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The map label for this gene is etfB [H]

Identifier: 15922106

GI number: 15922106

Start: 1810411

End: 1811136

Strand: Direct

Name: etfB [H]

Synonym: ST1793

Alternate gene names: 15922106

Gene position: 1810411-1811136 (Clockwise)

Preceding gene: 15922098

Following gene: 15922107

Centisome position: 67.18

GC content: 33.61

Gene sequence:

>726_bases
ATGAATATAGTAACTTGTTTTAAAATAGTTCCCGACGATACTTTAATTAAAATAGTCGGAGACAAACTAGACTTAAACGT
TCCTCCAAAAATTAGTACATATGATAAAAATGCAATTGAAGAAGCTGTTAGGATAAAGGAGAAATATGGAGGAAAAGCGA
TAGGAGTTACTGCTGGAAATACAGACAGAAAAAGTATTAGAGAAGCACTAGCTATGGGTTTAGATGAGGTAATAGCAATA
AACATGAAGGAGCCAGACGTAATGACAACTGCTGAGGCAATAGCTGAAACTATTTCACCAATAAAACCTGATATAATTCT
TACTGGAGAATCTACCACTGATAGTAGTACATCAGTATTTTCCTCCTATCTCGCTTCACTCTTAAATTATCCCGTAGTCA
CTTATGCTAAGTCGATTACAATTGAAGGTAATAAAGTAAGGGTTGAGAGGAATTTGACAACATTCCAAGAGATTGTAGAG
ACGGATTTACCGGCAATAATTTCCGTTGTAGGTGAGATAAATACTCCTAGAATACCTAGTGTTAAGCAGATACTTGAGTC
GTCAAAAAAGCCAGTGAAAAATATTGATTATAATAAACAGCCAAAGGTGAAAATTGTTAATGTTTCGCCATATGTAATAA
CTAGGAAAAAGATTATAATTGAAGGTAAAATGGAAGAAGCTGTAGATAAACTTCTCAATTATTTATCTCAAGAAGGTGTT
TTATGA

Upstream 100 bases:

>100_bases
TCTATTGACTTTAAAGGGAATACCATCACATATAAATGCATCTAATAACTAAAAAATGTTAAGCAAATAATATTAATGAG
TTAAAATCTTGTATTTTTTG

Downstream 100 bases:

>100_bases
TGAAGATTGTAGTATATTCTGAAGATATAGATTATATAAAGACAGCTGTCTCATATTTTCCTAACGAACATGTCATAGGG
ATAAGTAATAAGACAACCAA

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNIVTCFKIVPDDTLIKIVGDKLDLNVPPKISTYDKNAIEEAVRIKEKYGGKAIGVTAGNTDRKSIREALAMGLDEVIAI
NMKEPDVMTTAEAIAETISPIKPDIILTGESTTDSSTSVFSSYLASLLNYPVVTYAKSITIEGNKVRVERNLTTFQEIVE
TDLPAIISVVGEINTPRIPSVKQILESSKKPVKNIDYNKQPKVKIVNVSPYVITRKKIIIEGKMEEAVDKLLNYLSQEGV
L

Sequences:

>Translated_241_residues
MNIVTCFKIVPDDTLIKIVGDKLDLNVPPKISTYDKNAIEEAVRIKEKYGGKAIGVTAGNTDRKSIREALAMGLDEVIAI
NMKEPDVMTTAEAIAETISPIKPDIILTGESTTDSSTSVFSSYLASLLNYPVVTYAKSITIEGNKVRVERNLTTFQEIVE
TDLPAIISVVGEINTPRIPSVKQILESSKKPVKNIDYNKQPKVKIVNVSPYVITRKKIIIEGKMEEAVDKLLNYLSQEGV
L
>Mature_241_residues
MNIVTCFKIVPDDTLIKIVGDKLDLNVPPKISTYDKNAIEEAVRIKEKYGGKAIGVTAGNTDRKSIREALAMGLDEVIAI
NMKEPDVMTTAEAIAETISPIKPDIILTGESTTDSSTSVFSSYLASLLNYPVVTYAKSITIEGNKVRVERNLTTFQEIVE
TDLPAIISVVGEINTPRIPSVKQILESSKKPVKNIDYNKQPKVKIVNVSPYVITRKKIIIEGKMEEAVDKLLNYLSQEGV
L

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=196, Percent_Identity=29.5918367346939, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI62420877, Length=196, Percent_Identity=29.5918367346939, Blast_Score=83, Evalue=2e-16,
Organism=Escherichia coli, GI2367123, Length=249, Percent_Identity=30.9236947791165, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI87081682, Length=251, Percent_Identity=32.2709163346614, Blast_Score=100, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI25141345, Length=178, Percent_Identity=25.8426966292135, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321646, Length=193, Percent_Identity=26.9430051813472, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26510; Mature: 26510

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVTCFKIVPDDTLIKIVGDKLDLNVPPKISTYDKNAIEEAVRIKEKYGGKAIGVTAGN
CCEEEEEEECCCCEEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCC
TDRKSIREALAMGLDEVIAINMKEPDVMTTAEAIAETISPIKPDIILTGESTTDSSTSVF
CCHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHH
SSYLASLLNYPVVTYAKSITIEGNKVRVERNLTTFQEIVETDLPAIISVVGEINTPRIPS
HHHHHHHHCCCHHHHHEEEEECCCEEEEECCHHHHHHHHHHCHHHHHHHHHCCCCCCCCH
VKQILESSKKPVKNIDYNKQPKVKIVNVSPYVITRKKIIIEGKMEEAVDKLLNYLSQEGV
HHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEECCHHHHHHHHHHHHHHCCC
L
C
>Mature Secondary Structure
MNIVTCFKIVPDDTLIKIVGDKLDLNVPPKISTYDKNAIEEAVRIKEKYGGKAIGVTAGN
CCEEEEEEECCCCEEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCC
TDRKSIREALAMGLDEVIAINMKEPDVMTTAEAIAETISPIKPDIILTGESTTDSSTSVF
CCHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHH
SSYLASLLNYPVVTYAKSITIEGNKVRVERNLTTFQEIVETDLPAIISVVGEINTPRIPS
HHHHHHHHCCCHHHHHEEEEECCCEEEEECCHHHHHHHHHHCHHHHHHHHHCCCCCCCCH
VKQILESSKKPVKNIDYNKQPKVKIVNVSPYVITRKKIIIEGKMEEAVDKLLNYLSQEGV
HHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEECCHHHHHHHHHHHHHHCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA