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The map label for this gene is 15921800

Identifier: 15921800

GI number: 15921800

Start: 1504873

End: 1505460

Strand: Reverse

Name: 15921800

Synonym: ST1506

Alternate gene names: NA

Gene position: 1505460-1504873 (Counterclockwise)

Preceding gene: 15921802

Following gene: 15921785

Centisome position: 55.87

GC content: 31.29

Gene sequence:

>588_bases
ATGCTTACTGAGGAAATCAAAGAGTACATAGATAAGATAACTCCTAAATTACAAGAAAGATTCGATAAAAGAGAAAAAGT
CTTACTTATTGCAAGAGAAGTAATTAGATATTCTGGAGAAACAATATCTTTATCTCATAGATTAAAAAAGAAAGAAGCAG
AAGAAAAATATAAGGTTGCATTACAAAAATTGGAAGAATTAAAGAAAATAATAGATGAATACCCAGAGTTATTGTACGGT
GATGTTGGTACAGCTTACCAAGAAATTTCTGAAGCTAGTATAGTCTATTCAATGTACTTCGGAGAGAAACTAAAGACTGC
AGAAGATTTAGGAATTCCAGAGATTTATTATATTCTTGGTATTGCAGATGCTATTGGGGAAATGAGAAGAAGAGTGTTAG
AGTTACTTAGAAAAGACGATAAGATTGAAGCCGAGAATACTTATAAGATGATGGAAGAGTTATATGAAATATTGTGGACT
TTAGAGTACCCAAAGGCTGTAGTTCCAGGGTTAAGACAAAAAATTGACAATCTCAGAAGACTTTTAGAAGAAACAAATCA
TGATTTATTCTTAGCTCATTTAGAGTAG

Upstream 100 bases:

>100_bases
AAGATTTAAAAAGTATAAGTAGTATAAGTAGTTTTCTTTCAGCTAATGAGAATCTCTATATCAATGAATAGTTTTAATTA
TTTAACTCGAATTCTATCCT

Downstream 100 bases:

>100_bases
TTTTCTTTTATATATTCAACTAGCTTTTGTGCAACATTTATATTAGTTGCTACCATGAAACCCTTGAACTCTGGTACATC
ATTTAATTCGTTAACTACAT

Product: haloacid dehalogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MLTEEIKEYIDKITPKLQERFDKREKVLLIAREVIRYSGETISLSHRLKKKEAEEKYKVALQKLEELKKIIDEYPELLYG
DVGTAYQEISEASIVYSMYFGEKLKTAEDLGIPEIYYILGIADAIGEMRRRVLELLRKDDKIEAENTYKMMEELYEILWT
LEYPKAVVPGLRQKIDNLRRLLEETNHDLFLAHLE

Sequences:

>Translated_195_residues
MLTEEIKEYIDKITPKLQERFDKREKVLLIAREVIRYSGETISLSHRLKKKEAEEKYKVALQKLEELKKIIDEYPELLYG
DVGTAYQEISEASIVYSMYFGEKLKTAEDLGIPEIYYILGIADAIGEMRRRVLELLRKDDKIEAENTYKMMEELYEILWT
LEYPKAVVPGLRQKIDNLRRLLEETNHDLFLAHLE
>Mature_195_residues
MLTEEIKEYIDKITPKLQERFDKREKVLLIAREVIRYSGETISLSHRLKKKEAEEKYKVALQKLEELKKIIDEYPELLYG
DVGTAYQEISEASIVYSMYFGEKLKTAEDLGIPEIYYILGIADAIGEMRRRVLELLRKDDKIEAENTYKMMEELYEILWT
LEYPKAVVPGLRQKIDNLRRLLEETNHDLFLAHLE

Specific function: Unknown

COG id: COG2178

COG function: function code J; Predicted RNA-binding protein of the translin family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002848
- InterPro:   IPR016069
- InterPro:   IPR016068 [H]

Pfam domain/function: PF01997 Translin [H]

EC number: NA

Molecular weight: Translated: 23092; Mature: 23092

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTEEIKEYIDKITPKLQERFDKREKVLLIAREVIRYSGETISLSHRLKKKEAEEKYKVA
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHH
LQKLEELKKIIDEYPELLYGDVGTAYQEISEASIVYSMYFGEKLKTAEDLGIPEIYYILG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IADAIGEMRRRVLELLRKDDKIEAENTYKMMEELYEILWTLEYPKAVVPGLRQKIDNLRR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LLEETNHDLFLAHLE
HHHHCCCCEEEEECC
>Mature Secondary Structure
MLTEEIKEYIDKITPKLQERFDKREKVLLIAREVIRYSGETISLSHRLKKKEAEEKYKVA
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHH
LQKLEELKKIIDEYPELLYGDVGTAYQEISEASIVYSMYFGEKLKTAEDLGIPEIYYILG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IADAIGEMRRRVLELLRKDDKIEAENTYKMMEELYEILWTLEYPKAVVPGLRQKIDNLRR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LLEETNHDLFLAHLE
HHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]