT
TATCGCGGGCAAAGTGCACTCGCTGTGGGAGGCGACTGGAACATCAATCATAAAACGATAACGCGAGTCAATGTTTCTGC
CGACACTGAAGGCGGTGTCGGTGTTGCAGCGGGTTTTGCTTTTGGCATTAATTAA

Upstream 100 bases:

>100_bases
GTTGTAATGGAATGGACGCCCCATTGAGTCGGTATCAATGTGTCAAAATATAATGGGGTGAAAATAATGCAAACCCTAAT
AGCATTTATGGATATTAAAC

Downstream 100 bases:

>100_bases
TGAATAAGGAAATTAAACGGATGCAACGGATGCAATGCATATATATCGCCACTTGGTTAATCGCAGTATTTACTTCGCCG
ATAGTGATAGCTAACAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MFTKSNFKKSVVIITAIFSGSVFADVNIGDFNTGVIGNGTAVGNNNSLGGSTNGVVVGNGGSLSNSINGVVIGNGSVSDG
DGVSVGGGTSTNGGIAIGSGSNATRSDEMNIGDRQITGVKAGVADTDAANVGQLVAKAGETLNSANIYVDNQATETLNNA
NIYTDNKATETINNANTYTDNKSSETLNSANSYTDNKSSETLNSANTYTDSKTAEIFNTTKTYMDGKSKETLNNTYDYVD
SKVSSIVYDVNSYTDKTVNTAFETSLSDAKSYVDDKYNQLSDKVNKNFNKTNAGISGAMAMSGIPQKFGYEKSFGMAIGA
YRGQSALAVGGDWNINHKTITRVNVSADTEGGVGVAAGFAFGIN

Sequences:

>Translated_364_residues
MFTKSNFKKSVVIITAIFSGSVFADVNIGDFNTGVIGNGTAVGNNNSLGGSTNGVVVGNGGSLSNSINGVVIGNGSVSDG
DGVSVGGGTSTNGGIAIGSGSNATRSDEMNIGDRQITGVKAGVADTDAANVGQLVAKAGETLNSANIYVDNQATETLNNA
NIYTDNKATETINNANTYTDNKSSETLNSANSYTDNKSSETLNSANTYTDSKTAEIFNTTKTYMDGKSKETLNNTYDYVD
SKVSSIVYDVNSYTDKTVNTAFETSLSDAKSYVDDKYNQLSDKVNKNFNKTNAGISGAMAMSGIPQKFGYEKSFGMAIGA
YRGQSALAVGGDWNINHKTITRVNVSADTEGGVGVAAGFAFGIN
>Mature_364_residues
MFTKSNFKKSVVIITAIFSGSVFADVNIGDFNTGVIGNGTAVGNNNSLGGSTNGVVVGNGGSLSNSINGVVIGNGSVSDG
DGVSVGGGTSTNGGIAIGSGSNATRSDEMNIGDRQITGVKAGVADTDAANVGQLVAKAGETLNSANIYVDNQATETLNNA
NIYTDNKATETINNANTYTDNKSSETLNSANSYTDNKSSETLNSANTYTDSKTAEIFNTTKTYMDGKSKETLNNTYDYVD
SKVSSIVYDVNSYTDKTVNTAFETSLSDAKSYVDDKYNQLSDKVNKNFNKTNAGISGAMAMSGIPQKFGYEKSFGMAIGA
YRGQSALAVGGDWNINHKTITRVNVSADTEGGVGVAAGFAFGIN

Specific function: Collagen-binding outer membrane protein forming a fibrillar matrix on the bacterial cell surface. Promotes initial attachment and invasion of eukaryotic cells. Also protects the bacteria by being responsible for agglutination, serum resistance, complement

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the autotransporter-2 (TC 1.B.40) / oligomeric coiled-coil adhesin (Oca) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008640
- InterPro:   IPR008635
- InterPro:   IPR008126
- InterPro:   IPR005594 [H]

Pfam domain/function: PF05658 Hep_Hag; PF05662 HIM; PF03895 YadA [H]

EC number: NA

Molecular weight: Translated: 37650; Mature: 37650

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTKSNFKKSVVIITAIFSGSVFADVNIGDFNTGVIGNGTAVGNNNSLGGSTNGVVVGNG
CCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCEECCCEEECCCCCCCCCCCCEEEECC
GSLSNSINGVVIGNGSVSDGDGVSVGGGTSTNGGIAIGSGSNATRSDEMNIGDRQITGVK
CCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEE
AGVADTDAANVGQLVAKAGETLNSANIYVDNQATETLNNANIYTDNKATETINNANTYTD
CCCCCCCHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCEEEECCCHHHHCCCCCCCCC
NKSSETLNSANSYTDNKSSETLNSANTYTDSKTAEIFNTTKTYMDGKSKETLNNTYDYVD
CCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SKVSSIVYDVNSYTDKTVNTAFETSLSDAKSYVDDKYNQLSDKVNKNFNKTNAGISGAMA
HHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
MSGIPQKFGYEKSFGMAIGAYRGQSALAVGGDWNINHKTITRVNVSADTEGGVGVAAGFA
HCCCCHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCCEEEEEEE
FGIN
ECCC
>Mature Secondary Structure
MFTKSNFKKSVVIITAIFSGSVFADVNIGDFNTGVIGNGTAVGNNNSLGGSTNGVVVGNG
CCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCEECCCEEECCCCCCCCCCCCEEEECC
GSLSNSINGVVIGNGSVSDGDGVSVGGGTSTNGGIAIGSGSNATRSDEMNIGDRQITGVK
CCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEE
AGVADTDAANVGQLVAKAGETLNSANIYVDNQATETLNNANIYTDNKATETINNANTYTD
CCCCCCCHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCEEEECCCHHHHCCCCCCCCC
NKSSETLNSANSYTDNKSSETLNSANTYTDSKTAEIFNTTKTYMDGKSKETLNNTYDYVD
CCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SKVSSIVYDVNSYTDKTVNTAFETSLSDAKSYVDDKYNQLSDKVNKNFNKTNAGISGAMA
HHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
MSGIPQKFGYEKSFGMAIGAYRGQSALAVGGDWNINHKTITRVNVSADTEGGVGVAAGFA
HCCCCHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCCEEEEEEE
FGIN
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2761389; 7934875; 2592347; 1548243 [H]