Click here to switch to the map view.

The map label for this gene is 15922569

Identifier: 15922569

GI number: 15922569

Start: 2245884

End: 2246546

Strand: Direct

Name: 15922569

Synonym: ST2238

Alternate gene names: NA

Gene position: 2245884-2246546 (Clockwise)

Preceding gene: 15922568

Following gene: 15922570

Centisome position: 83.34

GC content: 33.63

Gene sequence:

>663_bases
ATGGATAGTTTAGAAAAAATAAAAGAGGAAGTTATTTCTTGTAAGAAGTGCAAATTATGGCAATTTAGAACCAACGCAGT
ACCTGGTGAGGGATATCCAAAAGCCGAAATAATGTTTGTTGGAGAAGCACCGGGGGAGAATGAAGATAAAGAAGGAAGAC
CATTTGTTGGTGCAGCTGGTAAATTACTTACTCAGATGATTAAGGAAATTTTAGGATTAGAAAGAGATCAAGTATTTATT
ACTAATGTAGTGAAATGTAGACCACCAAATAATAGAGATCCAGAGGAAGATGAGATCACGGCTTGTTCTCCTTATCTAGA
TAGGCAGATTGACATTATCATGCCAAAAATCATAGTAACTTTAGGGAGACATTCTACAAAATATATTTTTAGTAAAATGG
GCGAAAATTTTTCGTCTATAACAAAAGTTAGAGGTAAAAGCTATGTATGGAAATATAAGGAAAAAGAGATTATAGTTTTT
CCAACTTATCATCCTGCTGCGGCACTTTATAATCCTAATCTTAGGAAAATTCTTGAGGAAGATTTTAAGAAGATAAGAGA
GTTAGCGATAACCCCAAAAAGGTATACAATTGATTATTTTCTTGGTGGTAAGAATAGATCTTGGGATAAAAGGGAAAAAA
GTGATAGTAACAGCGGCAAGTAA

Upstream 100 bases:

>100_bases
GGATCTGAGCTTGTGTTTATGCGATGAGGATCCTCAGCCGAGTGGGGGACAAATGATGATGCCGACATAGACTGAAGAAT
GAGGAGGGGTCGATTTACTG

Downstream 100 bases:

>100_bases
AGGTATAGGTTTTGCAACAGCGAAAAGGTTTTTAGAGGAAGGTGCAAAAGTTATTATATCTTCTCATGACGAAAATAATC
TAAGGAAAGCTTATGAAAGA

Product: DNA-directed DNA polymerase

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase-Related Protein; Uracil-DNA Glycosylase Family 4 Protein; DNA Polymerase-Related Protein Bacteriophage-Type; DNA Polymerase-Related Protein; DNA Glycosylase; Bacteriophage-Related DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; Uracil-DNA Glycosylase Phage-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage Shock Protein E; DNA Polymerase Domain-Containing Protein; Phage DNA Polymerase; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Phage SpO1 DNA Polymerase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Bacteriophage-Type DNA Polymerase; Uracil DNA Glycosylase; DNA-Directed DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase-Related Protein

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MDSLEKIKEEVISCKKCKLWQFRTNAVPGEGYPKAEIMFVGEAPGENEDKEGRPFVGAAGKLLTQMIKEILGLERDQVFI
TNVVKCRPPNNRDPEEDEITACSPYLDRQIDIIMPKIIVTLGRHSTKYIFSKMGENFSSITKVRGKSYVWKYKEKEIIVF
PTYHPAAALYNPNLRKILEEDFKKIRELAITPKRYTIDYFLGGKNRSWDKREKSDSNSGK

Sequences:

>Translated_220_residues
MDSLEKIKEEVISCKKCKLWQFRTNAVPGEGYPKAEIMFVGEAPGENEDKEGRPFVGAAGKLLTQMIKEILGLERDQVFI
TNVVKCRPPNNRDPEEDEITACSPYLDRQIDIIMPKIIVTLGRHSTKYIFSKMGENFSSITKVRGKSYVWKYKEKEIIVF
PTYHPAAALYNPNLRKILEEDFKKIRELAITPKRYTIDYFLGGKNRSWDKREKSDSNSGK
>Mature_220_residues
MDSLEKIKEEVISCKKCKLWQFRTNAVPGEGYPKAEIMFVGEAPGENEDKEGRPFVGAAGKLLTQMIKEILGLERDQVFI
TNVVKCRPPNNRDPEEDEITACSPYLDRQIDIIMPKIIVTLGRHSTKYIFSKMGENFSSITKVRGKSYVWKYKEKEIIVF
PTYHPAAALYNPNLRKILEEDFKKIRELAITPKRYTIDYFLGGKNRSWDKREKSDSNSGK

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 25360; Mature: 25360

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLEKIKEEVISCKKCKLWQFRTNAVPGEGYPKAEIMFVGEAPGENEDKEGRPFVGAAG
CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHH
KLLTQMIKEILGLERDQVFITNVVKCRPPNNRDPEEDEITACSPYLDRQIDIIMPKIIVT
HHHHHHHHHHHCCCCCCEEEEHEEEECCCCCCCCCCCCEEECCHHHHCHHHHHHHHHHHH
LGRHSTKYIFSKMGENFSSITKVRGKSYVWKYKEKEIIVFPTYHPAAALYNPNLRKILEE
HCCCHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCEEEEEECCCCHHHHCCCHHHHHHHH
DFKKIRELAITPKRYTIDYFLGGKNRSWDKREKSDSNSGK
HHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MDSLEKIKEEVISCKKCKLWQFRTNAVPGEGYPKAEIMFVGEAPGENEDKEGRPFVGAAG
CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHH
KLLTQMIKEILGLERDQVFITNVVKCRPPNNRDPEEDEITACSPYLDRQIDIIMPKIIVT
HHHHHHHHHHHCCCCCCEEEEHEEEECCCCCCCCCCCCEEECCHHHHCHHHHHHHHHHHH
LGRHSTKYIFSKMGENFSSITKVRGKSYVWKYKEKEIIVFPTYHPAAALYNPNLRKILEE
HCCCHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCEEEEEECCCCHHHHCCCHHHHHHHH
DFKKIRELAITPKRYTIDYFLGGKNRSWDKREKSDSNSGK
HHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA