| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15922308
Identifier: 15922308
GI number: 15922308
Start: 2005476
End: 2006321
Strand: Direct
Name: 15922308
Synonym: ST1992
Alternate gene names: NA
Gene position: 2005476-2006321 (Clockwise)
Preceding gene: 15922307
Following gene: 15922309
Centisome position: 74.42
GC content: 37.35
Gene sequence:
>846_bases ATGGGTAACCCACCAGCTGATTTTGAAACAAGAGTTAAAAAATTTCTAGCTGAACTAAAAGGGAGAAGTTTGAAATTTTT TAATGATTATTTGAAAGATGAGATCGAACTATTAGTGAGTTCAGGGCTTCTCGATAAAAAATACCTTGATGACAAATACT ATAACGAGTCAAACCTGGCTGAACTCCTAAAGGCATACTTTGATGTAACGGGTTGGAATTTCAGCGAATCCTGTTACGTT ATTTCCGAGTTAGATAGGTGCGAGAATACCGCACTTATAGAGGATGAGGATAGGAAGAAATTTAGAGAAGCCTGGAACAA GTTAACTAATAGAGAGAACTTCTGTAGAACTTGTATGCTCTACGGAGCTTCAGGATTAAGGGCTTCTGTAAGGTTTACAA ACTTTTACCCTATAGACCCCTTTCCAGTAAGGATAGATAGGCTGACTCACGTTTCTATTGACAGACGTACATGGGCTGCA TCTCCCCGAAAGCTATATAACGAGGAAATTATCACTATAGGCACTAAATTTCTAGGATTTGCATTACTACTTAAAGATGA GTATTTAAATCGATTCATAGAAGACCTAAAACTGTTAAGTGAGAAAGCTGAGAAGATGGAGGTTACGTTAGGTGCTAGGG GTAGCGTAGGTTATGGAGTTTTCTCCCTCAAGTTCGGCGATTTTACCATAGAGCTTAGCGAGGAAAGCATACTGGGTAAG TTAAAATTAAACTTCAAGAATAAAAAGCTTGACACGAATATAAACGAAAAGTTATCAATGTTAAAAGTGTTCTATCCCAG TTATTTGCTTTCAACAATTGAAGTGGTGGAAGAGGGTGTTAAATAA
Upstream 100 bases:
>100_bases AGTTATCAATTATCATGGTAAAGACTACTTAATTCCTTACATTCCCTCCACGTCTTTTAAAGGAGTTTTAAGGAGTACAG TTGAGGTAAGTAAGAGGAAG
Downstream 100 bases:
>100_bases CGAAGTGATTAAGAGAGGGTTGGTAAAAGATTGCTATAGCGTTGATTTGGATCTTAGCTTTAAAGATGTGGAACAGTTAT CCCGTTTCCTATTTCTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MGNPPADFETRVKKFLAELKGRSLKFFNDYLKDEIELLVSSGLLDKKYLDDKYYNESNLAELLKAYFDVTGWNFSESCYV ISELDRCENTALIEDEDRKKFREAWNKLTNRENFCRTCMLYGASGLRASVRFTNFYPIDPFPVRIDRLTHVSIDRRTWAA SPRKLYNEEIITIGTKFLGFALLLKDEYLNRFIEDLKLLSEKAEKMEVTLGARGSVGYGVFSLKFGDFTIELSEESILGK LKLNFKNKKLDTNINEKLSMLKVFYPSYLLSTIEVVEEGVK
Sequences:
>Translated_281_residues MGNPPADFETRVKKFLAELKGRSLKFFNDYLKDEIELLVSSGLLDKKYLDDKYYNESNLAELLKAYFDVTGWNFSESCYV ISELDRCENTALIEDEDRKKFREAWNKLTNRENFCRTCMLYGASGLRASVRFTNFYPIDPFPVRIDRLTHVSIDRRTWAA SPRKLYNEEIITIGTKFLGFALLLKDEYLNRFIEDLKLLSEKAEKMEVTLGARGSVGYGVFSLKFGDFTIELSEESILGK LKLNFKNKKLDTNINEKLSMLKVFYPSYLLSTIEVVEEGVK >Mature_280_residues GNPPADFETRVKKFLAELKGRSLKFFNDYLKDEIELLVSSGLLDKKYLDDKYYNESNLAELLKAYFDVTGWNFSESCYVI SELDRCENTALIEDEDRKKFREAWNKLTNRENFCRTCMLYGASGLRASVRFTNFYPIDPFPVRIDRLTHVSIDRRTWAAS PRKLYNEEIITIGTKFLGFALLLKDEYLNRFIEDLKLLSEKAEKMEVTLGARGSVGYGVFSLKFGDFTIELSEESILGKL KLNFKNKKLDTNINEKLSMLKVFYPSYLLSTIEVVEEGVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32599; Mature: 32468
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNPPADFETRVKKFLAELKGRSLKFFNDYLKDEIELLVSSGLLDKKYLDDKYYNESNLA CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHCCHHHHH ELLKAYFDVTGWNFSESCYVISELDRCENTALIEDEDRKKFREAWNKLTNRENFCRTCML HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH YGASGLRASVRFTNFYPIDPFPVRIDRLTHVSIDRRTWAASPRKLYNEEIITIGTKFLGF HCCCCCEEEEEEEEECCCCCCCEEEEHEEEEEECCHHHCCCHHHHHCCHHEEEHHHHHHH ALLLKDEYLNRFIEDLKLLSEKAEKMEVTLGARGSVGYGVFSLKFGDFTIELSEESILGK HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECCEEEEECCCCEEEE LKLNFKNKKLDTNINEKLSMLKVFYPSYLLSTIEVVEEGVK EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GNPPADFETRVKKFLAELKGRSLKFFNDYLKDEIELLVSSGLLDKKYLDDKYYNESNLA CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHCCHHHHH ELLKAYFDVTGWNFSESCYVISELDRCENTALIEDEDRKKFREAWNKLTNRENFCRTCML HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH YGASGLRASVRFTNFYPIDPFPVRIDRLTHVSIDRRTWAASPRKLYNEEIITIGTKFLGF HCCCCCEEEEEEEEECCCCCCCEEEEHEEEEEECCHHHCCCHHHHHCCHHEEEHHHHHHH ALLLKDEYLNRFIEDLKLLSEKAEKMEVTLGARGSVGYGVFSLKFGDFTIELSEESILGK HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECCEEEEECCCCEEEE LKLNFKNKKLDTNINEKLSMLKVFYPSYLLSTIEVVEEGVK EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA