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The map label for this gene is fixB [H]

Identifier: 15922107

GI number: 15922107

Start: 1811133

End: 1811981

Strand: Direct

Name: fixB [H]

Synonym: ST1794

Alternate gene names: 15922107

Gene position: 1811133-1811981 (Clockwise)

Preceding gene: 15922106

Following gene: 15922108

Centisome position: 67.21

GC content: 34.39

Gene sequence:

>849_bases
ATGATGAAGATTGTAGTATATTCTGAAGATATAGATTATATAAAGACAGCTGTCTCATATTTTCCTAACGAACATGTCAT
AGGGATAAGTAATAAGACAACCAAAGTTGTAGATGAGTTACATATACTTGATGATATAAATGAGGAATTTATTGCCAATT
ATATAGCATCATTGAAACCTGATGTGGTCATTACTGGAAGTACTAAGAGGGATAAGACTGTAGCTGGGGCAGTTGCTGGT
TTGTTAAGATATCCAATAATAACTGATGTTATCGATCTCTCTAATAATAAAGCTAAAAGAGTAGTTTATAGTGGAATGGG
AATAGCTGAAATTGAGTTTTCTTATCCTGTAGTATTAACAGTAAGTAAGAAAAACGTTGAAGTGAAAGAGAAGGAAAGCA
AAATAATACAAGTTAAAACTGAGATGAAAAGAATTAGAAGAGTTGAAATTAAGAGCAAAGGAGAGAGCACTGTAGATCTT
TCATCTGCACAAATTATTGTATCTGTAGGTAGAGGAATTGGAAGTAAGGAGAATATAAAATATGCTGAAGAATTAGCTAA
GGCTTTAGGAGGAGCATTAGGCGGTAGTAGACCAGTAACTGCAGAACTTGGCTGGTTACCAGAGGATAGGCAAATTGGGT
TATCTGGAAATAAAGTTAAACCGAAGCTTTATATCGCATTGGGAATTTCTGGCCAACCGCAACATTTAGCTGGGATTAAA
GATGCTAAAATTATAGTGGCTGTAAATAAAGATAAATCAGCGCCTATTGTTGAAAATGCTGATTATATCATCATAGGTGA
TGCTATAGAGTTTTGCCAGGTCATGACTGAAAAGGTGAAGAAAAAGTGA

Upstream 100 bases:

>100_bases
TTTCGCCATATGTAATAACTAGGAAAAAGATTATAATTGAAGGTAAAATGGAAGAAGCTGTAGATAAACTTCTCAATTAT
TTATCTCAAGAAGGTGTTTT

Downstream 100 bases:

>100_bases
GTTTTGATGCTGACGTGATAATTGTAGGGGGAGGATTATCTGGGTTATCTGCCGGAATAACTGCAGTAAAAGAGGGTTTG
AACGTTATACTTTTAGAGAG

Product: electron transfer flavoprotein subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MMKIVVYSEDIDYIKTAVSYFPNEHVIGISNKTTKVVDELHILDDINEEFIANYIASLKPDVVITGSTKRDKTVAGAVAG
LLRYPIITDVIDLSNNKAKRVVYSGMGIAEIEFSYPVVLTVSKKNVEVKEKESKIIQVKTEMKRIRRVEIKSKGESTVDL
SSAQIIVSVGRGIGSKENIKYAEELAKALGGALGGSRPVTAELGWLPEDRQIGLSGNKVKPKLYIALGISGQPQHLAGIK
DAKIIVAVNKDKSAPIVENADYIIIGDAIEFCQVMTEKVKKK

Sequences:

>Translated_282_residues
MMKIVVYSEDIDYIKTAVSYFPNEHVIGISNKTTKVVDELHILDDINEEFIANYIASLKPDVVITGSTKRDKTVAGAVAG
LLRYPIITDVIDLSNNKAKRVVYSGMGIAEIEFSYPVVLTVSKKNVEVKEKESKIIQVKTEMKRIRRVEIKSKGESTVDL
SSAQIIVSVGRGIGSKENIKYAEELAKALGGALGGSRPVTAELGWLPEDRQIGLSGNKVKPKLYIALGISGQPQHLAGIK
DAKIIVAVNKDKSAPIVENADYIIIGDAIEFCQVMTEKVKKK
>Mature_282_residues
MMKIVVYSEDIDYIKTAVSYFPNEHVIGISNKTTKVVDELHILDDINEEFIANYIASLKPDVVITGSTKRDKTVAGAVAG
LLRYPIITDVIDLSNNKAKRVVYSGMGIAEIEFSYPVVLTVSKKNVEVKEKESKIIQVKTEMKRIRRVEIKSKGESTVDL
SSAQIIVSVGRGIGSKENIKYAEELAKALGGALGGSRPVTAELGWLPEDRQIGLSGNKVKPKLYIALGISGQPQHLAGIK
DAKIIVAVNKDKSAPIVENADYIIIGDAIEFCQVMTEKVKKK

Specific function: Required for anaerobic carnitine reduction. May bring reductant to CaiA [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI189181759, Length=231, Percent_Identity=35.4978354978355, Blast_Score=117, Evalue=9e-27,
Organism=Homo sapiens, GI4503607, Length=231, Percent_Identity=35.4978354978355, Blast_Score=117, Evalue=9e-27,
Organism=Escherichia coli, GI1786226, Length=231, Percent_Identity=36.7965367965368, Blast_Score=154, Evalue=8e-39,
Organism=Escherichia coli, GI1787990, Length=230, Percent_Identity=34.3478260869565, Blast_Score=131, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI17506929, Length=223, Percent_Identity=36.322869955157, Blast_Score=119, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6325261, Length=224, Percent_Identity=33.9285714285714, Blast_Score=99, Evalue=6e-22,
Organism=Drosophila melanogaster, GI17136898, Length=227, Percent_Identity=34.3612334801762, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24652801, Length=227, Percent_Identity=34.3612334801762, Blast_Score=111, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR018206
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 30829; Mature: 30829

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKIVVYSEDIDYIKTAVSYFPNEHVIGISNKTTKVVDELHILDDINEEFIANYIASLKP
CEEEEEEECCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHCCC
DVVITGSTKRDKTVAGAVAGLLRYPIITDVIDLSNNKAKRVVYSGMGIAEIEFSYPVVLT
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCEEEEE
VSKKNVEVKEKESKIIQVKTEMKRIRRVEIKSKGESTVDLSSAQIIVSVGRGIGSKENIK
EECCCCEEECCCCCEEEEHHHHHHHHEEHCCCCCCCEEECCCCEEEEEECCCCCCCCCCH
YAEELAKALGGALGGSRPVTAELGWLPEDRQIGLSGNKVKPKLYIALGISGQPQHLAGIK
HHHHHHHHHHHHCCCCCCCEEECCCCCCCCEECCCCCCCCCEEEEEEECCCCCHHHCCCC
DAKIIVAVNKDKSAPIVENADYIIIGDAIEFCQVMTEKVKKK
CCEEEEEECCCCCCCEECCCCEEEECCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMKIVVYSEDIDYIKTAVSYFPNEHVIGISNKTTKVVDELHILDDINEEFIANYIASLKP
CEEEEEEECCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHCCC
DVVITGSTKRDKTVAGAVAGLLRYPIITDVIDLSNNKAKRVVYSGMGIAEIEFSYPVVLT
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCEEEEE
VSKKNVEVKEKESKIIQVKTEMKRIRRVEIKSKGESTVDLSSAQIIVSVGRGIGSKENIK
EECCCCEEECCCCCEEEEHHHHHHHHEEHCCCCCCCEEECCCCEEEEEECCCCCCCCCCH
YAEELAKALGGALGGSRPVTAELGWLPEDRQIGLSGNKVKPKLYIALGISGQPQHLAGIK
HHHHHHHHHHHHCCCCCCCEEECCCCCCCCEECCCCCCCCCEEEEEEECCCCCHHHCCCC
DAKIIVAVNKDKSAPIVENADYIIIGDAIEFCQVMTEKVKKK
CCEEEEEECCCCCCCEECCCCEEEECCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA