| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15922309
Identifier: 15922309
GI number: 15922309
Start: 2006311
End: 2006736
Strand: Direct
Name: 15922309
Synonym: ST1993
Alternate gene names: NA
Gene position: 2006311-2006736 (Clockwise)
Preceding gene: 15922308
Following gene: 15922310
Centisome position: 74.45
GC content: 33.57
Gene sequence:
>426_bases GTGTTAAATAACGAAGTGATTAAGAGAGGGTTGGTAAAAGATTGCTATAGCGTTGATTTGGATCTTAGCTTTAAAGATGT GGAACAGTTATCCCGTTTCCTATTTCTGATCAAAACGCTTTTGAGGTGCAAGCTTAGTAGAGATGAGAGAGAAAAGTATT TTGGTAATGCTAGGCAGGGCAAGGCTTTTATGTCTAAAATACTCTATATCCCTAAAATAAGGTATAATAGGCTAGAATCA TTAGATATATGTATAGTTGCAGAGGATAGTAAAGACTATGAACCTCCAGAAAACTTAAAGGATGAGATCAGAGAACTTTA TTTAGTGTTCACGAAAGTCGAAAATGAGTATTACAAAGATAAAAAAGTTACTGATTTTCCAGAGTTATCTAAGTTTTTTA AGAATTGCATTGGGAGGAAAAGATGA
Upstream 100 bases:
>100_bases AAGAATAAAAAGCTTGACACGAATATAAACGAAAAGTTATCAATGTTAAAAGTGTTCTATCCCAGTTATTTGCTTTCAAC AATTGAAGTGGTGGAAGAGG
Downstream 100 bases:
>100_bases TCAAATTCGAGTTTATACTAAAGCCCATAACTCCTTTTACATTAACCCTTAGTGACGTATTTAAAGAGAGTTATATCAGT TCTATTAAAGGGATGTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MLNNEVIKRGLVKDCYSVDLDLSFKDVEQLSRFLFLIKTLLRCKLSRDEREKYFGNARQGKAFMSKILYIPKIRYNRLES LDICIVAEDSKDYEPPENLKDEIRELYLVFTKVENEYYKDKKVTDFPELSKFFKNCIGRKR
Sequences:
>Translated_141_residues MLNNEVIKRGLVKDCYSVDLDLSFKDVEQLSRFLFLIKTLLRCKLSRDEREKYFGNARQGKAFMSKILYIPKIRYNRLES LDICIVAEDSKDYEPPENLKDEIRELYLVFTKVENEYYKDKKVTDFPELSKFFKNCIGRKR >Mature_141_residues MLNNEVIKRGLVKDCYSVDLDLSFKDVEQLSRFLFLIKTLLRCKLSRDEREKYFGNARQGKAFMSKILYIPKIRYNRLES LDICIVAEDSKDYEPPENLKDEIRELYLVFTKVENEYYKDKKVTDFPELSKFFKNCIGRKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16913; Mature: 16913
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNNEVIKRGLVKDCYSVDLDLSFKDVEQLSRFLFLIKTLLRCKLSRDEREKYFGNARQG CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC KAFMSKILYIPKIRYNRLESLDICIVAEDSKDYEPPENLKDEIRELYLVFTKVENEYYKD HHHHHHHHHCCCHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC KKVTDFPELSKFFKNCIGRKR CCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MLNNEVIKRGLVKDCYSVDLDLSFKDVEQLSRFLFLIKTLLRCKLSRDEREKYFGNARQG CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC KAFMSKILYIPKIRYNRLESLDICIVAEDSKDYEPPENLKDEIRELYLVFTKVENEYYKD HHHHHHHHHCCCHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC KKVTDFPELSKFFKNCIGRKR CCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA