| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15922261
Identifier: 15922261
GI number: 15922261
Start: 1951714
End: 1952595
Strand: Direct
Name: 15922261
Synonym: ST1944
Alternate gene names: NA
Gene position: 1951714-1952595 (Clockwise)
Preceding gene: 15922260
Following gene: 15922262
Centisome position: 72.43
GC content: 34.01
Gene sequence:
>882_bases ATGGTAAGTAGTCTTAGTAGTAGGGATAAAGAATTGCTTACACCGAAAGAGGCTTGTGACATGCTGAATATTTCATATAG GACTTTATTGAGGTGGATAAATGAAGGGAAAATAAAGGCGGTTAAACTAAACAGTGGTAGAATAAGAATACCATTAGAAG AAATTGAAAAAGTTATGGAAGAAGAAGATAATGACAAAGACATAACTGCTATGATTATAAATGAATTTATGAATAGCTCG GAGCAACGAAAAAAGGACTATAAAAAATATACTGAGCTTGCTAAAGAGTTTGCTAGAAAGTTATTAAATAATACCATTAT CCATATTTCGGTTTTACCTTCTACATATGAGAAATGTGGAATTGCGTGCTCTGAGGGGATCTCAATTTTAGGTAATATCT ACGTATCTGAAGGTTTCTTTTCATTGCCCGAAAGCGTTAAAGAGTTTATAATAGCACATGAAGTAGCTCACATAATAAGA GGACATTCTATTACTAAATACGTGCTATCGATCTTCACTGGAGTATTACATGAAGAAGCACGGCAGTTAACAATGAGTAG TTTTAGAGACTCTAGAATCATTAAGAAAATAGCCAGGTTTTTTATTGGCGCTATTTTAGAAGCTTCTGTTTTATACGCAG ATGCTACCGCTAACGCTCAAACAATAAAGCAACAAGAACTAGAAGCGGATAGCTATGCTGCTAAGTTAGTTGGTACTGAA AAGACAAAGGACTTTATTAAATTCCTTGAACTTTATAGGCAGGATTACAATAACATAAGCCATACCTCTCTTTTAGGGTT TCCTGCATTAACGATAGACGAGAGGATATCTAATCTAGAGAAATTAATTAAAGGAGGGTTAGATTGTGCCAATTTATGTT AA
Upstream 100 bases:
>100_bases AGTTAATAATAGTAAAAATTCATAATGTTTATTGACATTCATTATTGACATTCATTGACATAAAGTAAAGTTTATATCCA GCCTATTCAGATATAATATT
Downstream 100 bases:
>100_bases TATGGTATTATTAAAGCCAAACAGTGACCAGATTACTGCATATTATATACCTCAAGAGGAAATACGAGGGAAAAACCAGA GTCAACTTATTAATTCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MVSSLSSRDKELLTPKEACDMLNISYRTLLRWINEGKIKAVKLNSGRIRIPLEEIEKVMEEEDNDKDITAMIINEFMNSS EQRKKDYKKYTELAKEFARKLLNNTIIHISVLPSTYEKCGIACSEGISILGNIYVSEGFFSLPESVKEFIIAHEVAHIIR GHSITKYVLSIFTGVLHEEARQLTMSSFRDSRIIKKIARFFIGAILEASVLYADATANAQTIKQQELEADSYAAKLVGTE KTKDFIKFLELYRQDYNNISHTSLLGFPALTIDERISNLEKLIKGGLDCANLC
Sequences:
>Translated_293_residues MVSSLSSRDKELLTPKEACDMLNISYRTLLRWINEGKIKAVKLNSGRIRIPLEEIEKVMEEEDNDKDITAMIINEFMNSS EQRKKDYKKYTELAKEFARKLLNNTIIHISVLPSTYEKCGIACSEGISILGNIYVSEGFFSLPESVKEFIIAHEVAHIIR GHSITKYVLSIFTGVLHEEARQLTMSSFRDSRIIKKIARFFIGAILEASVLYADATANAQTIKQQELEADSYAAKLVGTE KTKDFIKFLELYRQDYNNISHTSLLGFPALTIDERISNLEKLIKGGLDCANLC >Mature_293_residues MVSSLSSRDKELLTPKEACDMLNISYRTLLRWINEGKIKAVKLNSGRIRIPLEEIEKVMEEEDNDKDITAMIINEFMNSS EQRKKDYKKYTELAKEFARKLLNNTIIHISVLPSTYEKCGIACSEGISILGNIYVSEGFFSLPESVKEFIIAHEVAHIIR GHSITKYVLSIFTGVLHEEARQLTMSSFRDSRIIKKIARFFIGAILEASVLYADATANAQTIKQQELEADSYAAKLVGTE KTKDFIKFLELYRQDYNNISHTSLLGFPALTIDERISNLEKLIKGGLDCANLC
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33230; Mature: 33230
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSSLSSRDKELLTPKEACDMLNISYRTLLRWINEGKIKAVKLNSGRIRIPLEEIEKVME CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECHHHHHHHHH EEDNDKDITAMIINEFMNSSEQRKKDYKKYTELAKEFARKLLNNTIIHISVLPSTYEKCG CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHC IACSEGISILGNIYVSEGFFSLPESVKEFIIAHEVAHIIRGHSITKYVLSIFTGVLHEEA CCHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RQLTMSSFRDSRIIKKIARFFIGAILEASVLYADATANAQTIKQQELEADSYAAKLVGTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCH KTKDFIKFLELYRQDYNNISHTSLLGFPALTIDERISNLEKLIKGGLDCANLC HHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure MVSSLSSRDKELLTPKEACDMLNISYRTLLRWINEGKIKAVKLNSGRIRIPLEEIEKVME CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECHHHHHHHHH EEDNDKDITAMIINEFMNSSEQRKKDYKKYTELAKEFARKLLNNTIIHISVLPSTYEKCG CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHC IACSEGISILGNIYVSEGFFSLPESVKEFIIAHEVAHIIRGHSITKYVLSIFTGVLHEEA CCHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RQLTMSSFRDSRIIKKIARFFIGAILEASVLYADATANAQTIKQQELEADSYAAKLVGTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCH KTKDFIKFLELYRQDYNNISHTSLLGFPALTIDERISNLEKLIKGGLDCANLC HHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA