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The map label for this gene is 15922884

Identifier: 15922884

GI number: 15922884

Start: 2560256

End: 2560861

Strand: Direct

Name: 15922884

Synonym: ST2550

Alternate gene names: NA

Gene position: 2560256-2560861 (Clockwise)

Preceding gene: 15922883

Following gene: 15922885

Centisome position: 95.01

GC content: 25.58

Gene sequence:

>606_bases
ATGAAGAAACTATACAAGATTAACTTTTCAATATTACATGAAGGTTGCTGGACCAGTAACGTTAAGGATAAGGTAGTTAC
ATTGAATATCTCAAAATACAATAATAATAAGATAAAAGTTAGTATAATATCGCCTCGACTACTAATAAAAGATCTAGAGA
AATCCGAAAATGTATATGATATATTAAAATATAGGAAGATTAAGGGAGGTTATGTTATTGATTTTCTTGAGGAAACAAAT
AGTACTATATCCGGGTATTTATTATCTGATGATAACATCTTATATCACAAAAATATTGTAAGACAGAAATTAGAAAAATG
GGAAATAATATCGCTAAGTAAATCTGTTACTAATAAATTAACTGAAAAATTTAATATTAATACTATTTCAATTAATGAAA
TAAAACCCTCAGATATATTATATTATGGTCTAACTGAAAAGGAATTATTAGTTCTCAAAAACGCGATTTCTATGGGCTAT
TTTAATTATCCTAGAGCAGTAAAGGCTAATGATATAGCTAAAAAATTAGGAATAAGCAAACAAGATTTCCTTTATCATTT
AAGAAATTCAATTAATAAACTAGTCTCCTCAATTGATTTCGATTAA

Upstream 100 bases:

>100_bases
TTTCAAAAATACGTGATATGAGAAGAAGGATAAAATTAAAAAATTTTTAAGAAGTAAGTAAAAAAGTTTATTAATTGGAA
TTGGCTAATAACCCGTTAGA

Downstream 100 bases:

>100_bases
CTTTTCGAAAACTATTTATTACCTCTTATACTTAAATAACGTCGTATATAGCAAATGACAAATAACTAATATTCTTATAA
ACTTTTCTTTTAACCCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Bacterio-Opsin Activator; HTH Domain-Containing Protein

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MKKLYKINFSILHEGCWTSNVKDKVVTLNISKYNNNKIKVSIISPRLLIKDLEKSENVYDILKYRKIKGGYVIDFLEETN
STISGYLLSDDNILYHKNIVRQKLEKWEIISLSKSVTNKLTEKFNINTISINEIKPSDILYYGLTEKELLVLKNAISMGY
FNYPRAVKANDIAKKLGISKQDFLYHLRNSINKLVSSIDFD

Sequences:

>Translated_201_residues
MKKLYKINFSILHEGCWTSNVKDKVVTLNISKYNNNKIKVSIISPRLLIKDLEKSENVYDILKYRKIKGGYVIDFLEETN
STISGYLLSDDNILYHKNIVRQKLEKWEIISLSKSVTNKLTEKFNINTISINEIKPSDILYYGLTEKELLVLKNAISMGY
FNYPRAVKANDIAKKLGISKQDFLYHLRNSINKLVSSIDFD
>Mature_201_residues
MKKLYKINFSILHEGCWTSNVKDKVVTLNISKYNNNKIKVSIISPRLLIKDLEKSENVYDILKYRKIKGGYVIDFLEETN
STISGYLLSDDNILYHKNIVRQKLEKWEIISLSKSVTNKLTEKFNINTISINEIKPSDILYYGLTEKELLVLKNAISMGY
FNYPRAVKANDIAKKLGISKQDFLYHLRNSINKLVSSIDFD

Specific function: Unknown

COG id: COG3413

COG function: function code R; Predicted DNA binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23321; Mature: 23321

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLYKINFSILHEGCWTSNVKDKVVTLNISKYNNNKIKVSIISPRLLIKDLEKSENVYD
CCCEEEEEHEEEECCCCCCCCCCEEEEEEEEEECCCEEEEEEECCHHHHHHHHCCCCHHH
ILKYRKIKGGYVIDFLEETNSTISGYLLSDDNILYHKNIVRQKLEKWEIISLSKSVTNKL
HHHHHCCCCCEEEEEEHHCCCEEEEEEECCCCEEEHHHHHHHHHHHHHEEEHHHHHHHHH
TEKFNINTISINEIKPSDILYYGLTEKELLVLKNAISMGYFNYPRAVKANDIAKKLGISK
HHHCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCH
QDFLYHLRNSINKLVSSIDFD
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKLYKINFSILHEGCWTSNVKDKVVTLNISKYNNNKIKVSIISPRLLIKDLEKSENVYD
CCCEEEEEHEEEECCCCCCCCCCEEEEEEEEEECCCEEEEEEECCHHHHHHHHCCCCHHH
ILKYRKIKGGYVIDFLEETNSTISGYLLSDDNILYHKNIVRQKLEKWEIISLSKSVTNKL
HHHHHCCCCCEEEEEEHHCCCEEEEEEECCCCEEEHHHHHHHHHHHHHEEEHHHHHHHHH
TEKFNINTISINEIKPSDILYYGLTEKELLVLKNAISMGYFNYPRAVKANDIAKKLGISK
HHHCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCH
QDFLYHLRNSINKLVSSIDFD
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA