| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is smoK [H]
Identifier: 15922232
GI number: 15922232
Start: 1924650
End: 1925429
Strand: Direct
Name: smoK [H]
Synonym: ST1917
Alternate gene names: 15922232
Gene position: 1924650-1925429 (Clockwise)
Preceding gene: 15922231
Following gene: 15922233
Centisome position: 71.42
GC content: 33.46
Gene sequence:
>780_bases GTGACTTCCGGGAGAATAATAATAGATAATGAAGACGTTACAGATCTTCCTCCTTCAAAAAGAGATGTGGGAATGGTTTT TCAGAATTATGCATTATATCCAAATAAAACTGTTCATGAAAATATGGCTATAGCTCTTGAAAATATTAAGATAAGTAAAT CGGAAAAAGAAAATAGAATAGTTGAAATTTCGAAGGAATTAGATATATATAATTTACTGGATAAATATCCTGGTCAACTT TCTGGAGGTCAGCAACAAAGAGTAGCAATAGCAAAGGCTTTGGTCAGAAGACCTAAGGTAATGCTAATGGACGAACCTCT ATCAAACCTAGACGTTCAACTTAGGTATTCTGCCAGAAAATTGATCAAGAAAATACAAAGAGAATTTAATATCACTACAC TTTACGTTACCCATGATTCTAATGAGGCTTTAGCTATTGCAGATAGAATATGTGTAATAGATAAGGGAAAGGTTTTACAG GTGGGAAAACCGGAGGAAATTTATAGTTCTCCCTCAAATATAACTGTTGCATCCCTATTAACGTCTATGAGCTTTATACG AGTGGATGGAAAAACTATTGGGGTTAGACCAGAGGATGTTATATTAGGTGAGGGGCAATATGAAGGTACAGTTACAAATT CCGAATTTTGGGGTTCGTATTACTTAATTTATATTGACTATAACGGAAATGAGATAAGGGCTATGAGCAAAAATAGAATA AAAGAAGGCTCAAAAATAAAGTTCGAATTAACTAATTATAAGGTGTTCAATCATGATTAG
Upstream 100 bases:
>100_bases TGTAAGCCTCGAAATAGAAAAGGGAGAGTTCTTCATAATTTTAGGCAGATCAGGTTCTGGGAAAACTACACTTCTCAGAC TTATAGCTGGATTGGAAAAA
Downstream 100 bases:
>100_bases ATATTCCATACCTTACTTAGTATATATTACTATTTTCGGAATTTTACCATTAATTCTAACGTTTGTAATAGTTGGTTTAA ACTTTAATCTTGCGAAATCG
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: Protein PolK [H]
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTSGRIIIDNEDVTDLPPSKRDVGMVFQNYALYPNKTVHENMAIALENIKISKSEKENRIVEISKELDIYNLLDKYPGQL SGGQQQRVAIAKALVRRPKVMLMDEPLSNLDVQLRYSARKLIKKIQREFNITTLYVTHDSNEALAIADRICVIDKGKVLQ VGKPEEIYSSPSNITVASLLTSMSFIRVDGKTIGVRPEDVILGEGQYEGTVTNSEFWGSYYLIYIDYNGNEIRAMSKNRI KEGSKIKFELTNYKVFNHD
Sequences:
>Translated_259_residues MTSGRIIIDNEDVTDLPPSKRDVGMVFQNYALYPNKTVHENMAIALENIKISKSEKENRIVEISKELDIYNLLDKYPGQL SGGQQQRVAIAKALVRRPKVMLMDEPLSNLDVQLRYSARKLIKKIQREFNITTLYVTHDSNEALAIADRICVIDKGKVLQ VGKPEEIYSSPSNITVASLLTSMSFIRVDGKTIGVRPEDVILGEGQYEGTVTNSEFWGSYYLIYIDYNGNEIRAMSKNRI KEGSKIKFELTNYKVFNHD >Mature_258_residues TSGRIIIDNEDVTDLPPSKRDVGMVFQNYALYPNKTVHENMAIALENIKISKSEKENRIVEISKELDIYNLLDKYPGQLS GGQQQRVAIAKALVRRPKVMLMDEPLSNLDVQLRYSARKLIKKIQREFNITTLYVTHDSNEALAIADRICVIDKGKVLQV GKPEEIYSSPSNITVASLLTSMSFIRVDGKTIGVRPEDVILGEGQYEGTVTNSEFWGSYYLIYIDYNGNEIRAMSKNRIK EGSKIKFELTNYKVFNHD
Specific function: Part Of The Abc Transporter Complex Fbpabc Involved In Ferric Cations Import. Responsible For Energy Coupling To The Transport System (By Similarity). [C]
COG id: COG3839
COG function: function code G; ABC-type sugar transport systems, ATPase components
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI171184400, Length=195, Percent_Identity=30.2564102564103, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI42741659, Length=179, Percent_Identity=30.1675977653631, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI105990541, Length=164, Percent_Identity=28.6585365853659, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI31657092, Length=166, Percent_Identity=27.1084337349398, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI9955966, Length=177, Percent_Identity=29.9435028248588, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI45243524, Length=177, Percent_Identity=29.9435028248588, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI9955968, Length=177, Percent_Identity=29.9435028248588, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI9961250, Length=173, Percent_Identity=31.7919075144509, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI153792144, Length=164, Percent_Identity=28.6585365853659, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI27262624, Length=136, Percent_Identity=33.0882352941176, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI27262626, Length=136, Percent_Identity=33.0882352941176, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI4505771, Length=173, Percent_Identity=31.7919075144509, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI9961252, Length=173, Percent_Identity=31.7919075144509, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI255708477, Length=178, Percent_Identity=30.3370786516854, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI148612844, Length=178, Percent_Identity=30.3370786516854, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI27881501, Length=167, Percent_Identity=27.5449101796407, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI116734710, Length=161, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI30795238, Length=167, Percent_Identity=27.5449101796407, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI45446740, Length=164, Percent_Identity=27.4390243902439, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI47078218, Length=164, Percent_Identity=27.4390243902439, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI87081709, Length=284, Percent_Identity=35.2112676056338, Blast_Score=191, Evalue=5e-50, Organism=Escherichia coli, GI1790467, Length=193, Percent_Identity=46.1139896373057, Blast_Score=173, Evalue=9e-45, Organism=Escherichia coli, GI87082267, Length=295, Percent_Identity=34.2372881355932, Blast_Score=172, Evalue=2e-44, Organism=Escherichia coli, GI1787370, Length=184, Percent_Identity=44.5652173913043, Blast_Score=170, Evalue=1e-43, Organism=Escherichia coli, GI1787712, Length=242, Percent_Identity=35.5371900826446, Blast_Score=159, Evalue=1e-40, Organism=Escherichia coli, GI87081791, Length=283, Percent_Identity=31.8021201413428, Blast_Score=156, Evalue=2e-39, Organism=Escherichia coli, GI1788761, Length=178, Percent_Identity=37.0786516853933, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1789032, Length=178, Percent_Identity=34.8314606741573, Blast_Score=130, Evalue=9e-32, Organism=Escherichia coli, GI1789672, Length=185, Percent_Identity=35.6756756756757, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1788450, Length=174, Percent_Identity=37.9310344827586, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1786398, Length=238, Percent_Identity=30.2521008403361, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1786253, Length=167, Percent_Identity=36.5269461077844, Blast_Score=119, Evalue=1e-28, Organism=Escherichia coli, GI1787029, Length=189, Percent_Identity=35.978835978836, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1787164, Length=145, Percent_Identity=37.9310344827586, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1789891, Length=145, Percent_Identity=39.3103448275862, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI145693107, Length=171, Percent_Identity=35.672514619883, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1786872, Length=175, Percent_Identity=33.1428571428571, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1788225, Length=158, Percent_Identity=37.3417721518987, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1787500, Length=171, Percent_Identity=30.9941520467836, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787089, Length=144, Percent_Identity=38.8888888888889, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1786981, Length=168, Percent_Identity=38.0952380952381, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI1789873, Length=148, Percent_Identity=39.8648648648649, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1788644, Length=158, Percent_Identity=34.8101265822785, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1786563, Length=140, Percent_Identity=35, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1788506, Length=180, Percent_Identity=26.1111111111111, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1789962, Length=199, Percent_Identity=27.6381909547739, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI48994883, Length=177, Percent_Identity=29.3785310734463, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1789963, Length=185, Percent_Identity=30.8108108108108, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI48994943, Length=160, Percent_Identity=31.25, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1787758, Length=175, Percent_Identity=29.7142857142857, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786703, Length=138, Percent_Identity=36.9565217391304, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788053, Length=138, Percent_Identity=31.1594202898551, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI87081834, Length=155, Percent_Identity=33.5483870967742, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787547, Length=176, Percent_Identity=27.8409090909091, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789593, Length=150, Percent_Identity=29.3333333333333, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI48994997, Length=113, Percent_Identity=35.3982300884956, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1790162, Length=178, Percent_Identity=26.9662921348315, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789864, Length=191, Percent_Identity=25.6544502617801, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787105, Length=165, Percent_Identity=30.9090909090909, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1787759, Length=164, Percent_Identity=28.0487804878049, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786319, Length=160, Percent_Identity=28.75, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786803, Length=173, Percent_Identity=28.3236994219653, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1790544, Length=161, Percent_Identity=29.1925465838509, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI87082268, Length=162, Percent_Identity=30.2469135802469, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789890, Length=187, Percent_Identity=26.2032085561497, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787792, Length=168, Percent_Identity=27.9761904761905, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1786698, Length=161, Percent_Identity=31.055900621118, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1788165, Length=128, Percent_Identity=27.34375, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87081782, Length=190, Percent_Identity=24.7368421052632, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1790190, Length=172, Percent_Identity=30.8139534883721, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787143, Length=174, Percent_Identity=30.4597701149425, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1789991, Length=141, Percent_Identity=31.2056737588652, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI48995001, Length=141, Percent_Identity=29.7872340425532, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1789586, Length=174, Percent_Identity=25.2873563218391, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI193208177, Length=183, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17565938, Length=175, Percent_Identity=33.7142857142857, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI212646699, Length=179, Percent_Identity=30.1675977653631, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17567265, Length=180, Percent_Identity=30, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI115534520, Length=175, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17567269, Length=178, Percent_Identity=30.8988764044944, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI193202349, Length=181, Percent_Identity=29.8342541436464, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17569145, Length=176, Percent_Identity=30.1136363636364, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17569143, Length=176, Percent_Identity=31.8181818181818, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193211017, Length=178, Percent_Identity=30.8988764044944, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193211015, Length=178, Percent_Identity=30.8988764044944, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71996809, Length=178, Percent_Identity=30.8988764044944, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17541710, Length=166, Percent_Identity=34.9397590361446, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17565586, Length=164, Percent_Identity=31.0975609756098, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71984940, Length=179, Percent_Identity=30.7262569832402, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115535101, Length=177, Percent_Identity=30.5084745762712, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17511077, Length=169, Percent_Identity=33.7278106508876, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17558664, Length=172, Percent_Identity=30.2325581395349, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI25146777, Length=176, Percent_Identity=31.25, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17543740, Length=172, Percent_Identity=30.2325581395349, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193209708, Length=186, Percent_Identity=26.3440860215054, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=185, Percent_Identity=27.027027027027, Blast_Score=80, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323959, Length=188, Percent_Identity=28.1914893617021, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6324498, Length=169, Percent_Identity=26.6272189349112, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI24659289, Length=180, Percent_Identity=30, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI28574533, Length=164, Percent_Identity=31.0975609756098, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24653245, Length=181, Percent_Identity=31.4917127071823, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI281363262, Length=181, Percent_Identity=31.4917127071823, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28574744, Length=162, Percent_Identity=31.4814814814815, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI17136662, Length=180, Percent_Identity=30.5555555555556, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI116007328, Length=165, Percent_Identity=25.4545454545455, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574150, Length=165, Percent_Identity=25.4545454545455, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24641565, Length=181, Percent_Identity=29.2817679558011, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI85726357, Length=174, Percent_Identity=29.8850574712644, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI21357907, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI85725262, Length=148, Percent_Identity=32.4324324324324, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR008995 - InterPro: IPR005116 [H]
Pfam domain/function: PF00005 ABC_tran; PF03459 TOBE [H]
EC number: 3.6.3.30 [C]
Molecular weight: Translated: 29445; Mature: 29314
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGRIIIDNEDVTDLPPSKRDVGMVFQNYALYPNKTVHENMAIALENIKISKSEKENRI CCCCEEEECCCCCCCCCCCCCCHHHHEECEECCCCCCCCCCEEEEEEEEEECCCCCCCEE VEISKELDIYNLLDKYPGQLSGGQQQRVAIAKALVRRPKVMLMDEPLSNLDVQLRYSARK EEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEHHHHH LIKKIQREFNITTLYVTHDSNEALAIADRICVIDKGKVLQVGKPEEIYSSPSNITVASLL HHHHHHHHCCEEEEEEEECCCCEEEEEEEEEEECCCCEEECCCCHHHHCCCCCEEHHHHH TSMSFIRVDGKTIGVRPEDVILGEGQYEGTVTNSEFWGSYYLIYIDYNGNEIRAMSKNRI HHCEEEEECCEEECCCCCEEEEECCCCCCEEECCEECCEEEEEEEEECCCEEEEECHHHC KEGSKIKFELTNYKVFNHD CCCCEEEEEEEEEEEEECC >Mature Secondary Structure TSGRIIIDNEDVTDLPPSKRDVGMVFQNYALYPNKTVHENMAIALENIKISKSEKENRI CCCEEEECCCCCCCCCCCCCCHHHHEECEECCCCCCCCCCEEEEEEEEEECCCCCCCEE VEISKELDIYNLLDKYPGQLSGGQQQRVAIAKALVRRPKVMLMDEPLSNLDVQLRYSARK EEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEHHHHH LIKKIQREFNITTLYVTHDSNEALAIADRICVIDKGKVLQVGKPEEIYSSPSNITVASLL HHHHHHHHCCEEEEEEEECCCCEEEEEEEEEEECCCCEEECCCCHHHHCCCCCEEHHHHH TSMSFIRVDGKTIGVRPEDVILGEGQYEGTVTNSEFWGSYYLIYIDYNGNEIRAMSKNRI HHCEEEEECCEEECCCCCEEEEECCCCCCEEECCEECCEEEEEEEEECCCEEEEECHHHC KEGSKIKFELTNYKVFNHD CCCCEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9335280 [H]