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The map label for this gene is 15922260

Identifier: 15922260

GI number: 15922260

Start: 1950409

End: 1950810

Strand: Direct

Name: 15922260

Synonym: ST1943

Alternate gene names: NA

Gene position: 1950409-1950810 (Clockwise)

Preceding gene: 15922259

Following gene: 15922261

Centisome position: 72.38

GC content: 33.08

Gene sequence:

>402_bases
GTGGGAAAGATGGAATGTAAATGCTTAGATAGCGATATACTTATTGATTTTCTAAGGGGTAAGGAAAAGGCAGTGAAGTA
CATTGAATCCGTAAGAGGGAGTAGTAGGATAGTAACTACAGTAATTAACGTATTTGAACTGTATTATGGGGCTTTAAAAT
ATAATAAGGATGTTGAGAAACTTGATGAATTTTTACAATCAGTAGAAATACTCCCATTTACAGTATCTGAGGCTAAGAAG
GCTGCTGAAATAGAAGTAGACCTTGAAAATCGAGGAGAGGTAATAGGTTTAAAAGACGTGTTAATAAGTTCTATTGCATT
AAATAATAATTGTACTATAGTTACCGGAAATGTTAAACACTTTGAAAGAATTCAAGGGGTTAAAGTTGAGAACTGGAAGT
AA

Upstream 100 bases:

>100_bases
TGGTGAAGAGTAGTAGAAAAAATATTATGGATTATGCTGGTATTTGGGGAGATATGAATGATGAAGAGGTTAACAAACTG
TTCGAAGATTTAAAGAAGAT

Downstream 100 bases:

>100_bases
GAAAAGTAATATAACAAACTATCTGCGTACTTACTATAAAAAGAGTAAGCTAACTTGGCTAAAATAGCCGATAATTATTG
GAAGAAGATGAGTCTATAAG

Product: virulence-associated protein

Products: NA

Alternate protein names: PilT Domain-Containing Protein; Nitrogen Regulatory Protein; PilT Protein-Like; PIN Domain; PilT Protein Domain-Containing Protein; PilT Protein; PIN Domain Protein; NtrR2 Transcription Regulator; Virulence Associated Protein C; Virulence-Associated Protein VapC-Like Protein; VapC Protein; Virulence-Associated Protein

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MGKMECKCLDSDILIDFLRGKEKAVKYIESVRGSSRIVTTVINVFELYYGALKYNKDVEKLDEFLQSVEILPFTVSEAKK
AAEIEVDLENRGEVIGLKDVLISSIALNNNCTIVTGNVKHFERIQGVKVENWK

Sequences:

>Translated_133_residues
MGKMECKCLDSDILIDFLRGKEKAVKYIESVRGSSRIVTTVINVFELYYGALKYNKDVEKLDEFLQSVEILPFTVSEAKK
AAEIEVDLENRGEVIGLKDVLISSIALNNNCTIVTGNVKHFERIQGVKVENWK
>Mature_132_residues
GKMECKCLDSDILIDFLRGKEKAVKYIESVRGSSRIVTTVINVFELYYGALKYNKDVEKLDEFLQSVEILPFTVSEAKKA
AEIEVDLENRGEVIGLKDVLISSIALNNNCTIVTGNVKHFERIQGVKVENWK

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15045; Mature: 14913

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKMECKCLDSDILIDFLRGKEKAVKYIESVRGSSRIVTTVINVFELYYGALKYNKDVEK
CCCCCEEECCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
LDEFLQSVEILPFTVSEAKKAAEIEVDLENRGEVIGLKDVLISSIALNNNCTIVTGNVKH
HHHHHHHHHCCCEEHHHHHCCEEEEEEECCCCCEEEHHHHHHHHHEECCCCEEEECCHHH
FERIQGVKVENWK
HHHHCCCCCCCCC
>Mature Secondary Structure 
GKMECKCLDSDILIDFLRGKEKAVKYIESVRGSSRIVTTVINVFELYYGALKYNKDVEK
CCCCEEECCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
LDEFLQSVEILPFTVSEAKKAAEIEVDLENRGEVIGLKDVLISSIALNNNCTIVTGNVKH
HHHHHHHHHCCCEEHHHHHCCEEEEEEECCCCCEEEHHHHHHHHHEECCCCEEEECCHHH
FERIQGVKVENWK
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA