BacMap

Definition	Yersinia pestis CO92 chromosome, complete genome.
Accession	NC_003143
Length	4,653,728

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The map label for this gene is gabD [H]

Identifier: 218928441

GI number: 218928441

Start: 1448444

End: 1449940

Strand: Direct

Name: gabD [H]

Synonym: YPO1290

Alternate gene names: 218928441

Gene position: 1448444-1449940 (Clockwise)

Preceding gene: 218928437

Following gene: 218928442

Centisome position: 31.12

GC content: 56.98

Gene sequence:

>1497_bases
ATGAGTGAGTATCATGAAAAAAATAATGCACTCTTCAAGTCGATTACCGCGTTAGACGGCGCTTTATTTATCAATGGTGA
GTTCCGCAAAGGCGCGGGGGGGCGTCTGCCAGTGGAAAACCCGGCTACCGGCAAAGTGATCGGTCATCTCGCGGCGGCTA
CTCCAGAGGAGATCGAAGAGGCGGTTGCTGCGGCGCGTCGCGCTTTTCCTGCCTGGGCCGCCGAACGGCCAAAGGCCCGA
GCGAATGCGTTGCACCGTTTGGGTGATTTGATCGCCGGCGATGCCCTGAATATGGCGCGGAACATGACCATCGAACAGGG
CAAGCCGGTTAACGAAGCGCAAGGTGAAATACTGAAGCTCGCCGAAATTTGTCATTTTTATGGCGAAGAAGCGACTCGCG
TGCAAGGTGACGTTGTGCCGAATGACCCTCCGGGTTTTCAAAGTCTTGTCGTGCGAGAACCGGTTGGGGTGGTGGGGGCG
ATTACCCCTTGGAATTACCCGGCCGAACTGGTGGGATGGAAGCTGTGCGCCAGCCTTGCCGCAGGCTGTACCCTCATTAT
CAAACCTGCTGAACTGACACCCTACACGGCGCTGGCCATCGCTGAAAAATGCCTTGAAGCGGGTATTCCTGCCGGTGTCG
TCAATGTGTTGACGGGGAAGGGGGAACAGGTTGGGCAGGCGCTGGTTGAACATCCACAGGTCGATAAAATAGCCTTTACT
GGTTCCAGCGCGGTCGGTTTGCATATCCAGCAAAGTTGCCCGCAGGTTAAGCGGTTGTCGCTCGAACTCGGCGGCAATGG
TCCGATGGTGGTGACCGCCTGCGCAGATGTGGCTGCCGCAGTTAAGGGCGCGGTGCGTCGTAGCTTCCGCAACTGTGGGC
AGGTCTGCATTGCGATCAATCGTATTTATGTCCACCGCTCATGCTATCGGGCGTTTGTGAGCAAAATGGGGGTGGCCACC
AATGGGTTGCGCCTTGGCAATGGGTTGGACGATCCAGCGGCGGACTTGGGTGCGATGGCCTCTGTAGAGCCACTGAACAA
AACGCGTGCGCACCTTGAGGATGCTCTGGCAAAGGGGGCGCGCTTGGTTGCGGGGGGGAAAGCACCAGAGGGGGTGGAAT
ATGCCAAGGGCCATTTCTTCCGTCCGACTGTGCTGGCCGACTGCACACACCAAATGCGCGTCATGACCGAAGAGACGTTT
GGCCCGCTGGTCGGCTTAGCCCCTTTCGATGATATCGATGAAGTGATTAGTCGAGCGAATGATACTCCCTATGGGCTGGC
AGCTTACGTTTATGCACGAGATCTGGCGGCTATCCACCGGCTGTCAGCGGCGTTGGACTACGGCAATGTGGCAATCAATA
ACGTCGATGCCAGCATGATGAATGCGCCCTATGGGGGGCGTAAGCAAAGTGGTGTGGGCTACGAGCATGGCCGTGAGGGG
TTGCTGGAGTATTTCAATTTCAAGCACATCCGCTTGTACCACGGTATCGGGGACTAA

Upstream 100 bases:

>100_bases
GTTTTTTTTGAATAGGGGATCGCGTAAAACTAGATGAGTTATGATCCGCATCGGGCTAAACCACGGGCTCAACTGCAGAT
GAAGGCGACGGAGACGCAAC

Downstream 100 bases:

>100_bases
ACCATGCAGGCGCTTTTGGGCATTGATATCGGCACCTCGGGGTGTAAGGCGTTGCTGATCGGTATCGATGGTGCGGTGAT
CGCCGCCGATACCGCGAGTT

Product: putative aldehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MSEYHEKNNALFKSITALDGALFINGEFRKGAGGRLPVENPATGKVIGHLAAATPEEIEEAVAAARRAFPAWAAERPKAR
ANALHRLGDLIAGDALNMARNMTIEQGKPVNEAQGEILKLAEICHFYGEEATRVQGDVVPNDPPGFQSLVVREPVGVVGA
ITPWNYPAELVGWKLCASLAAGCTLIIKPAELTPYTALAIAEKCLEAGIPAGVVNVLTGKGEQVGQALVEHPQVDKIAFT
GSSAVGLHIQQSCPQVKRLSLELGGNGPMVVTACADVAAAVKGAVRRSFRNCGQVCIAINRIYVHRSCYRAFVSKMGVAT
NGLRLGNGLDDPAADLGAMASVEPLNKTRAHLEDALAKGARLVAGGKAPEGVEYAKGHFFRPTVLADCTHQMRVMTEETF
GPLVGLAPFDDIDEVISRANDTPYGLAAYVYARDLAAIHRLSAALDYGNVAINNVDASMMNAPYGGRKQSGVGYEHGREG
LLEYFNFKHIRLYHGIGD

Sequences:

>Translated_498_residues
MSEYHEKNNALFKSITALDGALFINGEFRKGAGGRLPVENPATGKVIGHLAAATPEEIEEAVAAARRAFPAWAAERPKAR
ANALHRLGDLIAGDALNMARNMTIEQGKPVNEAQGEILKLAEICHFYGEEATRVQGDVVPNDPPGFQSLVVREPVGVVGA
ITPWNYPAELVGWKLCASLAAGCTLIIKPAELTPYTALAIAEKCLEAGIPAGVVNVLTGKGEQVGQALVEHPQVDKIAFT
GSSAVGLHIQQSCPQVKRLSLELGGNGPMVVTACADVAAAVKGAVRRSFRNCGQVCIAINRIYVHRSCYRAFVSKMGVAT
NGLRLGNGLDDPAADLGAMASVEPLNKTRAHLEDALAKGARLVAGGKAPEGVEYAKGHFFRPTVLADCTHQMRVMTEETF
GPLVGLAPFDDIDEVISRANDTPYGLAAYVYARDLAAIHRLSAALDYGNVAINNVDASMMNAPYGGRKQSGVGYEHGREG
LLEYFNFKHIRLYHGIGD
>Mature_497_residues
SEYHEKNNALFKSITALDGALFINGEFRKGAGGRLPVENPATGKVIGHLAAATPEEIEEAVAAARRAFPAWAAERPKARA
NALHRLGDLIAGDALNMARNMTIEQGKPVNEAQGEILKLAEICHFYGEEATRVQGDVVPNDPPGFQSLVVREPVGVVGAI
TPWNYPAELVGWKLCASLAAGCTLIIKPAELTPYTALAIAEKCLEAGIPAGVVNVLTGKGEQVGQALVEHPQVDKIAFTG
SSAVGLHIQQSCPQVKRLSLELGGNGPMVVTACADVAAAVKGAVRRSFRNCGQVCIAINRIYVHRSCYRAFVSKMGVATN
GLRLGNGLDDPAADLGAMASVEPLNKTRAHLEDALAKGARLVAGGKAPEGVEYAKGHFFRPTVLADCTHQMRVMTEETFG
PLVGLAPFDDIDEVISRANDTPYGLAAYVYARDLAAIHRLSAALDYGNVAINNVDASMMNAPYGGRKQSGVGYEHGREGL
LEYFNFKHIRLYHGIGD

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI12007648, Length=481, Percent_Identity=36.5904365904366, Blast_Score=311, Evalue=7e-85,
Organism=Homo sapiens, GI4507229, Length=491, Percent_Identity=38.6965376782077, Blast_Score=308, Evalue=9e-84,
Organism=Homo sapiens, GI25777730, Length=478, Percent_Identity=36.8200836820084, Blast_Score=300, Evalue=2e-81,
Organism=Homo sapiens, GI25777721, Length=504, Percent_Identity=37.6984126984127, Blast_Score=299, Evalue=4e-81,
Organism=Homo sapiens, GI25777724, Length=478, Percent_Identity=37.2384937238494, Blast_Score=293, Evalue=3e-79,
Organism=Homo sapiens, GI153266822, Length=485, Percent_Identity=36.9072164948454, Blast_Score=292, Evalue=4e-79,
Organism=Homo sapiens, GI21361176, Length=478, Percent_Identity=37.0292887029289, Blast_Score=290, Evalue=3e-78,
Organism=Homo sapiens, GI25777732, Length=478, Percent_Identity=36.8200836820084, Blast_Score=286, Evalue=4e-77,
Organism=Homo sapiens, GI21614513, Length=497, Percent_Identity=37.2233400402414, Blast_Score=284, Evalue=1e-76,
Organism=Homo sapiens, GI238814322, Length=483, Percent_Identity=34.9896480331263, Blast_Score=273, Evalue=3e-73,
Organism=Homo sapiens, GI115387104, Length=458, Percent_Identity=34.2794759825328, Blast_Score=265, Evalue=9e-71,
Organism=Homo sapiens, GI25777728, Length=416, Percent_Identity=37.2596153846154, Blast_Score=260, Evalue=2e-69,
Organism=Homo sapiens, GI25952152, Length=481, Percent_Identity=33.8877338877339, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI25777726, Length=476, Percent_Identity=33.4033613445378, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI11095441, Length=474, Percent_Identity=27.0042194092827, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI301500698, Length=288, Percent_Identity=37.8472222222222, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI188035924, Length=473, Percent_Identity=26.6384778012685, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI310128103, Length=473, Percent_Identity=26.8498942917548, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI310128093, Length=472, Percent_Identity=26.6949152542373, Blast_Score=175, Evalue=9e-44,
Organism=Homo sapiens, GI310128091, Length=472, Percent_Identity=26.271186440678, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI223972651, Length=469, Percent_Identity=27.9317697228145, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI4557303, Length=342, Percent_Identity=29.8245614035088, Blast_Score=140, Evalue=4e-33,
Organism=Homo sapiens, GI73466520, Length=342, Percent_Identity=29.8245614035088, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI238859541, Length=455, Percent_Identity=26.5934065934066, Blast_Score=133, Evalue=5e-31,
Organism=Homo sapiens, GI25777736, Length=455, Percent_Identity=26.5934065934066, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI25777734, Length=455, Percent_Identity=26.5934065934066, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI206597441, Length=443, Percent_Identity=26.6365688487585, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI206597439, Length=443, Percent_Identity=26.6365688487585, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI22907049, Length=443, Percent_Identity=26.6365688487585, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI73695881, Length=348, Percent_Identity=28.448275862069, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI73695879, Length=348, Percent_Identity=28.448275862069, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI71773324, Length=349, Percent_Identity=28.080229226361, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI4502043, Length=349, Percent_Identity=28.080229226361, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI238814371, Length=349, Percent_Identity=28.080229226361, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI310128089, Length=333, Percent_Identity=26.7267267267267, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI223972653, Length=470, Percent_Identity=26.1702127659574, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI310128087, Length=291, Percent_Identity=27.4914089347079, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI310128095, Length=316, Percent_Identity=26.8987341772152, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI310128097, Length=264, Percent_Identity=26.8939393939394, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI310128101, Length=242, Percent_Identity=27.2727272727273, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI310128099, Length=230, Percent_Identity=26.9565217391304, Blast_Score=91, Evalue=3e-18,
Organism=Escherichia coli, GI1789015, Length=470, Percent_Identity=43.4042553191489, Blast_Score=386, Evalue=1e-108,
Organism=Escherichia coli, GI1787715, Length=476, Percent_Identity=37.3949579831933, Blast_Score=303, Evalue=1e-83,
Organism=Escherichia coli, GI1787684, Length=473, Percent_Identity=34.0380549682875, Blast_Score=283, Evalue=2e-77,
Organism=Escherichia coli, GI87081896, Length=502, Percent_Identity=35.4581673306773, Blast_Score=281, Evalue=5e-77,
Organism=Escherichia coli, GI1786504, Length=475, Percent_Identity=34.9473684210526, Blast_Score=274, Evalue=1e-74,
Organism=Escherichia coli, GI1787558, Length=483, Percent_Identity=34.1614906832298, Blast_Score=262, Evalue=4e-71,
Organism=Escherichia coli, GI87082295, Length=473, Percent_Identity=32.9809725158562, Blast_Score=218, Evalue=7e-58,
Organism=Escherichia coli, GI87081926, Length=455, Percent_Identity=32.5274725274725, Blast_Score=217, Evalue=1e-57,
Organism=Escherichia coli, GI1788042, Length=454, Percent_Identity=30.6167400881057, Blast_Score=182, Evalue=4e-47,
Organism=Escherichia coli, GI1787250, Length=460, Percent_Identity=28.695652173913, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1787653, Length=326, Percent_Identity=26.3803680981595, Blast_Score=65, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI133930964, Length=483, Percent_Identity=37.888198757764, Blast_Score=311, Evalue=7e-85,
Organism=Caenorhabditis elegans, GI17534119, Length=472, Percent_Identity=37.5, Blast_Score=292, Evalue=3e-79,
Organism=Caenorhabditis elegans, GI17562198, Length=494, Percent_Identity=35.2226720647773, Blast_Score=276, Evalue=1e-74,
Organism=Caenorhabditis elegans, GI25143876, Length=465, Percent_Identity=35.0537634408602, Blast_Score=269, Evalue=2e-72,
Organism=Caenorhabditis elegans, GI25143874, Length=465, Percent_Identity=35.0537634408602, Blast_Score=269, Evalue=3e-72,
Organism=Caenorhabditis elegans, GI25144435, Length=478, Percent_Identity=35.5648535564854, Blast_Score=268, Evalue=4e-72,
Organism=Caenorhabditis elegans, GI17551164, Length=476, Percent_Identity=33.8235294117647, Blast_Score=252, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI71995606, Length=483, Percent_Identity=34.9896480331263, Blast_Score=248, Evalue=4e-66,
Organism=Caenorhabditis elegans, GI32564736, Length=416, Percent_Identity=36.0576923076923, Blast_Score=242, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI71995613, Length=432, Percent_Identity=34.2592592592593, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI115534176, Length=456, Percent_Identity=28.2894736842105, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI71986308, Length=477, Percent_Identity=27.0440251572327, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17534447, Length=451, Percent_Identity=27.9379157427938, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI32564151, Length=412, Percent_Identity=28.3980582524272, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17564084, Length=442, Percent_Identity=27.3755656108597, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI32566756, Length=348, Percent_Identity=27.5862068965517, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI25146394, Length=339, Percent_Identity=28.023598820059, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI25146391, Length=339, Percent_Identity=28.023598820059, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI115532534, Length=406, Percent_Identity=26.3546798029557, Blast_Score=121, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71990744, Length=292, Percent_Identity=27.3972602739726, Blast_Score=86, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6320917, Length=474, Percent_Identity=39.662447257384, Blast_Score=330, Evalue=4e-91,
Organism=Saccharomyces cerevisiae, GI6319478, Length=474, Percent_Identity=36.0759493670886, Blast_Score=303, Evalue=5e-83,
Organism=Saccharomyces cerevisiae, GI6324950, Length=474, Percent_Identity=35.2320675105485, Blast_Score=301, Evalue=1e-82,
Organism=Saccharomyces cerevisiae, GI6325196, Length=477, Percent_Identity=33.1236897274633, Blast_Score=273, Evalue=4e-74,
Organism=Saccharomyces cerevisiae, GI6323822, Length=487, Percent_Identity=34.7022587268994, Blast_Score=268, Evalue=2e-72,
Organism=Saccharomyces cerevisiae, GI6323821, Length=480, Percent_Identity=33.75, Blast_Score=261, Evalue=2e-70,
Organism=Saccharomyces cerevisiae, GI6321828, Length=474, Percent_Identity=29.535864978903, Blast_Score=194, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6321826, Length=513, Percent_Identity=26.3157894736842, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6323757, Length=390, Percent_Identity=25.3846153846154, Blast_Score=105, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281362580, Length=488, Percent_Identity=37.7049180327869, Blast_Score=335, Evalue=5e-92,
Organism=Drosophila melanogaster, GI62472918, Length=488, Percent_Identity=37.7049180327869, Blast_Score=335, Evalue=5e-92,
Organism=Drosophila melanogaster, GI62472926, Length=488, Percent_Identity=37.7049180327869, Blast_Score=335, Evalue=5e-92,
Organism=Drosophila melanogaster, GI62472936, Length=488, Percent_Identity=37.7049180327869, Blast_Score=335, Evalue=5e-92,
Organism=Drosophila melanogaster, GI21356737, Length=488, Percent_Identity=37.7049180327869, Blast_Score=335, Evalue=5e-92,
Organism=Drosophila melanogaster, GI24650465, Length=477, Percent_Identity=38.7840670859539, Blast_Score=311, Evalue=7e-85,
Organism=Drosophila melanogaster, GI20129399, Length=476, Percent_Identity=38.2352941176471, Blast_Score=293, Evalue=3e-79,
Organism=Drosophila melanogaster, GI24585660, Length=484, Percent_Identity=35.1239669421488, Blast_Score=292, Evalue=4e-79,
Organism=Drosophila melanogaster, GI24638878, Length=475, Percent_Identity=26.3157894736842, Blast_Score=184, Evalue=9e-47,
Organism=Drosophila melanogaster, GI24638876, Length=475, Percent_Identity=26.3157894736842, Blast_Score=184, Evalue=9e-47,
Organism=Drosophila melanogaster, GI24666674, Length=478, Percent_Identity=25.5230125523013, Blast_Score=162, Evalue=5e-40,
Organism=Drosophila melanogaster, GI24668425, Length=445, Percent_Identity=26.0674157303371, Blast_Score=121, Evalue=9e-28,
Organism=Drosophila melanogaster, GI24668417, Length=445, Percent_Identity=26.0674157303371, Blast_Score=121, Evalue=9e-28,
Organism=Drosophila melanogaster, GI24668413, Length=445, Percent_Identity=26.0674157303371, Blast_Score=121, Evalue=9e-28,
Organism=Drosophila melanogaster, GI281360303, Length=350, Percent_Identity=27.4285714285714, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI45552499, Length=350, Percent_Identity=27.4285714285714, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281360301, Length=349, Percent_Identity=27.7936962750716, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI281360299, Length=349, Percent_Identity=27.5071633237822, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI281360297, Length=349, Percent_Identity=27.5071633237822, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI281360295, Length=349, Percent_Identity=27.5071633237822, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24586250, Length=349, Percent_Identity=27.5071633237822, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI28574525, Length=459, Percent_Identity=23.0936819172113, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28571798, Length=455, Percent_Identity=22.8571428571429, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28571796, Length=455, Percent_Identity=22.8571428571429, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28571794, Length=455, Percent_Identity=22.8571428571429, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28571802, Length=455, Percent_Identity=22.8571428571429, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28571800, Length=455, Percent_Identity=22.8571428571429, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28571806, Length=455, Percent_Identity=22.8571428571429, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281360293, Length=162, Percent_Identity=32.0987654320988, Blast_Score=73, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 52983; Mature: 52852

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEYHEKNNALFKSITALDGALFINGEFRKGAGGRLPVENPATGKVIGHLAAATPEEIEE
CCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHH
AVAAARRAFPAWAAERPKARANALHRLGDLIAGDALNMARNMTIEQGKPVNEAQGEILKL
HHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHH
AEICHFYGEEATRVQGDVVPNDPPGFQSLVVREPVGVVGAITPWNYPAELVGWKLCASLA
HHHHHHHCCCHHEEECCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHH
AGCTLIIKPAELTPYTALAIAEKCLEAGIPAGVVNVLTGKGEQVGQALVEHPQVDKIAFT
CCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCEEEEC
GSSAVGLHIQQSCPQVKRLSLELGGNGPMVVTACADVAAAVKGAVRRSFRNCGQVCIAIN
CCCCEEEEEHHHCCHHHEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIYVHRSCYRAFVSKMGVATNGLRLGNGLDDPAADLGAMASVEPLNKTRAHLEDALAKGA
HHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC
RLVAGGKAPEGVEYAKGHFFRPTVLADCTHQMRVMTEETFGPLVGLAPFDDIDEVISRAN
EEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHCC
DTPYGLAAYVYARDLAAIHRLSAALDYGNVAINNVDASMMNAPYGGRKQSGVGYEHGREG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCCCHHHHHHH
LLEYFNFKHIRLYHGIGD
HHHHHCCCEEEEECCCCC
>Mature Secondary Structure 
SEYHEKNNALFKSITALDGALFINGEFRKGAGGRLPVENPATGKVIGHLAAATPEEIEE
CCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHH
AVAAARRAFPAWAAERPKARANALHRLGDLIAGDALNMARNMTIEQGKPVNEAQGEILKL
HHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHH
AEICHFYGEEATRVQGDVVPNDPPGFQSLVVREPVGVVGAITPWNYPAELVGWKLCASLA
HHHHHHHCCCHHEEECCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHH
AGCTLIIKPAELTPYTALAIAEKCLEAGIPAGVVNVLTGKGEQVGQALVEHPQVDKIAFT
CCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCEEEEC
GSSAVGLHIQQSCPQVKRLSLELGGNGPMVVTACADVAAAVKGAVRRSFRNCGQVCIAIN
CCCCEEEEEHHHCCHHHEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIYVHRSCYRAFVSKMGVATNGLRLGNGLDDPAADLGAMASVEPLNKTRAHLEDALAKGA
HHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC
RLVAGGKAPEGVEYAKGHFFRPTVLADCTHQMRVMTEETFGPLVGLAPFDDIDEVISRAN
EEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHCC
DTPYGLAAYVYARDLAAIHRLSAALDYGNVAINNVDASMMNAPYGGRKQSGVGYEHGREG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCCCHHHHHHH
LLEYFNFKHIRLYHGIGD
HHHHHCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]