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The map label for this gene is tbpA [H]

Identifier: 218927721

GI number: 218927721

Start: 565994

End: 566986

Strand: Reverse

Name: tbpA [H]

Synonym: YPO0522

Alternate gene names: 218927721

Gene position: 566986-565994 (Counterclockwise)

Preceding gene: 218927723

Following gene: 218927720

Centisome position: 12.18

GC content: 49.85

Gene sequence:

>993_bases
GTGTTTAAACACATTATTTCCTGCTTATTACTGATATCAGCCACCTCCGCGCTTGCCGCAGAAAAACCTACGCTGACGGT
CTATACCTACGACTCCTTTGCTGCTGACTGGGGCCCAGGCCCGGCGATTAAGCAGGCCTTTGAAGCTGAATGCGATTGCC
AGCTAAAATTTGTGGCACTGGAAGATGGCGTTTCACTGCTGAACCGCCTGCGGATGGAAGGTAAAAACAGCCAGGCCGAT
GTGATTTTAGGGTTGGATAACAATCTGGTACAGGCGGCAGAACAAACCGGCTTGTTTACCCCAAGCCAGGTTGATACCCG
TAACCTGACCCTACCAGAGCCGTGGCAGAATAAGACATTTGTCCCTTACGATTATGGCTATTTTGCTTTTGTGTATAACA
AAGAAAAACTGAAAAACCCGCCAAAAAGCCTGCACGAATTAATCAGCAGTAAAGAACCGTGGAAAGTGATTTATCAAGAC
CCACGTACCAGCACTCCAGGTCTGGGTCTGATGCTGTGGATGCAAAAAGTTTATGGCGATCAAGCCCCGCAAGCATGGCA
ACAACTGGCGCAGAAAACGGTCACAGTCACCAAAGGCTGGAGCGAGGCGTATGGCTTGTTCCTCAAGGGGGAAGCGGATT
TAGTGCTGAGCTACACCACCTCTCCGGCTTATCATTTAATTGCAGAAAAGAATAACAACTATGCAGCCGCCGATTTCAGT
GAAGGCCACTATTTACAAGTAGAAGTCGCCGGCCAACTGGCCGCCAGCAAACAACCTGAACTGGCGCAGCGCTTTATGCA
ATTTATCGTGACCCCTGCGTTCCAAAACCACATTCCAACCGGCAACTGGATGTATCCAGTGATCAAAATGGATCTACCCG
CCGGGTTCGAGACACTGGCCGTGCCACAAACAGCGTTGCAATTTGATGCTAAAGACGTGGCGGATAACCGCAGTAAATGG
ATTCAGGCATGGCAATCCGCCGTCAGCCGTTAA

Upstream 100 bases:

>100_bases
GCGGAGGGATTTGAGAATGATAACGACTGTATCATCACGGATACCAATGTTAACTACCGCCTCAGATACCTTTGCCACCT
TTATGTTCAAGGAGTGCAAA

Downstream 100 bases:

>100_bases
TCGCGCCCTGGCTATGGCCGGGGTTGCTGGCCGCTGGGCTGATTGTCGCGGTCGCCTTATTGGCGTTCGCCGCTATTTGG
CACCATGCGCCCACAGCAGA

Product: thiamine transporter substrate binding subunit

Products: ADP; phosphate; thiamine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MFKHIISCLLLISATSALAAEKPTLTVYTYDSFAADWGPGPAIKQAFEAECDCQLKFVALEDGVSLLNRLRMEGKNSQAD
VILGLDNNLVQAAEQTGLFTPSQVDTRNLTLPEPWQNKTFVPYDYGYFAFVYNKEKLKNPPKSLHELISSKEPWKVIYQD
PRTSTPGLGLMLWMQKVYGDQAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNYAAADFS
EGHYLQVEVAGQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPAGFETLAVPQTALQFDAKDVADNRSKW
IQAWQSAVSR

Sequences:

>Translated_330_residues
MFKHIISCLLLISATSALAAEKPTLTVYTYDSFAADWGPGPAIKQAFEAECDCQLKFVALEDGVSLLNRLRMEGKNSQAD
VILGLDNNLVQAAEQTGLFTPSQVDTRNLTLPEPWQNKTFVPYDYGYFAFVYNKEKLKNPPKSLHELISSKEPWKVIYQD
PRTSTPGLGLMLWMQKVYGDQAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNYAAADFS
EGHYLQVEVAGQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPAGFETLAVPQTALQFDAKDVADNRSKW
IQAWQSAVSR
>Mature_330_residues
MFKHIISCLLLISATSALAAEKPTLTVYTYDSFAADWGPGPAIKQAFEAECDCQLKFVALEDGVSLLNRLRMEGKNSQAD
VILGLDNNLVQAAEQTGLFTPSQVDTRNLTLPEPWQNKTFVPYDYGYFAFVYNKEKLKNPPKSLHELISSKEPWKVIYQD
PRTSTPGLGLMLWMQKVYGDQAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNYAAADFS
EGHYLQVEVAGQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPAGFETLAVPQTALQFDAKDVADNRSKW
IQAWQSAVSR

Specific function: Part of the ABC transporter complex thiBPQ involved in thiamine import [H]

COG id: COG4143

COG function: function code H; ABC-type thiamine transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1786255, Length=309, Percent_Identity=74.4336569579288, Blast_Score=494, Evalue=1e-141,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061
- InterPro:   IPR005948
- InterPro:   IPR005967 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 36929; Mature: 36929

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKHIISCLLLISATSALAAEKPTLTVYTYDSFAADWGPGPAIKQAFEAECDCQLKFVAL
CHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEE
EDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFTPSQVDTRNLTLPEPWQNKTF
HHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE
VPYDYGYFAFVYNKEKLKNPPKSLHELISSKEPWKVIYQDPRTSTPGLGLMLWMQKVYGD
EEECCCEEEEEEEHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC
QAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNYAAADFS
CCHHHHHHHHHHHEEEECCCHHHCCEEEECCCCEEEEEECCCEEEEEEECCCCEEEEECC
EGHYLQVEVAGQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPAGFETLA
CCCEEEEEECCCHHCCCCHHHHHHHHHHHHCHHHHCCCCCCCEEEEEEEEECCCCCHHHC
VPQTALQFDAKDVADNRSKWIQAWQSAVSR
CCHHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFKHIISCLLLISATSALAAEKPTLTVYTYDSFAADWGPGPAIKQAFEAECDCQLKFVAL
CHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEE
EDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFTPSQVDTRNLTLPEPWQNKTF
HHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE
VPYDYGYFAFVYNKEKLKNPPKSLHELISSKEPWKVIYQDPRTSTPGLGLMLWMQKVYGD
EEECCCEEEEEEEHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC
QAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNYAAADFS
CCHHHHHHHHHHHEEEECCCHHHCCEEEECCCCEEEEEECCCEEEEEEECCCCEEEEECC
EGHYLQVEVAGQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPAGFETLA
CCCEEEEEECCCHHCCCCHHHHHHHHHHHHCHHHHCCCCCCCEEEEEEEEECCCCCHHHC
VPQTALQFDAKDVADNRSKWIQAWQSAVSR
CCHHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; thiamine [Periplasm]; H2O [C]

Specific reaction: ATP + thiamine [Periplasm] + H2O = ADP + phosphate + thiamine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503; 9535878 [H]