| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15922179
Identifier: 15922179
GI number: 15922179
Start: 1878452
End: 1879399
Strand: Reverse
Name: 15922179
Synonym: ST1866
Alternate gene names: NA
Gene position: 1879399-1878452 (Counterclockwise)
Preceding gene: 15922180
Following gene: 15922177
Centisome position: 69.74
GC content: 33.12
Gene sequence:
>948_bases ATGAGAATACTTATTGCTGGTTTAGGTTTTATAGCAACTCATGTAGCTGAAGTCTTATCTTCGATGCATGAAGTAACAGT CACTTATAGAAATCTCAATCCTGTAAAGAAAGTTTATCATGAAAAACTTGAGGAAAAAGGAGTTAAATTAATTAAACTAG ACATTCTGTCAGACACAGAAAGATTAAGAGAAGAAGTGAAAAAGAGCGATGTGGTTATCAACTTTATTGGAGAAATATCT GGTGATGAAAAGACACTATATATTTCTAACGTAGAAGTCCCAAAAACTATAGCGAGTATAATAAAAGAATCAGAAAATAA ACCTATTTTTATTCATACTAGCGGATCTACTTATGGGATAACTGGAGAAGTTAAAATTGAAAAGGAGCTTGGCGAAGGTC TAAATCCTCAATCACCTTTTGAAAAAACCAAACTAGAAGGGGAGAAAGTTGTTTATTCAATAGCAAAAGGGAATTTTCCC CTTATTATTATTAGACCAACCCTTGTGTATGGGAAATACTCAGCCCATATCCAATTTGTAACCATGTATAGATTAGCAAA ACTAGGTATTATTCCAAAAACTGGCATATCTTTCATGCCAATTAGTGCAAATAATATAGGTAAAATGATATTAAGACTAA TTGAAGAAAAACCCATGCTACTATATTTCTATGCTACCGAGTGTGAGAGAGTAGCTCTTGAGAAATTCTTTGAGATTTAT ACGAAAGCATTGGGCAAGAGAGGAATTTACATACCAATTCCGAAAAGCATTGTTAAATCTGCCATGCCAAAAGAAATAAG AGGTCTGTTAAAATATGAAGGTACCGTGTACGATTGTAGCGTAAGTAAAAAACTTCTTGGTGAGCTACGGTTTGATGAGA ACGAAGTTTATCAAAATGCTTTATTCTTGAAAGAATTAGATGAGAAAAAGATCCTTATCCCCACTTAA
Upstream 100 bases:
>100_bases GATGTGCCGAGCTCTTCGGACAATTAATTCCTAAGGAGTTAGGGAAACAACAACAATAATTAGGACACAACATTTTATTT TTTCATTTTCATTTTAATTT
Downstream 100 bases:
>100_bases TTTTTCTTAAAATTTCCCATATCATTTCAAGATAAGAAGGATGTGGATACTGGAAATCGAGAAGCTCATCTAAACTTCCC TTAAACTTAATCCCTAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MRILIAGLGFIATHVAEVLSSMHEVTVTYRNLNPVKKVYHEKLEEKGVKLIKLDILSDTERLREEVKKSDVVINFIGEIS GDEKTLYISNVEVPKTIASIIKESENKPIFIHTSGSTYGITGEVKIEKELGEGLNPQSPFEKTKLEGEKVVYSIAKGNFP LIIIRPTLVYGKYSAHIQFVTMYRLAKLGIIPKTGISFMPISANNIGKMILRLIEEKPMLLYFYATECERVALEKFFEIY TKALGKRGIYIPIPKSIVKSAMPKEIRGLLKYEGTVYDCSVSKKLLGELRFDENEVYQNALFLKELDEKKILIPT
Sequences:
>Translated_315_residues MRILIAGLGFIATHVAEVLSSMHEVTVTYRNLNPVKKVYHEKLEEKGVKLIKLDILSDTERLREEVKKSDVVINFIGEIS GDEKTLYISNVEVPKTIASIIKESENKPIFIHTSGSTYGITGEVKIEKELGEGLNPQSPFEKTKLEGEKVVYSIAKGNFP LIIIRPTLVYGKYSAHIQFVTMYRLAKLGIIPKTGISFMPISANNIGKMILRLIEEKPMLLYFYATECERVALEKFFEIY TKALGKRGIYIPIPKSIVKSAMPKEIRGLLKYEGTVYDCSVSKKLLGELRFDENEVYQNALFLKELDEKKILIPT >Mature_315_residues MRILIAGLGFIATHVAEVLSSMHEVTVTYRNLNPVKKVYHEKLEEKGVKLIKLDILSDTERLREEVKKSDVVINFIGEIS GDEKTLYISNVEVPKTIASIIKESENKPIFIHTSGSTYGITGEVKIEKELGEGLNPQSPFEKTKLEGEKVVYSIAKGNFP LIIIRPTLVYGKYSAHIQFVTMYRLAKLGIIPKTGISFMPISANNIGKMILRLIEEKPMLLYFYATECERVALEKFFEIY TKALGKRGIYIPIPKSIVKSAMPKEIRGLLKYEGTVYDCSVSKKLLGELRFDENEVYQNALFLKELDEKKILIPT
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35684; Mature: 35684
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILIAGLGFIATHVAEVLSSMHEVTVTYRNLNPVKKVYHEKLEEKGVKLIKLDILSDTE CEEEEEHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCHH RLREEVKKSDVVINFIGEISGDEKTLYISNVEVPKTIASIIKESENKPIFIHTSGSTYGI HHHHHHHHCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCEEEE TGEVKIEKELGEGLNPQSPFEKTKLEGEKVVYSIAKGNFPLIIIRPTLVYGKYSAHIQFV EEEEEEHHHHCCCCCCCCCCHHHHCCCCCEEEEEECCCCCEEEEECEEEEECHHHEEEHH TMYRLAKLGIIPKTGISFMPISANNIGKMILRLIEEKPMLLYFYATECERVALEKFFEIY HHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHH TKALGKRGIYIPIPKSIVKSAMPKEIRGLLKYEGTVYDCSVSKKLLGELRFDENEVYQNA HHHHCCCCEEEECCHHHHHHCCCHHHHHHHHHCCEEEECCCCHHHHHHCCCCHHHHHHHH LFLKELDEKKILIPT HHHHHCCCCEEECCC >Mature Secondary Structure MRILIAGLGFIATHVAEVLSSMHEVTVTYRNLNPVKKVYHEKLEEKGVKLIKLDILSDTE CEEEEEHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCHH RLREEVKKSDVVINFIGEISGDEKTLYISNVEVPKTIASIIKESENKPIFIHTSGSTYGI HHHHHHHHCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCEEEE TGEVKIEKELGEGLNPQSPFEKTKLEGEKVVYSIAKGNFPLIIIRPTLVYGKYSAHIQFV EEEEEEHHHHCCCCCCCCCCHHHHCCCCCEEEEEECCCCCEEEEECEEEEECHHHEEEHH TMYRLAKLGIIPKTGISFMPISANNIGKMILRLIEEKPMLLYFYATECERVALEKFFEIY HHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHH TKALGKRGIYIPIPKSIVKSAMPKEIRGLLKYEGTVYDCSVSKKLLGELRFDENEVYQNA HHHHCCCCEEEECCHHHHHHCCCHHHHHHHHHCCEEEECCCCHHHHHHCCCCHHHHHHHH LFLKELDEKKILIPT HHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA