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The map label for this gene is ygaF [H]

Identifier: 15922097

GI number: 15922097

Start: 1803017

End: 1803484

Strand: Direct

Name: ygaF [H]

Synonym: ST1785

Alternate gene names: 15922097

Gene position: 1803017-1803484 (Clockwise)

Preceding gene: 15922092

Following gene: 15922098

Centisome position: 66.91

GC content: 33.97

Gene sequence:

>468_bases
ATGGTAGAAATAGGAGAGTTAGCCCCAGATTTTGAGTTACCAGATACAGAATTAAAGAAAGTAAAGCTCTCAGCCTTAAA
AGGAAAAGTAGTAGTTCTAGCATTCTATCCAGCGGCTTTTACACAAGTTTGTACTAAGGAAATGTGTACTTTTAGAGATT
CTATGGCGAAATTTAATCAAGTAAATGCTGTAGTACTAGGAATTAGTGTTGATCCTCCATTTAGTAATAAAGCTTTTAAA
GAACATAATAAGCTAAACTTTACCATTTTAAGTGATTATAACAGAGAAGTAGTGAAAAAATATAATGTAGCGTGGGAGTT
TCCAGCACTTCCAGGGTATGTCCTAGCTAAAAGAGCTGTTTTCGTAATAGATAAGGAAGGTAAAGTAAGGTATAAATGGG
TTTCAGACGATCCTACGAAAGAACCGCCCTATGATGAAATTGAAAAAGTTGTAAAATCCTTAAGTTAA

Upstream 100 bases:

>100_bases
TGAAAGTATAATATTAGTTAAAAAGGTTAGCTTTGCATTTATTATAGTTTAAGCATAATTTGAAAGTATATTTATATTCA
TACTCTGTAAGTAGTTATTG

Downstream 100 bases:

>100_bases
GATTTTTTATAGTGACCCCTCTTGTTAAGATCACAACTTTATGTCCCGGGTAATAATGAGAAAATGATTAAGAAAACTGA
AAGTATAAACGCAGACTCTT

Product: bacterioferritin comigratory protein

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MVEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFK
EHNKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSLS

Sequences:

>Translated_155_residues
MVEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFK
EHNKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSLS
>Mature_155_residues
MVEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFK
EHNKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSLS

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI32189392, Length=163, Percent_Identity=35.5828220858896, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI32483377, Length=147, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI4505591, Length=163, Percent_Identity=33.7423312883436, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI32455266, Length=163, Percent_Identity=33.7423312883436, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI32455264, Length=163, Percent_Identity=33.7423312883436, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI5802974, Length=147, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI5453549, Length=148, Percent_Identity=31.7567567567568, Blast_Score=71, Evalue=5e-13,
Organism=Homo sapiens, GI33188454, Length=84, Percent_Identity=44.047619047619, Blast_Score=65, Evalue=3e-11,
Organism=Escherichia coli, GI1788825, Length=132, Percent_Identity=37.1212121212121, Blast_Score=95, Evalue=2e-21,
Organism=Escherichia coli, GI1787584, Length=158, Percent_Identity=36.7088607594937, Blast_Score=71, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI32565831, Length=162, Percent_Identity=34.5679012345679, Blast_Score=79, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI193204376, Length=162, Percent_Identity=34.5679012345679, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6323613, Length=148, Percent_Identity=33.1081081081081, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320661, Length=146, Percent_Identity=30.8219178082192, Blast_Score=62, Evalue=4e-11,
Organism=Drosophila melanogaster, GI17738015, Length=164, Percent_Identity=29.8780487804878, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21357347, Length=146, Percent_Identity=32.1917808219178, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24656348, Length=161, Percent_Identity=34.1614906832298, Blast_Score=74, Evalue=3e-14,
Organism=Drosophila melanogaster, GI17864676, Length=161, Percent_Identity=34.1614906832298, Blast_Score=74, Evalue=3e-14,
Organism=Drosophila melanogaster, GI17157991, Length=128, Percent_Identity=33.59375, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24641739, Length=128, Percent_Identity=33.59375, Blast_Score=70, Evalue=8e-13,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17598; Mature: 17598

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQ
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCC
VNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAV
CEEEEEEEECCCCCCCCCHHCCCCEEEEEECCCCHHHHHHHCCEEECCCCCHHHHHCEEE
FVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSLS
EEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MVEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQ
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCC
VNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAV
CEEEEEEEECCCCCCCCCHHCCCCEEEEEECCCCHHHHHHHCCEEECCCCCHHHHHCEEE
FVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSLS
EEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]