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The map label for this gene is yurM [H]

Identifier: 15922233

GI number: 15922233

Start: 1925422

End: 1927065

Strand: Direct

Name: yurM [H]

Synonym: ST1918

Alternate gene names: 15922233

Gene position: 1925422-1927065 (Clockwise)

Preceding gene: 15922232

Following gene: 15922236

Centisome position: 71.45

GC content: 32.54

Gene sequence:

>1644_bases
ATGATTAGATATTCCATACCTTACTTAGTATATATTACTATTTTCGGAATTTTACCATTAATTCTAACGTTTGTAATAGT
TGGTTTAAACTTTAATCTTGCGAAATCGGCTTTTTCAATAACAAATGTTGGTGAAATAATATATAATACTTTTTACTTCT
CATTATTTACTGCAATAGTTTCAACTATTTTGGGCTTTATTCTCGCTATAGGAGTTGATATGTTCCCTAAAAAAGTCTTA
ATCTTATTAGCCCTATTACCCTTTACAATACCTTTTACGTCATCAGCACTTATCTGGGTAATAAGTTTTTATGGAGGTTA
CGGATGGTTCACCTACTTACTTGGAATTAATTATGATCCTTTATACTTCTCTAAAACAGCGTTAACTGCAGTAAGCCTTG
TCAGTGCATGGAGTTCTACTCCTTTAGCGTTTTTACTAATATTAGCCTCTTTAAGGAGTGTCCCAGTTGAAGTTAAGGAA
TCGGCACAGATAGACGGTTTAACTCTATCCCAATATTACCTTAATGTAGCCTTTCCCTATGCATTAAAAGGAATATTACT
TTCCTTCCTTATTAATTTCGTATTATCCATGGGTAACTTTGACCTACCATATGTTATGACTCAAGGAGGACCAGGGTTTT
CTACAACAACACTTTCGTTAATCGTATATTTCATGATGTTTGAATACGATAACTTTTCTGGTGGTGCATTATTTGCGGCA
ATACTTTCTCTTATAGCAACACTTCCAGCAATAGGTGTTGCCTTATTAATAAAGAAAGGAGGTTTTAAAGTTAGTTTACC
AGCAATCAAAATCCCAGATAAGTTATTCAAACCGATAATTCTAGCTCTTACCGTAATAATTATATTATTTTTAGATTTTC
CAGTCTATTGGATGATATTAGTCGCTACGAGACCTAACAATTTAGATTTCGTAAAACCGCCAATTTTACTTCCCAAATCC
ATTAATTTGTCTTATTTAATATCATCATTTTATTCCTCAATACCGTACATGATAAGTTCAATAATTGTAGCATTAATTGT
AGGCGTAATTACAATTCTACTGTCAAGTATAAGTGCCTATGAGAGTGCTAGAAAATTCTGGTTCTGGCTCCTAATATTAT
CAATATATTTATATGCTTTACCATCAACTTCTTACATAATACCTATATATCTAATGGAGGCTGACGTTAATTTAATTAAC
ACATGGATAGGTTTAGCACTACCTTCAGCAATATTTACAGCTACTTTTGCTTTCTGGACTATGTTCAATTTCTATATTGA
TTTCCCTAAAGTATATGAAGAAGCTGCGGAAATTGATGGAATGAAAAATAAGATGCTTAGATTAATATTACCACTATCCA
GACCTTTCTTAATTGCCAGTTTTATAATCTCTTTCATATTTGCCTGGCATTTACTATTTTACCCGCTAGTATTAAGCGAA
ACACCATATAATATGAATTTCCCACCTAGTGGGAGTGAAACAATAACTATCTTTGCACTGAATTCAATAACACAAGGATC
AGTAAATTGGGCTCTATTAGCATCTTCTGCATTGATAGCTGCACTACCAGTTATAATAATATCCTATGTAGCTCAAGATT
ACGTATTAAGAGGATTATATAGTGGAGGAGTAAAAGGTAGCTGA

Upstream 100 bases:

>100_bases
ATTGACTATAACGGAAATGAGATAAGGGCTATGAGCAAAAATAGAATAAAAGAAGGCTCAAAAATAAAGTTCGAATTAAC
TAATTATAAGGTGTTCAATC

Downstream 100 bases:

>100_bases
TTTCGCGTAAAGGAAATTATCTTACCATAATGAACTAATAAATACTTTGATTTGAATTTACTCCCTTACTTTATTTCGTT
TATTACAAGGAATTTTTCAG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MIRYSIPYLVYITIFGILPLILTFVIVGLNFNLAKSAFSITNVGEIIYNTFYFSLFTAIVSTILGFILAIGVDMFPKKVL
ILLALLPFTIPFTSSALIWVISFYGGYGWFTYLLGINYDPLYFSKTALTAVSLVSAWSSTPLAFLLILASLRSVPVEVKE
SAQIDGLTLSQYYLNVAFPYALKGILLSFLINFVLSMGNFDLPYVMTQGGPGFSTTTLSLIVYFMMFEYDNFSGGALFAA
ILSLIATLPAIGVALLIKKGGFKVSLPAIKIPDKLFKPIILALTVIIILFLDFPVYWMILVATRPNNLDFVKPPILLPKS
INLSYLISSFYSSIPYMISSIIVALIVGVITILLSSISAYESARKFWFWLLILSIYLYALPSTSYIIPIYLMEADVNLIN
TWIGLALPSAIFTATFAFWTMFNFYIDFPKVYEEAAEIDGMKNKMLRLILPLSRPFLIASFIISFIFAWHLLFYPLVLSE
TPYNMNFPPSGSETITIFALNSITQGSVNWALLASSALIAALPVIIISYVAQDYVLRGLYSGGVKGS

Sequences:

>Translated_547_residues
MIRYSIPYLVYITIFGILPLILTFVIVGLNFNLAKSAFSITNVGEIIYNTFYFSLFTAIVSTILGFILAIGVDMFPKKVL
ILLALLPFTIPFTSSALIWVISFYGGYGWFTYLLGINYDPLYFSKTALTAVSLVSAWSSTPLAFLLILASLRSVPVEVKE
SAQIDGLTLSQYYLNVAFPYALKGILLSFLINFVLSMGNFDLPYVMTQGGPGFSTTTLSLIVYFMMFEYDNFSGGALFAA
ILSLIATLPAIGVALLIKKGGFKVSLPAIKIPDKLFKPIILALTVIIILFLDFPVYWMILVATRPNNLDFVKPPILLPKS
INLSYLISSFYSSIPYMISSIIVALIVGVITILLSSISAYESARKFWFWLLILSIYLYALPSTSYIIPIYLMEADVNLIN
TWIGLALPSAIFTATFAFWTMFNFYIDFPKVYEEAAEIDGMKNKMLRLILPLSRPFLIASFIISFIFAWHLLFYPLVLSE
TPYNMNFPPSGSETITIFALNSITQGSVNWALLASSALIAALPVIIISYVAQDYVLRGLYSGGVKGS
>Mature_547_residues
MIRYSIPYLVYITIFGILPLILTFVIVGLNFNLAKSAFSITNVGEIIYNTFYFSLFTAIVSTILGFILAIGVDMFPKKVL
ILLALLPFTIPFTSSALIWVISFYGGYGWFTYLLGINYDPLYFSKTALTAVSLVSAWSSTPLAFLLILASLRSVPVEVKE
SAQIDGLTLSQYYLNVAFPYALKGILLSFLINFVLSMGNFDLPYVMTQGGPGFSTTTLSLIVYFMMFEYDNFSGGALFAA
ILSLIATLPAIGVALLIKKGGFKVSLPAIKIPDKLFKPIILALTVIIILFLDFPVYWMILVATRPNNLDFVKPPILLPKS
INLSYLISSFYSSIPYMISSIIVALIVGVITILLSSISAYESARKFWFWLLILSIYLYALPSTSYIIPIYLMEADVNLIN
TWIGLALPSAIFTATFAFWTMFNFYIDFPKVYEEAAEIDGMKNKMLRLILPLSRPFLIASFIISFIFAWHLLFYPLVLSE
TPYNMNFPPSGSETITIFALNSITQGSVNWALLASSALIAALPVIIISYVAQDYVLRGLYSGGVKGS

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=282, Percent_Identity=25.886524822695, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787571, Length=284, Percent_Identity=25.3521126760563, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 60745; Mature: 60745

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRYSIPYLVYITIFGILPLILTFVIVGLNFNLAKSAFSITNVGEIIYNTFYFSLFTAIV
CCEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STILGFILAIGVDMFPKKVLILLALLPFTIPFTSSALIWVISFYGGYGWFTYLLGINYDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCC
LYFSKTALTAVSLVSAWSSTPLAFLLILASLRSVPVEVKESAQIDGLTLSQYYLNVAFPY
CEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHCCCCCCCEEHHHHHHHHHHHH
ALKGILLSFLINFVLSMGNFDLPYVMTQGGPGFSTTTLSLIVYFMMFEYDNFSGGALFAA
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
ILSLIATLPAIGVALLIKKGGFKVSLPAIKIPDKLFKPIILALTVIIILFLDFPVYWMIL
HHHHHHHHHHHHHHHHHCCCCCEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VATRPNNLDFVKPPILLPKSINLSYLISSFYSSIPYMISSIIVALIVGVITILLSSISAY
EEECCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESARKFWFWLLILSIYLYALPSTSYIIPIYLMEADVNLINTWIGLALPSAIFTATFAFWT
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
MFNFYIDFPKVYEEAAEIDGMKNKMLRLILPLSRPFLIASFIISFIFAWHLLFYPLVLSE
HHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
TPYNMNFPPSGSETITIFALNSITQGSVNWALLASSALIAALPVIIISYVAQDYVLRGLY
CCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGGVKGS
CCCCCCC
>Mature Secondary Structure
MIRYSIPYLVYITIFGILPLILTFVIVGLNFNLAKSAFSITNVGEIIYNTFYFSLFTAIV
CCEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STILGFILAIGVDMFPKKVLILLALLPFTIPFTSSALIWVISFYGGYGWFTYLLGINYDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCC
LYFSKTALTAVSLVSAWSSTPLAFLLILASLRSVPVEVKESAQIDGLTLSQYYLNVAFPY
CEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHCCCCCCCEEHHHHHHHHHHHH
ALKGILLSFLINFVLSMGNFDLPYVMTQGGPGFSTTTLSLIVYFMMFEYDNFSGGALFAA
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
ILSLIATLPAIGVALLIKKGGFKVSLPAIKIPDKLFKPIILALTVIIILFLDFPVYWMIL
HHHHHHHHHHHHHHHHHCCCCCEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VATRPNNLDFVKPPILLPKSINLSYLISSFYSSIPYMISSIIVALIVGVITILLSSISAY
EEECCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESARKFWFWLLILSIYLYALPSTSYIIPIYLMEADVNLINTWIGLALPSAIFTATFAFWT
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
MFNFYIDFPKVYEEAAEIDGMKNKMLRLILPLSRPFLIASFIISFIFAWHLLFYPLVLSE
HHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
TPYNMNFPPSGSETITIFALNSITQGSVNWALLASSALIAALPVIIISYVAQDYVLRGLY
CCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGGVKGS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]